RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 MINK1Q8N4C8 1332 aaPredicted RBP22.79■■□□□ 1.24
RETREG1-201ENST00000306320 UHRF1BP1LA0JNW5 1464 aa22.78■■□□□ 1.24
RETREG1-201ENST00000306320 EIF3AQ14152 1382 aaKnown RBP22.78■■□□□ 1.24
RETREG1-201ENST00000306320 MYH16Q9H6N6 1097 aa22.77■■□□□ 1.24
RETREG1-201ENST00000306320 MTHFSP49914 203 aa22.76■■□□□ 1.23
RETREG1-201ENST00000306320 IDI1Q13907 227 aa22.76■■□□□ 1.23
RETREG1-201ENST00000306320 TBC1D2Q9BYX2 928 aa22.76■■□□□ 1.23
RETREG1-201ENST00000306320 RTEL1-TNFRSF6BF6WH68 1400 aa22.76■■□□□ 1.23
RETREG1-201ENST00000306320 U2SURPO15042 1029 aaKnown RBP22.76■■□□□ 1.23
RETREG1-201ENST00000306320 GGNBP2Q9H3C7 697 aa22.76■■□□□ 1.23
RETREG1-201ENST00000306320 TNNQ9UQP3 1299 aa22.75■■□□□ 1.23
RETREG1-201ENST00000306320 PTPRTO14522 1441 aa22.74■■□□□ 1.23
RETREG1-201ENST00000306320 TRAK2O60296 914 aa22.74■■□□□ 1.23
RETREG1-201ENST00000306320 MADDQ8WXG6 1647 aa22.74■■□□□ 1.23
RETREG1-201ENST00000306320 NSD3Q9BZ95 1437 aa22.73■■□□□ 1.23
RETREG1-201ENST00000306320 TRPM2O94759 1503 aa22.72■■□□□ 1.23
RETREG1-201ENST00000306320 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
RETREG1-201ENST00000306320 RBM10P98175 930 aaKnown RBP22.72■■□□□ 1.23
RETREG1-201ENST00000306320 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
RETREG1-201ENST00000306320 SLFN5Q08AF3 891 aa22.72■■□□□ 1.23
RETREG1-201ENST00000306320 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
RETREG1-201ENST00000306320 USP19O94966 1318 aa22.71■■□□□ 1.23
RETREG1-201ENST00000306320 MCM4P33991 863 aa22.7■■□□□ 1.22
RETREG1-201ENST00000306320 BLMP54132 1417 aaPredicted RBP22.69■■□□□ 1.22
RETREG1-201ENST00000306320 NPATQ14207 1427 aa22.69■■□□□ 1.22
RETREG1-201ENST00000306320 ERVK-7P63135 1459 aa22.68■■□□□ 1.22
RETREG1-201ENST00000306320 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
RETREG1-201ENST00000306320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.67■■□□□ 1.22
RETREG1-201ENST00000306320 TCP11L2Q8N4U5 519 aa22.67■■□□□ 1.22
RETREG1-201ENST00000306320 C14orf93Q9H972 538 aaKnown RBP22.67■■□□□ 1.22
RETREG1-201ENST00000306320 SPHKAPQ2M3C7 1700 aa22.67■■□□□ 1.22
RETREG1-201ENST00000306320 FAM69CQ0P6D2 419 aa22.67■■□□□ 1.22
RETREG1-201ENST00000306320 ESPNB1AK53 854 aa22.65■■□□□ 1.22
RETREG1-201ENST00000306320 NCLP19338 710 aaKnown RBP22.65■■□□□ 1.22
RETREG1-201ENST00000306320 PDZRN3Q9UPQ7 1066 aa22.65■■□□□ 1.22
RETREG1-201ENST00000306320 PRAM1Q96QH2 718 aa22.64■■□□□ 1.21
RETREG1-201ENST00000306320 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
RETREG1-201ENST00000306320 WWC1Q8IX03 1113 aa22.63■■□□□ 1.21
RETREG1-201ENST00000306320 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
RETREG1-201ENST00000306320 GRPEL1Q9HAV7 217 aa22.63■■□□□ 1.21
RETREG1-201ENST00000306320 CLCN1P35523 988 aa22.62■■□□□ 1.21
RETREG1-201ENST00000306320 WAPLQ7Z5K2 1190 aa22.61■■□□□ 1.21
RETREG1-201ENST00000306320 ZNF518AQ6AHZ1 1483 aa22.61■■□□□ 1.21
RETREG1-201ENST00000306320 A0A0U1RQG5 324 aaPredicted RBP22.61■■□□□ 1.21
RETREG1-201ENST00000306320 RRP9O43818 475 aaKnown RBP22.61■■□□□ 1.21
RETREG1-201ENST00000306320 ERBB4Q15303 1308 aa22.6■■□□□ 1.21
RETREG1-201ENST00000306320 MAPK8IP3Q9UPT6 1336 aa22.6■■□□□ 1.21
RETREG1-201ENST00000306320 VGFO15240 615 aaPredicted RBP22.6■■□□□ 1.21
RETREG1-201ENST00000306320 HSCBQ8IWL3 235 aa22.6■■□□□ 1.21
RETREG1-201ENST00000306320 YEATS2Q9ULM3 1422 aa22.59■■□□□ 1.21
RETREG1-201ENST00000306320 FAM13BQ9NYF5 915 aa22.59■■□□□ 1.21
RETREG1-201ENST00000306320 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
RETREG1-201ENST00000306320 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
RETREG1-201ENST00000306320 CEP152O94986 1710 aa22.59■■□□□ 1.21
RETREG1-201ENST00000306320 PCDHB15Q9Y5E8 787 aa22.58■■□□□ 1.21
RETREG1-201ENST00000306320 TET3O43151 1660 aa22.58■■□□□ 1.21
RETREG1-201ENST00000306320 ABCA6Q8N139 1617 aa22.58■■□□□ 1.2
RETREG1-201ENST00000306320 C22orf23Q9BZE7 217 aa22.58■■□□□ 1.2
RETREG1-201ENST00000306320 KIDINS220Q9ULH0 1771 aa22.57■■□□□ 1.2
RETREG1-201ENST00000306320 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
RETREG1-201ENST00000306320 HSP90AB1P08238 724 aaKnown RBP22.57■■□□□ 1.2
RETREG1-201ENST00000306320 MRE11P49959 708 aa22.57■■□□□ 1.2
RETREG1-201ENST00000306320 ANTXR1Q9H6X2 564 aa22.57■■□□□ 1.2
RETREG1-201ENST00000306320 INO80Q9ULG1 1556 aaPredicted RBP22.57■■□□□ 1.2
RETREG1-201ENST00000306320 E9PSI1 815 aa22.56■■□□□ 1.2
RETREG1-201ENST00000306320 STAC3Q96MF2 364 aa22.56■■□□□ 1.2
RETREG1-201ENST00000306320 EVC2Q86UK5 1308 aa22.56■■□□□ 1.2
RETREG1-201ENST00000306320 CHMP5Q9NZZ3 219 aa22.56■■□□□ 1.2
RETREG1-201ENST00000306320 CGNL1Q0VF96 1302 aa22.56■■□□□ 1.2
RETREG1-201ENST00000306320 ABCA9Q8IUA7 1624 aa22.56■■□□□ 1.2
RETREG1-201ENST00000306320 SOX12O15370 315 aa22.55■■□□□ 1.2
RETREG1-201ENST00000306320 RNF17Q9BXT8 1623 aaKnown RBP22.55■■□□□ 1.2
RETREG1-201ENST00000306320 MROH1Q8NDA8 1641 aa22.55■■□□□ 1.2
RETREG1-201ENST00000306320 FTSJ3Q8IY81 847 aaKnown RBP22.55■■□□□ 1.2
RETREG1-201ENST00000306320 MROH2AA6NES4 1674 aa22.55■■□□□ 1.2
RETREG1-201ENST00000306320 KIAA1211Q6ZU35 1233 aa22.55■■□□□ 1.2
RETREG1-201ENST00000306320 IQGAP1P46940 1657 aa22.54■■□□□ 1.2
RETREG1-201ENST00000306320 TBC1D32Q96NH3 1257 aa22.54■■□□□ 1.2
RETREG1-201ENST00000306320 NCKAP5LQ9HCH0 1330 aa22.54■■□□□ 1.2
RETREG1-201ENST00000306320 RLBP1P12271 317 aa22.54■■□□□ 1.2
RETREG1-201ENST00000306320 TPRNQ4KMQ1 711 aa22.54■■□□□ 1.2
RETREG1-201ENST00000306320 CABP1Q9NZU7 370 aa22.54■■□□□ 1.2
RETREG1-201ENST00000306320 POGZQ7Z3K3 1410 aa22.54■■□□□ 1.2
RETREG1-201ENST00000306320 CFAP53Q96M91 514 aa22.53■■□□□ 1.2
RETREG1-201ENST00000306320 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.2
RETREG1-201ENST00000306320 ANP32BQ92688 251 aaKnown RBP22.52■■□□□ 1.2
RETREG1-201ENST00000306320 RUNDC1Q96C34 613 aa22.52■■□□□ 1.2
RETREG1-201ENST00000306320 MAP3K4Q9Y6R4 1608 aa22.52■■□□□ 1.19
RETREG1-201ENST00000306320 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
RETREG1-201ENST00000306320 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
RETREG1-201ENST00000306320 ELL2O00472 640 aaPredicted RBP22.49■■□□□ 1.19
RETREG1-201ENST00000306320 LAMC1P11047 1609 aa22.49■■□□□ 1.19
RETREG1-201ENST00000306320 HMOX1P09601 288 aa22.49■■□□□ 1.19
RETREG1-201ENST00000306320 GAS2L3Q86XJ1 694 aa22.49■■□□□ 1.19
RETREG1-201ENST00000306320 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
RETREG1-201ENST00000306320 SYNMO15061 1565 aa22.48■■□□□ 1.19
RETREG1-201ENST00000306320 MSNP26038 577 aaKnown RBP22.48■■□□□ 1.19
RETREG1-201ENST00000306320 R3HCC1Q9Y3T6 440 aaKnown RBP22.48■■□□□ 1.19
RETREG1-201ENST00000306320 PMFBP1Q8TBY8 1022 aa22.48■■□□□ 1.19
RETREG1-201ENST00000306320 THUMPD2Q9BTF0 503 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms