RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PRAM1Q96QH2 718 aa13.63□□□□□ -0.23
APOBEC3F-201ENST00000308521 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
APOBEC3F-201ENST00000308521 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
APOBEC3F-201ENST00000308521 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
APOBEC3F-201ENST00000308521 ZFYVE9O95405 1425 aa13.62□□□□□ -0.23
APOBEC3F-201ENST00000308521 RALBP1Q15311 655 aa13.62□□□□□ -0.23
APOBEC3F-201ENST00000308521 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
APOBEC3F-201ENST00000308521 POGKQ9P215 609 aa13.62□□□□□ -0.23
APOBEC3F-201ENST00000308521 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
APOBEC3F-201ENST00000308521 NBR1Q14596 966 aa13.61□□□□□ -0.23
APOBEC3F-201ENST00000308521 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
APOBEC3F-201ENST00000308521 ASXL1Q8IXJ9 1541 aa13.6□□□□□ -0.23
APOBEC3F-201ENST00000308521 LTKP29376 864 aa13.6□□□□□ -0.23
APOBEC3F-201ENST00000308521 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
APOBEC3F-201ENST00000308521 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
APOBEC3F-201ENST00000308521 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
APOBEC3F-201ENST00000308521 RRP1P56182 461 aaKnown RBP13.59□□□□□ -0.23
APOBEC3F-201ENST00000308521 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
APOBEC3F-201ENST00000308521 ALKQ9UM73 1620 aa13.58□□□□□ -0.24
APOBEC3F-201ENST00000308521 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
APOBEC3F-201ENST00000308521 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
APOBEC3F-201ENST00000308521 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 TXNDC2Q86VQ3 553 aa13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 METP08581 1390 aa13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
APOBEC3F-201ENST00000308521 PTPRMP28827 1452 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 MS4A1P11836 297 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 INSRP06213 1382 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 PLEKHH1Q9ULM0 1364 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
APOBEC3F-201ENST00000308521 KDM5AP29375 1690 aaKnown RBP13.55□□□□□ -0.24
APOBEC3F-201ENST00000308521 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
APOBEC3F-201ENST00000308521 TNNT2P45379 298 aaPredicted RBP13.55□□□□□ -0.24
APOBEC3F-201ENST00000308521 HDGFP51858 240 aaKnown RBP13.55□□□□□ -0.24
APOBEC3F-201ENST00000308521 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
APOBEC3F-201ENST00000308521 FER1L4A9Z1Z3 1794 aa13.54□□□□□ -0.24
APOBEC3F-201ENST00000308521 C3P01024 1663 aa13.54□□□□□ -0.24
APOBEC3F-201ENST00000308521 MYO3AQ8NEV4 1616 aa13.54□□□□□ -0.24
APOBEC3F-201ENST00000308521 MYOM1P52179 1685 aa13.54□□□□□ -0.24
APOBEC3F-201ENST00000308521 IL27Q8NEV9 243 aa13.54□□□□□ -0.24
APOBEC3F-201ENST00000308521 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
APOBEC3F-201ENST00000308521 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
APOBEC3F-201ENST00000308521 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.24
APOBEC3F-201ENST00000308521 PPP2R1AP30153 589 aa13.52□□□□□ -0.25
APOBEC3F-201ENST00000308521 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.25
APOBEC3F-201ENST00000308521 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
APOBEC3F-201ENST00000308521 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
APOBEC3F-201ENST00000308521 PDE4AP27815 886 aa13.51□□□□□ -0.25
APOBEC3F-201ENST00000308521 GLIPR1L2Q4G1C9 344 aa13.51□□□□□ -0.25
APOBEC3F-201ENST00000308521 BACH2Q9BYV9 841 aa13.51□□□□□ -0.25
APOBEC3F-201ENST00000308521 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
APOBEC3F-201ENST00000308521 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3F-201ENST00000308521 THEMISQ8N1K5 641 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3F-201ENST00000308521 NRXN3Q9Y4C0 1643 aa13.49□□□□□ -0.25
APOBEC3F-201ENST00000308521 NLRP1Q9C000 1473 aa13.49□□□□□ -0.25
APOBEC3F-201ENST00000308521 NCKAP5LQ9HCH0 1330 aa13.49□□□□□ -0.25
APOBEC3F-201ENST00000308521 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
APOBEC3F-201ENST00000308521 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
APOBEC3F-201ENST00000308521 CABP1Q9NZU7 370 aa13.48□□□□□ -0.25
APOBEC3F-201ENST00000308521 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
APOBEC3F-201ENST00000308521 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
APOBEC3F-201ENST00000308521 ABCC11Q96J66 1382 aa13.47□□□□□ -0.25
APOBEC3F-201ENST00000308521 RIMS1Q86UR5 1692 aaKnown RBP13.47□□□□□ -0.25
APOBEC3F-201ENST00000308521 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-201ENST00000308521 ADAMTS13Q76LX8 1427 aa13.46□□□□□ -0.25
APOBEC3F-201ENST00000308521 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3F-201ENST00000308521 MORC1Q86VD1 984 aa13.46□□□□□ -0.25
APOBEC3F-201ENST00000308521 SETD1AO15047 1707 aaKnown RBP13.45□□□□□ -0.26
APOBEC3F-201ENST00000308521 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
APOBEC3F-201ENST00000308521 ROBO2Q9HCK4 1378 aa13.44□□□□□ -0.26
APOBEC3F-201ENST00000308521 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
APOBEC3F-201ENST00000308521 AMOTL2Q9Y2J4 779 aa13.44□□□□□ -0.26
APOBEC3F-201ENST00000308521 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
APOBEC3F-201ENST00000308521 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
APOBEC3F-201ENST00000308521 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
APOBEC3F-201ENST00000308521 NPM2Q86SE8 214 aaKnown RBP13.43□□□□□ -0.26
APOBEC3F-201ENST00000308521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
APOBEC3F-201ENST00000308521 RBM33Q96EV2 1170 aaKnown RBP13.43□□□□□ -0.26
APOBEC3F-201ENST00000308521 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
APOBEC3F-201ENST00000308521 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
APOBEC3F-201ENST00000308521 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
APOBEC3F-201ENST00000308521 CGNL1Q0VF96 1302 aa13.42□□□□□ -0.26
APOBEC3F-201ENST00000308521 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
APOBEC3F-201ENST00000308521 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
APOBEC3F-201ENST00000308521 NPC1L1Q9UHC9 1359 aa13.41□□□□□ -0.26
APOBEC3F-201ENST00000308521 NEFMP07197 916 aa13.41□□□□□ -0.26
APOBEC3F-201ENST00000308521 FBLN1P23142 703 aa13.41□□□□□ -0.26
APOBEC3F-201ENST00000308521 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
APOBEC3F-201ENST00000308521 TERF2IPQ9NYB0 399 aa13.41□□□□□ -0.26
APOBEC3F-201ENST00000308521 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
APOBEC3F-201ENST00000308521 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
APOBEC3F-201ENST00000308521 CDCA7LQ96GN5 454 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms