RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ARGLU1Q9NWB6 273 aaPredicted RBP14.92□□□□□ -0.02
ABCA3-201ENST00000301732 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
ABCA3-201ENST00000301732 PDE3BQ13370 1112 aa14.92□□□□□ -0.02
ABCA3-201ENST00000301732 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
ABCA3-201ENST00000301732 TMX1Q9H3N1 280 aa14.92□□□□□ -0.02
ABCA3-201ENST00000301732 EVA1CP58658 441 aa14.91□□□□□ -0.02
ABCA3-201ENST00000301732 NOM1Q5C9Z4 860 aaKnown RBP14.91□□□□□ -0.02
ABCA3-201ENST00000301732 EPS15P42566 896 aa14.91□□□□□ -0.02
ABCA3-201ENST00000301732 ANKRD62A6NC57 917 aa14.91□□□□□ -0.02
ABCA3-201ENST00000301732 TRDNQ13061 729 aa14.91□□□□□ -0.02
ABCA3-201ENST00000301732 OFD1O75665 1012 aa14.9□□□□□ -0.02
ABCA3-201ENST00000301732 CCDC39Q9UFE4 941 aa14.9□□□□□ -0.02
ABCA3-201ENST00000301732 UQCRHLA0A096LP55 91 aa14.9□□□□□ -0.02
ABCA3-201ENST00000301732 UQCRHP07919 91 aa14.9□□□□□ -0.02
ABCA3-201ENST00000301732 CCDC43Q96MW1 224 aaKnown RBP14.9□□□□□ -0.02
ABCA3-201ENST00000301732 RDXP35241 583 aaKnown RBP14.9□□□□□ -0.02
ABCA3-201ENST00000301732 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
ABCA3-201ENST00000301732 LMOD3Q0VAK6 560 aa14.89□□□□□ -0.03
ABCA3-201ENST00000301732 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.03
ABCA3-201ENST00000301732 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
ABCA3-201ENST00000301732 NEK4P51957 841 aa14.89□□□□□ -0.03
ABCA3-201ENST00000301732 CPLX2Q6PUV4 134 aaKnown RBP14.89□□□□□ -0.03
ABCA3-201ENST00000301732 CUX2O14529 1486 aa14.89□□□□□ -0.03
ABCA3-201ENST00000301732 INTS3Q68E01 1043 aaKnown RBP14.89□□□□□ -0.03
ABCA3-201ENST00000301732 RUFY2Q8WXA3 655 aa14.89□□□□□ -0.03
ABCA3-201ENST00000301732 COG3Q96JB2 828 aa14.89□□□□□ -0.03
ABCA3-201ENST00000301732 WASHC2CQ9Y4E1 1318 aa14.88□□□□□ -0.03
ABCA3-201ENST00000301732 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
ABCA3-201ENST00000301732 DDX19BQ9UMR2 479 aa14.88□□□□□ -0.03
ABCA3-201ENST00000301732 TTC5Q8N0Z6 440 aa14.88□□□□□ -0.03
ABCA3-201ENST00000301732 MRE11P49959 708 aa14.88□□□□□ -0.03
ABCA3-201ENST00000301732 KRI1Q8N9T8 703 aaKnown RBP14.88□□□□□ -0.03
ABCA3-201ENST00000301732 OLFM4Q6UX06 510 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 NACADO15069 1562 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 ERICH2A1L162 156 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 CBX1P83916 185 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 NEXNQ0ZGT2 675 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 TAX1BP1Q86VP1 789 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 TSPY26PQ9H489 355 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 TSPYL4Q9UJ04 414 aa14.87□□□□□ -0.03
ABCA3-201ENST00000301732 NEFHP12036 1026 aa14.86□□□□□ -0.03
ABCA3-201ENST00000301732 IKQ13123 557 aaPredicted RBP14.86□□□□□ -0.03
ABCA3-201ENST00000301732 GGNBP2Q9H3C7 697 aa14.86□□□□□ -0.03
ABCA3-201ENST00000301732 CCDC47Q96A33 483 aaKnown RBP14.86□□□□□ -0.03
ABCA3-201ENST00000301732 TAF3Q5VWG9 929 aa14.85□□□□□ -0.03
ABCA3-201ENST00000301732 NOL10Q9BSC4 688 aaKnown RBP14.85□□□□□ -0.03
ABCA3-201ENST00000301732 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
ABCA3-201ENST00000301732 CCDC191Q8NCU4 936 aa14.85□□□□□ -0.03
ABCA3-201ENST00000301732 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
ABCA3-201ENST00000301732 NUCB2P80303 420 aa14.85□□□□□ -0.03
ABCA3-201ENST00000301732 SRRTQ9BXP5 876 aaKnown RBP14.85□□□□□ -0.03
ABCA3-201ENST00000301732 CT47B1P0C2W7 299 aaPredicted RBP14.84□□□□□ -0.03
ABCA3-201ENST00000301732 BCAR3O75815 825 aa14.84□□□□□ -0.03
ABCA3-201ENST00000301732 ZHX3Q9H4I2 956 aa14.84□□□□□ -0.03
ABCA3-201ENST00000301732 SIL1Q9H173 461 aa14.84□□□□□ -0.03
ABCA3-201ENST00000301732 FSD1Q9BTV5 496 aa14.83□□□□□ -0.03
ABCA3-201ENST00000301732 HOOK1Q9UJC3 728 aaKnown RBP14.83□□□□□ -0.03
ABCA3-201ENST00000301732 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
ABCA3-201ENST00000301732 RIC3Q7Z5B4 369 aa14.83□□□□□ -0.04
ABCA3-201ENST00000301732 RNF20Q5VTR2 975 aa14.83□□□□□ -0.04
ABCA3-201ENST00000301732 LEKR1Q6ZMV7 388 aa14.83□□□□□ -0.04
ABCA3-201ENST00000301732 PDZRN3Q9UPQ7 1066 aa14.83□□□□□ -0.04
ABCA3-201ENST00000301732 TSR2Q969E8 191 aaKnown RBP14.83□□□□□ -0.04
ABCA3-201ENST00000301732 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
ABCA3-201ENST00000301732 DIAPH1O60610 1272 aaKnown RBP14.82□□□□□ -0.04
ABCA3-201ENST00000301732 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
ABCA3-201ENST00000301732 DDX54Q8TDD1 881 aaKnown RBP14.82□□□□□ -0.04
ABCA3-201ENST00000301732 CAMK4Q16566 473 aa14.82□□□□□ -0.04
ABCA3-201ENST00000301732 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
ABCA3-201ENST00000301732 USP47Q96K76 1375 aa14.82□□□□□ -0.04
ABCA3-201ENST00000301732 SERPINC1P01008 464 aa14.82□□□□□ -0.04
ABCA3-201ENST00000301732 SAFBQ15424 915 aaKnown RBP eCLIP14.82□□□□□ -0.04
ABCA3-201ENST00000301732 ADAMTS8Q9UP79 889 aa14.82□□□□□ -0.04
ABCA3-201ENST00000301732 ENOX2Q16206 610 aaKnown RBP14.81□□□□□ -0.04
ABCA3-201ENST00000301732 ATP2B2Q01814 1243 aa14.81□□□□□ -0.04
ABCA3-201ENST00000301732 AKNAQ7Z591 1439 aa14.81□□□□□ -0.04
ABCA3-201ENST00000301732 ZHX1Q9UKY1 873 aaPredicted RBP14.81□□□□□ -0.04
ABCA3-201ENST00000301732 ACBD3Q9H3P7 528 aa14.81□□□□□ -0.04
ABCA3-201ENST00000301732 TMEM132AQ24JP5 1023 aa14.8□□□□□ -0.04
ABCA3-201ENST00000301732 PAF1Q8N7H5 531 aa14.8□□□□□ -0.04
ABCA3-201ENST00000301732 FILIP1Q7Z7B0 1213 aa14.8□□□□□ -0.04
ABCA3-201ENST00000301732 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
ABCA3-201ENST00000301732 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
ABCA3-201ENST00000301732 SURF6O75683 361 aaKnown RBP14.79□□□□□ -0.04
ABCA3-201ENST00000301732 LARP6Q9BRS8 491 aaKnown RBP14.79□□□□□ -0.04
ABCA3-201ENST00000301732 CWC22Q9HCG8 908 aaKnown RBP14.79□□□□□ -0.04
ABCA3-201ENST00000301732 CWC15Q9P013 229 aaKnown RBP14.79□□□□□ -0.04
ABCA3-201ENST00000301732 DNA2P51530 1060 aa14.79□□□□□ -0.04
ABCA3-201ENST00000301732 CDC45O75419 566 aa14.79□□□□□ -0.04
ABCA3-201ENST00000301732 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
ABCA3-201ENST00000301732 KINO60870 393 aaKnown RBP14.78□□□□□ -0.04
ABCA3-201ENST00000301732 GRPEL1Q9HAV7 217 aa14.78□□□□□ -0.04
ABCA3-201ENST00000301732 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
ABCA3-201ENST00000301732 SEPT11Q9NVA2 429 aaKnown RBP14.78□□□□□ -0.04
ABCA3-201ENST00000301732 ANKRD30AQ9BXX3 1397 aa14.78□□□□□ -0.04
ABCA3-201ENST00000301732 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
ABCA3-201ENST00000301732 TMEM132EQ6IEE7 984 aa14.78□□□□□ -0.04
ABCA3-201ENST00000301732 LRRFIP2Q9Y608 721 aaKnown RBP14.78□□□□□ -0.04
ABCA3-201ENST00000301732 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
ABCA3-201ENST00000301732 CDR1P51861 262 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms