RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.34■■□□□ 1.65
LTBP3-201ENST00000301873 GOLGA6L19H0YKK7 550 aa25.34■■□□□ 1.65
LTBP3-201ENST00000301873 UBTFL1P0CB47 393 aaPredicted RBP25.34■■□□□ 1.65
LTBP3-201ENST00000301873 TWISTNBQ3B726 338 aaPredicted RBP25.34■■□□□ 1.65
LTBP3-201ENST00000301873 RAPGEF3O95398 923 aa25.33■■□□□ 1.65
LTBP3-201ENST00000301873 G3V3G9 751 aa25.33■■□□□ 1.65
LTBP3-201ENST00000301873 DCAF8Q5TAQ9 597 aa25.33■■□□□ 1.65
LTBP3-201ENST00000301873 TOPBP1Q92547 1522 aa25.33■■□□□ 1.64
LTBP3-201ENST00000301873 CPLX2Q6PUV4 134 aaKnown RBP25.32■■□□□ 1.64
LTBP3-201ENST00000301873 SURF6O75683 361 aaKnown RBP25.32■■□□□ 1.64
LTBP3-201ENST00000301873 CDC45O75419 566 aa25.31■■□□□ 1.64
LTBP3-201ENST00000301873 NUCB2P80303 420 aa25.31■■□□□ 1.64
LTBP3-201ENST00000301873 SULT6B1Q6IMI4 303 aa25.31■■□□□ 1.64
LTBP3-201ENST00000301873 RIC3Q7Z5B4 369 aa25.31■■□□□ 1.64
LTBP3-201ENST00000301873 ABTB2Q8N961 1025 aa25.31■■□□□ 1.64
LTBP3-201ENST00000301873 NOB1Q9ULX3 412 aaKnown RBP25.31■■□□□ 1.64
LTBP3-201ENST00000301873 CPLX1O14810 134 aa25.3■■□□□ 1.64
LTBP3-201ENST00000301873 BACH2Q9BYV9 841 aa25.3■■□□□ 1.64
LTBP3-201ENST00000301873 SMC3Q9UQE7 1217 aa25.3■■□□□ 1.64
LTBP3-201ENST00000301873 PES1O00541 588 aaKnown RBP25.3■■□□□ 1.64
LTBP3-201ENST00000301873 NEUROD6Q96NK8 337 aa25.3■■□□□ 1.64
LTBP3-201ENST00000301873 RNF20Q5VTR2 975 aa25.29■■□□□ 1.64
LTBP3-201ENST00000301873 HSP90AB4PQ58FF6 505 aa25.29■■□□□ 1.64
LTBP3-201ENST00000301873 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
LTBP3-201ENST00000301873 AKAP17AQ02040 695 aaKnown RBP25.28■■□□□ 1.64
LTBP3-201ENST00000301873 BICD2Q8TD16 824 aa25.28■■□□□ 1.64
LTBP3-201ENST00000301873 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
LTBP3-201ENST00000301873 LRRFIP1Q32MZ4 808 aaKnown RBP25.28■■□□□ 1.64
LTBP3-201ENST00000301873 CDK19Q9BWU1 502 aa25.28■■□□□ 1.64
LTBP3-201ENST00000301873 NCBP3Q53F19 620 aaKnown RBP25.27■■□□□ 1.64
LTBP3-201ENST00000301873 SYNE3Q6ZMZ3 975 aa25.26■■□□□ 1.63
LTBP3-201ENST00000301873 ERC2O15083 957 aa25.26■■□□□ 1.63
LTBP3-201ENST00000301873 MARCH6O60337 910 aa25.26■■□□□ 1.63
LTBP3-201ENST00000301873 DAPK1P53355 1430 aa25.26■■□□□ 1.63
LTBP3-201ENST00000301873 CLASRPQ8N2M8 674 aaKnown RBP25.25■■□□□ 1.63
LTBP3-201ENST00000301873 GNAI3P08754 354 aa25.25■■□□□ 1.63
LTBP3-201ENST00000301873 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
LTBP3-201ENST00000301873 SLC4A2P04920 1241 aa25.24■■□□□ 1.63
LTBP3-201ENST00000301873 NEK4P51957 841 aa25.24■■□□□ 1.63
LTBP3-201ENST00000301873 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
LTBP3-201ENST00000301873 FOSBP53539 338 aa25.24■■□□□ 1.63
LTBP3-201ENST00000301873 CHMP4CQ96CF2 233 aa25.24■■□□□ 1.63
LTBP3-201ENST00000301873 HSP90AA2PQ14568 343 aaPredicted RBP25.23■■□□□ 1.63
LTBP3-201ENST00000301873 TRDNQ13061 729 aa25.22■■□□□ 1.63
LTBP3-201ENST00000301873 ATF7IPQ6VMQ6 1270 aa25.22■■□□□ 1.63
LTBP3-201ENST00000301873 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
LTBP3-201ENST00000301873 SLC26A8Q96RN1 970 aa25.22■■□□□ 1.63
LTBP3-201ENST00000301873 EHBP1L1Q8N3D4 1523 aa25.22■■□□□ 1.63
LTBP3-201ENST00000301873 SLC52A1Q9NWF4 448 aa25.22■■□□□ 1.63
LTBP3-201ENST00000301873 GAS2L2Q8NHY3 880 aa25.21■■□□□ 1.63
LTBP3-201ENST00000301873 CCDC30Q5VVM6 783 aa25.21■■□□□ 1.63
LTBP3-201ENST00000301873 RNF214Q8ND24 703 aa25.21■■□□□ 1.63
LTBP3-201ENST00000301873 ATF3P18847 181 aa25.2■■□□□ 1.63
LTBP3-201ENST00000301873 ERBINQ96RT1 1412 aa25.2■■□□□ 1.63
LTBP3-201ENST00000301873 TPD52L1Q16890 204 aaPredicted RBP25.2■■□□□ 1.62
LTBP3-201ENST00000301873 TRAK2O60296 914 aa25.19■■□□□ 1.62
LTBP3-201ENST00000301873 ESCO1Q5FWF5 840 aa25.19■■□□□ 1.62
LTBP3-201ENST00000301873 SKAP1Q86WV1 359 aa25.19■■□□□ 1.62
LTBP3-201ENST00000301873 WDR63Q8IWG1 891 aa25.19■■□□□ 1.62
LTBP3-201ENST00000301873 CDK13Q14004 1512 aaKnown RBP25.18■■□□□ 1.62
LTBP3-201ENST00000301873 VPS53Q5VIR6 699 aa25.18■■□□□ 1.62
LTBP3-201ENST00000301873 RSPH6AQ9H0K4 717 aa25.18■■□□□ 1.62
LTBP3-201ENST00000301873 TPM3P06753 285 aa25.18■■□□□ 1.62
LTBP3-201ENST00000301873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.62
LTBP3-201ENST00000301873 RRS1Q15050 365 aaKnown RBP25.17■■□□□ 1.62
LTBP3-201ENST00000301873 HDGFL1Q5TGJ6 251 aa25.17■■□□□ 1.62
LTBP3-201ENST00000301873 SMG6Q86US8 1419 aaKnown RBP25.17■■□□□ 1.62
LTBP3-201ENST00000301873 ZNF592Q92610 1267 aa25.17■■□□□ 1.62
LTBP3-201ENST00000301873 FBXW7Q969H0 707 aa25.17■■□□□ 1.62
LTBP3-201ENST00000301873 PDE4CQ08493 712 aa25.17■■□□□ 1.62
LTBP3-201ENST00000301873 TRIM29Q14134 588 aa25.17■■□□□ 1.62
LTBP3-201ENST00000301873 WWC1Q8IX03 1113 aa25.17■■□□□ 1.62
LTBP3-201ENST00000301873 CCAR2Q8N163 923 aaKnown RBP25.17■■□□□ 1.62
LTBP3-201ENST00000301873 WASHC4Q2M389 1173 aa25.16■■□□□ 1.62
LTBP3-201ENST00000301873 NOC3LQ8WTT2 800 aaKnown RBP25.15■■□□□ 1.62
LTBP3-201ENST00000301873 MVPQ14764 893 aaKnown RBP25.15■■□□□ 1.62
LTBP3-201ENST00000301873 VPS37DQ86XT2 251 aa25.15■■□□□ 1.62
LTBP3-201ENST00000301873 GCC1Q96CN9 775 aa25.15■■□□□ 1.62
LTBP3-201ENST00000301873 ANKRD30BQ9BXX2 1392 aa25.15■■□□□ 1.62
LTBP3-201ENST00000301873 FSD1Q9BTV5 496 aa25.15■■□□□ 1.62
LTBP3-201ENST00000301873 THUMPD2Q9BTF0 503 aaKnown RBP25.14■■□□□ 1.61
LTBP3-201ENST00000301873 EPRSP07814 1512 aaKnown RBP25.14■■□□□ 1.61
LTBP3-201ENST00000301873 SLFN5Q08AF3 891 aa25.13■■□□□ 1.61
LTBP3-201ENST00000301873 SNAPC4Q5SXM2 1469 aa25.13■■□□□ 1.61
LTBP3-201ENST00000301873 GNAI2P04899 355 aa25.13■■□□□ 1.61
LTBP3-201ENST00000301873 C20orf194Q5TEA3 1177 aa25.13■■□□□ 1.61
LTBP3-201ENST00000301873 NFXL1Q6ZNB6 911 aa25.13■■□□□ 1.61
LTBP3-201ENST00000301873 CAVIN1Q6NZI2 390 aaKnown RBP25.12■■□□□ 1.61
LTBP3-201ENST00000301873 MSH5O43196 834 aa25.12■■□□□ 1.61
LTBP3-201ENST00000301873 RAD21O60216 631 aa25.12■■□□□ 1.61
LTBP3-201ENST00000301873 RALYLQ86SE5 291 aaKnown RBP25.12■■□□□ 1.61
LTBP3-201ENST00000301873 CNTROBQ8N137 903 aa25.11■■□□□ 1.61
LTBP3-201ENST00000301873 ZNF692Q9BU19 519 aaPredicted RBP25.11■■□□□ 1.61
LTBP3-201ENST00000301873 CCDC27Q2M243 656 aa25.11■■□□□ 1.61
LTBP3-201ENST00000301873 FAM43AQ8N2R8 423 aa25.1■■□□□ 1.61
LTBP3-201ENST00000301873 BRPF3Q9ULD4 1205 aa25.1■■□□□ 1.61
LTBP3-201ENST00000301873 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
LTBP3-201ENST00000301873 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
LTBP3-201ENST00000301873 TMPOP42166 694 aaKnown RBP25.1■■□□□ 1.61
LTBP3-201ENST00000301873 MRE11P49959 708 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms