RNA–Protein interactions for RNA: ENST00000303757.12

LST1-202, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-202ENST00000303757 XRN1Q8IZH2 1706 aaKnown RBP24.29■■□□□ 1.48
LST1-202ENST00000303757 NRXN3Q9Y4C0 1643 aa24.28■■□□□ 1.48
LST1-202ENST00000303757 RGS12O14924 1447 aa24.28■■□□□ 1.48
LST1-202ENST00000303757 MST1RQ04912 1400 aa24.28■■□□□ 1.48
LST1-202ENST00000303757 SETD5Q9C0A6 1442 aa24.27■■□□□ 1.48
LST1-202ENST00000303757 QTRT2Q9H974 415 aaKnown RBP24.27■■□□□ 1.48
LST1-202ENST00000303757 IQGAP3Q86VI3 1631 aa24.27■■□□□ 1.48
LST1-202ENST00000303757 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
LST1-202ENST00000303757 DCCP43146 1447 aa24.25■■□□□ 1.47
LST1-202ENST00000303757 RBM6P78332 1123 aaKnown RBP24.23■■□□□ 1.47
LST1-202ENST00000303757 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
LST1-202ENST00000303757 ADAMTS2O95450 1211 aa24.22■■□□□ 1.47
LST1-202ENST00000303757 NUP155O75694 1391 aa24.21■■□□□ 1.47
LST1-202ENST00000303757 METP08581 1390 aa24.21■■□□□ 1.47
LST1-202ENST00000303757 ZNF326Q5BKZ1 582 aaKnown RBP24.21■■□□□ 1.47
LST1-202ENST00000303757 NALCNQ8IZF0 1738 aa24.21■■□□□ 1.47
LST1-202ENST00000303757 PITPNM1O00562 1244 aa24.19■■□□□ 1.46
LST1-202ENST00000303757 NGLY1Q96IV0 654 aa24.19■■□□□ 1.46
LST1-202ENST00000303757 SETBP1Q9Y6X0 1596 aa24.19■■□□□ 1.46
LST1-202ENST00000303757 ITGAEP38570 1179 aa24.17■■□□□ 1.46
LST1-202ENST00000303757 SPHKAPQ2M3C7 1700 aa24.17■■□□□ 1.46
LST1-202ENST00000303757 CHRDL2Q6WN34 429 aa24.16■■□□□ 1.46
LST1-202ENST00000303757 ADGRL3Q9HAR2 1447 aa24.16■■□□□ 1.46
LST1-202ENST00000303757 ROCK1Q13464 1354 aa24.11■■□□□ 1.45
LST1-202ENST00000303757 USP21Q9UK80 565 aa24.1■■□□□ 1.45
LST1-202ENST00000303757 C1orf167Q5SNV9 1468 aa24.1■■□□□ 1.45
LST1-202ENST00000303757 FKBP8Q14318 412 aa24.09■■□□□ 1.45
LST1-202ENST00000303757 SPDYE1Q8NFV5 336 aaPredicted RBP24.09■■□□□ 1.45
LST1-202ENST00000303757 ORAI2Q96SN7 254 aa24.09■■□□□ 1.45
LST1-202ENST00000303757 ATAD2Q6PL18 1390 aa24.08■■□□□ 1.45
LST1-202ENST00000303757 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
LST1-202ENST00000303757 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
LST1-202ENST00000303757 PROM2Q8N271 834 aa24.04■■□□□ 1.44
LST1-202ENST00000303757 TRPC5Q9UL62 973 aaPredicted RBP24.04■■□□□ 1.44
LST1-202ENST00000303757 KIF1BO60333 1816 aa24.03■■□□□ 1.44
LST1-202ENST00000303757 LAMC1P11047 1609 aa24.03■■□□□ 1.44
LST1-202ENST00000303757 SOS2Q07890 1332 aaPredicted RBP24.02■■□□□ 1.44
LST1-202ENST00000303757 ZRANB1Q9UGI0 708 aa24.01■■□□□ 1.43
LST1-202ENST00000303757 ROBO2Q9HCK4 1378 aa24.01■■□□□ 1.43
LST1-202ENST00000303757 ATRNO75882 1429 aa23.99■■□□□ 1.43
LST1-202ENST00000303757 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
LST1-202ENST00000303757 FNBP4Q8N3X1 1017 aaPredicted RBP23.98■■□□□ 1.43
LST1-202ENST00000303757 PTCH1Q13635 1447 aa23.98■■□□□ 1.43
LST1-202ENST00000303757 CLEC11AQ9Y240 323 aa23.97■■□□□ 1.43
LST1-202ENST00000303757 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.43
LST1-202ENST00000303757 XPCQ01831 940 aaPredicted RBP23.95■■□□□ 1.42
LST1-202ENST00000303757 MARF1Q9Y4F3 1742 aaKnown RBP23.95■■□□□ 1.42
LST1-202ENST00000303757 ESCO1Q5FWF5 840 aa23.91■■□□□ 1.42
LST1-202ENST00000303757 BCL9LQ86UU0 1499 aa23.91■■□□□ 1.42
LST1-202ENST00000303757 MYOM2P54296 1465 aa23.9■■□□□ 1.42
LST1-202ENST00000303757 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
LST1-202ENST00000303757 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
LST1-202ENST00000303757 FOXO3O43524 673 aa23.87■■□□□ 1.41
LST1-202ENST00000303757 GJD4Q96KN9 370 aaPredicted RBP23.87■■□□□ 1.41
LST1-202ENST00000303757 PXDNQ92626 1479 aa23.87■■□□□ 1.41
LST1-202ENST00000303757 NPHP3Q7Z494 1330 aa23.85■■□□□ 1.41
LST1-202ENST00000303757 PPLO60437 1756 aa23.85■■□□□ 1.41
LST1-202ENST00000303757 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
LST1-202ENST00000303757 BRWD3Q6RI45 1802 aa23.84■■□□□ 1.41
LST1-202ENST00000303757 CCDC125Q86Z20 511 aa23.84■■□□□ 1.41
LST1-202ENST00000303757 SRCAPQ6ZRS2 3230 aa23.84■■□□□ 1.41
LST1-202ENST00000303757 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
LST1-202ENST00000303757 GLI3P10071 1580 aa23.82■■□□□ 1.4
LST1-202ENST00000303757 FXR2P51116 673 aaKnown RBP eCLIP23.81■■□□□ 1.4
LST1-202ENST00000303757 POTEHQ6S545 545 aa23.81■■□□□ 1.4
LST1-202ENST00000303757 DEFB132Q7Z7B7 95 aa23.81■■□□□ 1.4
LST1-202ENST00000303757 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.81■■□□□ 1.4
LST1-202ENST00000303757 PLEKHG5O94827 1062 aa23.8■■□□□ 1.4
LST1-202ENST00000303757 PRAG1Q86YV5 1406 aa23.8■■□□□ 1.4
LST1-202ENST00000303757 PIP4P2Q8N4L2 257 aa23.8■■□□□ 1.4
LST1-202ENST00000303757 STK26Q9P289 416 aa23.8■■□□□ 1.4
LST1-202ENST00000303757 WAPLQ7Z5K2 1190 aa23.79■■□□□ 1.4
LST1-202ENST00000303757 RALGAPBQ86X10 1494 aa23.79■■□□□ 1.4
LST1-202ENST00000303757 NAIPQ13075 1403 aa23.78■■□□□ 1.4
LST1-202ENST00000303757 EP400Q96L91 3159 aa23.77■■□□□ 1.4
LST1-202ENST00000303757 UNC5CLQ8IV45 518 aa23.77■■□□□ 1.4
LST1-202ENST00000303757 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
LST1-202ENST00000303757 BLMP54132 1417 aaPredicted RBP23.76■■□□□ 1.39
LST1-202ENST00000303757 SLIT2O94813 1529 aa23.74■■□□□ 1.39
LST1-202ENST00000303757 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
LST1-202ENST00000303757 ADGRF5Q8IZF2 1346 aa23.72■■□□□ 1.39
LST1-202ENST00000303757 PLEKHH1Q9ULM0 1364 aa23.72■■□□□ 1.39
LST1-202ENST00000303757 USP32Q8NFA0 1604 aa23.72■■□□□ 1.39
LST1-202ENST00000303757 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
LST1-202ENST00000303757 FMN2Q9NZ56 1722 aa23.71■■□□□ 1.39
LST1-202ENST00000303757 SPATA31A3Q5VYP0 1347 aa23.71■■□□□ 1.39
LST1-202ENST00000303757 PRR29P0C7W0 189 aa23.71■■□□□ 1.39
LST1-202ENST00000303757 SF3B2Q13435 895 aaKnown RBP23.71■■□□□ 1.39
LST1-202ENST00000303757 SEPT12Q8IYM1 358 aa23.71■■□□□ 1.39
LST1-202ENST00000303757 HAP1P54257 671 aaPredicted RBP23.7■■□□□ 1.38
LST1-202ENST00000303757 TMEM132EQ6IEE7 984 aa23.7■■□□□ 1.38
LST1-202ENST00000303757 CABLES1Q8TDN4 633 aa23.7■■□□□ 1.38
LST1-202ENST00000303757 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
LST1-202ENST00000303757 PLCH1Q4KWH8 1693 aa23.68■■□□□ 1.38
LST1-202ENST00000303757 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
LST1-202ENST00000303757 KRT28Q7Z3Y7 464 aa23.68■■□□□ 1.38
LST1-202ENST00000303757 KIF1AQ12756 1690 aa23.67■■□□□ 1.38
LST1-202ENST00000303757 PSDA5PKW4 1024 aaPredicted RBP23.66■■□□□ 1.38
LST1-202ENST00000303757 RRBP1Q9P2E9 1410 aaKnown RBP23.66■■□□□ 1.38
LST1-202ENST00000303757 KNDC1Q76NI1 1749 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms