RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 PODXL2Q9NZ53 605 aa12.04□□□□□ -0.48
TUBA1A-202ENST00000301071 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
TUBA1A-202ENST00000301071 LAMC1P11047 1609 aa12.04□□□□□ -0.48
TUBA1A-202ENST00000301071 HDGFP51858 240 aaKnown RBP12.03□□□□□ -0.48
TUBA1A-202ENST00000301071 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
TUBA1A-202ENST00000301071 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
TUBA1A-202ENST00000301071 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
TUBA1A-202ENST00000301071 LMTK3Q96Q04 1460 aa12.03□□□□□ -0.48
TUBA1A-202ENST00000301071 SCAF11Q99590 1463 aaKnown RBP12.03□□□□□ -0.48
TUBA1A-202ENST00000301071 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
TUBA1A-202ENST00000301071 GLIPR1L2Q4G1C9 344 aa12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 FAM43AQ8N2R8 423 aa12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 C14orf93Q9H972 538 aaKnown RBP12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 LAS1LQ9Y4W2 734 aaKnown RBP12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 EID1Q9Y6B2 187 aa12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 ALKQ9UM73 1620 aa12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
TUBA1A-202ENST00000301071 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
TUBA1A-202ENST00000301071 ROCK2O75116 1388 aaKnown RBP12.01□□□□□ -0.49
TUBA1A-202ENST00000301071 GPRASP1Q5JY77 1395 aa12.01□□□□□ -0.49
TUBA1A-202ENST00000301071 PLEKHG1Q9ULL1 1385 aa12.01□□□□□ -0.49
TUBA1A-202ENST00000301071 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
TUBA1A-202ENST00000301071 ASXL1Q8IXJ9 1541 aa12□□□□□ -0.49
TUBA1A-202ENST00000301071 ADGRB1O14514 1584 aa12□□□□□ -0.49
TUBA1A-202ENST00000301071 HSPA2P54652 639 aa11.99□□□□□ -0.49
TUBA1A-202ENST00000301071 RRP1P56182 461 aaKnown RBP11.99□□□□□ -0.49
TUBA1A-202ENST00000301071 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
TUBA1A-202ENST00000301071 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
TUBA1A-202ENST00000301071 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
TUBA1A-202ENST00000301071 CARD11Q9BXL7 1154 aa11.99□□□□□ -0.49
TUBA1A-202ENST00000301071 STRCQ7RTU9 1775 aa11.98□□□□□ -0.49
TUBA1A-202ENST00000301071 NCKAP5LQ9HCH0 1330 aa11.98□□□□□ -0.49
TUBA1A-202ENST00000301071 TMEM132EQ6IEE7 984 aa11.98□□□□□ -0.49
TUBA1A-202ENST00000301071 MED14O60244 1454 aa11.97□□□□□ -0.49
TUBA1A-202ENST00000301071 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
TUBA1A-202ENST00000301071 USP47Q96K76 1375 aa11.96□□□□□ -0.5
TUBA1A-202ENST00000301071 DIP2AQ14689 1571 aa11.96□□□□□ -0.5
TUBA1A-202ENST00000301071 NFKBIBQ15653 356 aa11.96□□□□□ -0.5
TUBA1A-202ENST00000301071 SLC26A8Q96RN1 970 aa11.96□□□□□ -0.5
TUBA1A-202ENST00000301071 NPHP4O75161 1426 aaPredicted RBP11.95□□□□□ -0.5
TUBA1A-202ENST00000301071 METP08581 1390 aa11.95□□□□□ -0.5
TUBA1A-202ENST00000301071 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
TUBA1A-202ENST00000301071 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
TUBA1A-202ENST00000301071 PNISRQ8TF01 805 aaKnown RBP11.94□□□□□ -0.5
TUBA1A-202ENST00000301071 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
TUBA1A-202ENST00000301071 KNDC1Q76NI1 1749 aa11.94□□□□□ -0.5
TUBA1A-202ENST00000301071 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
TUBA1A-202ENST00000301071 CHD2O14647 1828 aaKnown RBP11.93□□□□□ -0.5
TUBA1A-202ENST00000301071 YTHDC2Q9H6S0 1430 aaKnown RBP11.93□□□□□ -0.5
TUBA1A-202ENST00000301071 TMC1Q8TDI8 760 aa11.93□□□□□ -0.5
TUBA1A-202ENST00000301071 RCAN3Q9UKA8 241 aa11.93□□□□□ -0.5
TUBA1A-202ENST00000301071 FRAT1Q92837 279 aaPredicted RBP11.92□□□□□ -0.5
TUBA1A-202ENST00000301071 INSRP06213 1382 aa11.92□□□□□ -0.5
TUBA1A-202ENST00000301071 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
TUBA1A-202ENST00000301071 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
TUBA1A-202ENST00000301071 PTPRUQ92729 1446 aa11.91□□□□□ -0.5
TUBA1A-202ENST00000301071 ST20-MTHFSA0A0A6YYL1 179 aa11.91□□□□□ -0.5
TUBA1A-202ENST00000301071 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
TUBA1A-202ENST00000301071 STK26Q9P289 416 aa11.91□□□□□ -0.5
TUBA1A-202ENST00000301071 RALBP1Q15311 655 aa11.9□□□□□ -0.5
TUBA1A-202ENST00000301071 QRICH2Q9H0J4 1663 aa11.9□□□□□ -0.5
TUBA1A-202ENST00000301071 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.51
TUBA1A-202ENST00000301071 EIF3AQ14152 1382 aaKnown RBP11.89□□□□□ -0.51
TUBA1A-202ENST00000301071 ABCC11Q96J66 1382 aa11.89□□□□□ -0.51
TUBA1A-202ENST00000301071 DLC1Q96QB1 1528 aa11.89□□□□□ -0.51
TUBA1A-202ENST00000301071 PIK3R4Q99570 1358 aa11.88□□□□□ -0.51
TUBA1A-202ENST00000301071 CPS1P31327 1500 aa11.88□□□□□ -0.51
TUBA1A-202ENST00000301071 L1TD1Q5T7N2 865 aaKnown RBP11.88□□□□□ -0.51
TUBA1A-202ENST00000301071 HOMEZQ8IX15 550 aa11.88□□□□□ -0.51
TUBA1A-202ENST00000301071 PKNOX2Q96KN3 472 aa11.88□□□□□ -0.51
TUBA1A-202ENST00000301071 TECPR2O15040 1411 aa11.88□□□□□ -0.51
TUBA1A-202ENST00000301071 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
TUBA1A-202ENST00000301071 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
TUBA1A-202ENST00000301071 AMOTL2Q9Y2J4 779 aa11.87□□□□□ -0.51
TUBA1A-202ENST00000301071 TESK2Q96S53 571 aa11.86□□□□□ -0.51
TUBA1A-202ENST00000301071 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
TUBA1A-202ENST00000301071 NWD1Q149M9 1564 aa11.86□□□□□ -0.51
TUBA1A-202ENST00000301071 PRAM1Q96QH2 718 aa11.86□□□□□ -0.51
TUBA1A-202ENST00000301071 ROBO2Q9HCK4 1378 aa11.85□□□□□ -0.51
TUBA1A-202ENST00000301071 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
TUBA1A-202ENST00000301071 WAPLQ7Z5K2 1190 aa11.85□□□□□ -0.51
TUBA1A-202ENST00000301071 KCNA6P17658 529 aa11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 PTCH1Q13635 1447 aa11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 SAFB2Q14151 953 aaKnown RBP eCLIP11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 CENPQQ7L2Z9 268 aaPredicted RBP11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 POGKQ9P215 609 aa11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 SBNO2Q9Y2G9 1366 aa11.84□□□□□ -0.51
TUBA1A-202ENST00000301071 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
TUBA1A-202ENST00000301071 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
TUBA1A-202ENST00000301071 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
TUBA1A-202ENST00000301071 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
TUBA1A-202ENST00000301071 TMF1P82094 1093 aa11.8□□□□□ -0.52
TUBA1A-202ENST00000301071 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
TUBA1A-202ENST00000301071 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms