RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 MYO5BQ9ULV0 1848 aa8.03□□□□□ -1.12
PATL1-201ENST00000300146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.03□□□□□ -1.12
PATL1-201ENST00000300146 CDK19Q9BWU1 502 aa8.03□□□□□ -1.12
PATL1-201ENST00000300146 CARD11Q9BXL7 1154 aa8.03□□□□□ -1.12
PATL1-201ENST00000300146 ANKRD30BQ9BXX2 1392 aa8.02□□□□□ -1.12
PATL1-201ENST00000300146 ZC3H13Q5T200 1668 aaKnown RBP8.02□□□□□ -1.13
PATL1-201ENST00000300146 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
PATL1-201ENST00000300146 GCC2Q8IWJ2 1684 aa8.02□□□□□ -1.13
PATL1-201ENST00000300146 TONSLQ96HA7 1378 aa8.01□□□□□ -1.13
PATL1-201ENST00000300146 ZNF142P52746 1687 aaPredicted RBP8.01□□□□□ -1.13
PATL1-201ENST00000300146 ABTB2Q8N961 1025 aa8.01□□□□□ -1.13
PATL1-201ENST00000300146 NUDT16Q96DE0 195 aaKnown RBP8.01□□□□□ -1.13
PATL1-201ENST00000300146 FAM135BQ49AJ0 1406 aa8.01□□□□□ -1.13
PATL1-201ENST00000300146 CLTCL1P53675 1640 aa8.01□□□□□ -1.13
PATL1-201ENST00000300146 EVA1CP58658 441 aa8.01□□□□□ -1.13
PATL1-201ENST00000300146 PRDM11Q9NQV5 511 aa8.01□□□□□ -1.13
PATL1-201ENST00000300146 POLR1AO95602 1720 aaPredicted RBP8□□□□□ -1.13
PATL1-201ENST00000300146 TMEM131LA2VDJ0 1609 aa8□□□□□ -1.13
PATL1-201ENST00000300146 CABP1Q9NZU7 370 aa8□□□□□ -1.13
PATL1-201ENST00000300146 STRCP1A6NGW2 1772 aa8□□□□□ -1.13
PATL1-201ENST00000300146 DEPDC5O75140 1603 aa8□□□□□ -1.13
PATL1-201ENST00000300146 ADGRL3Q9HAR2 1447 aa8□□□□□ -1.13
PATL1-201ENST00000300146 ZNF772Q68DY9 489 aaPredicted RBP7.99□□□□□ -1.13
PATL1-201ENST00000300146 WASLO00401 505 aaPredicted RBP7.99□□□□□ -1.13
PATL1-201ENST00000300146 IQGAP3Q86VI3 1631 aa7.99□□□□□ -1.13
PATL1-201ENST00000300146 YTHDC2Q9H6S0 1430 aaKnown RBP7.99□□□□□ -1.13
PATL1-201ENST00000300146 UNC13BO14795 1591 aa7.99□□□□□ -1.13
PATL1-201ENST00000300146 NBPF8Q3BBV2 869 aa7.99□□□□□ -1.13
PATL1-201ENST00000300146 LTV1Q96GA3 475 aaPredicted RBP7.99□□□□□ -1.13
PATL1-201ENST00000300146 NLRP6P59044 892 aa7.98□□□□□ -1.13
PATL1-201ENST00000300146 CSB-PGBD3P0DP91 1061 aa7.98□□□□□ -1.13
PATL1-201ENST00000300146 FAM98CQ17RN3 349 aaKnown RBP7.98□□□□□ -1.13
PATL1-201ENST00000300146 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
PATL1-201ENST00000300146 C1orf167Q5SNV9 1468 aa7.98□□□□□ -1.13
PATL1-201ENST00000300146 ROCK2O75116 1388 aaKnown RBP7.98□□□□□ -1.13
PATL1-201ENST00000300146 GPRASP1Q5JY77 1395 aa7.98□□□□□ -1.13
PATL1-201ENST00000300146 PIK3R4Q99570 1358 aa7.97□□□□□ -1.13
PATL1-201ENST00000300146 LRPPRCP42704 1394 aaKnown RBP7.97□□□□□ -1.13
PATL1-201ENST00000300146 PPM1GO15355 546 aaPredicted RBP7.97□□□□□ -1.13
PATL1-201ENST00000300146 CENPJQ9HC77 1338 aaPredicted RBP7.97□□□□□ -1.13
PATL1-201ENST00000300146 FBLN1P23142 703 aa7.97□□□□□ -1.13
PATL1-201ENST00000300146 PRR36Q9H6K5 1346 aa7.96□□□□□ -1.13
PATL1-201ENST00000300146 TNNT2P45379 298 aaPredicted RBP7.96□□□□□ -1.13
PATL1-201ENST00000300146 TRPM2O94759 1503 aa7.96□□□□□ -1.13
PATL1-201ENST00000300146 MST1RQ04912 1400 aa7.96□□□□□ -1.13
PATL1-201ENST00000300146 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.14
PATL1-201ENST00000300146 ACEP12821 1306 aa7.96□□□□□ -1.14
PATL1-201ENST00000300146 CCDC61Q9Y6R9 512 aa7.95□□□□□ -1.14
PATL1-201ENST00000300146 ALKQ9UM73 1620 aa7.95□□□□□ -1.14
PATL1-201ENST00000300146 NKTRP30414 1462 aaKnown RBP7.95□□□□□ -1.14
PATL1-201ENST00000300146 SPATA31A6Q5VVP1 1343 aa7.95□□□□□ -1.14
PATL1-201ENST00000300146 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
PATL1-201ENST00000300146 ROBO1Q9Y6N7 1651 aa7.95□□□□□ -1.14
PATL1-201ENST00000300146 TRPC5Q9UL62 973 aaPredicted RBP7.95□□□□□ -1.14
PATL1-201ENST00000300146 ABCC11Q96J66 1382 aa7.95□□□□□ -1.14
PATL1-201ENST00000300146 NEXMIFQ5QGS0 1516 aa7.94□□□□□ -1.14
PATL1-201ENST00000300146 ST20-MTHFSA0A0A6YYL1 179 aa7.94□□□□□ -1.14
PATL1-201ENST00000300146 FAM83GA6ND36 823 aa7.94□□□□□ -1.14
PATL1-201ENST00000300146 RBM6P78332 1123 aaKnown RBP7.94□□□□□ -1.14
PATL1-201ENST00000300146 SLC12A5Q9H2X9 1139 aa7.94□□□□□ -1.14
PATL1-201ENST00000300146 SPHKAPQ2M3C7 1700 aa7.94□□□□□ -1.14
PATL1-201ENST00000300146 DEFB132Q7Z7B7 95 aa7.94□□□□□ -1.14
PATL1-201ENST00000300146 MED1Q15648 1581 aaPredicted RBP7.94□□□□□ -1.14
PATL1-201ENST00000300146 SF3B2Q13435 895 aaKnown RBP7.93□□□□□ -1.14
PATL1-201ENST00000300146 PNPLA6Q8IY17 1366 aa7.93□□□□□ -1.14
PATL1-201ENST00000300146 IQSEC2Q5JU85 1478 aa7.93□□□□□ -1.14
PATL1-201ENST00000300146 SOS2Q07890 1332 aaPredicted RBP7.92□□□□□ -1.14
PATL1-201ENST00000300146 ACIN1Q9UKV3 1341 aaKnown RBP7.92□□□□□ -1.14
PATL1-201ENST00000300146 SEPT12Q8IYM1 358 aa7.92□□□□□ -1.14
PATL1-201ENST00000300146 SPATA31A3Q5VYP0 1347 aa7.92□□□□□ -1.14
PATL1-201ENST00000300146 KIF1BO60333 1816 aa7.92□□□□□ -1.14
PATL1-201ENST00000300146 TOM1L2Q6ZVM7 507 aa7.91□□□□□ -1.14
PATL1-201ENST00000300146 GJD4Q96KN9 370 aaPredicted RBP7.91□□□□□ -1.14
PATL1-201ENST00000300146 HRCP23327 699 aa7.91□□□□□ -1.14
PATL1-201ENST00000300146 PIK3C2GO75747 1445 aa7.91□□□□□ -1.14
PATL1-201ENST00000300146 LRP6O75581 1613 aa7.91□□□□□ -1.14
PATL1-201ENST00000300146 EP400Q96L91 3159 aa7.91□□□□□ -1.14
PATL1-201ENST00000300146 PSDA5PKW4 1024 aaPredicted RBP7.91□□□□□ -1.14
PATL1-201ENST00000300146 UNC5CLQ8IV45 518 aa7.91□□□□□ -1.14
PATL1-201ENST00000300146 EVC2Q86UK5 1308 aa7.91□□□□□ -1.14
PATL1-201ENST00000300146 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.9□□□□□ -1.14
PATL1-201ENST00000300146 KAT6BQ8WYB5 2073 aa7.9□□□□□ -1.14
PATL1-201ENST00000300146 PDE3BQ13370 1112 aa7.9□□□□□ -1.14
PATL1-201ENST00000300146 UPF1Q92900 1129 aaKnown RBP eCLIP7.9□□□□□ -1.14
PATL1-201ENST00000300146 NLRP2Q9NX02 1062 aa7.9□□□□□ -1.14
PATL1-201ENST00000300146 NLRP13Q86W25 1043 aa7.9□□□□□ -1.15
PATL1-201ENST00000300146 NME9Q86XW9 330 aa7.9□□□□□ -1.15
PATL1-201ENST00000300146 ASXL1Q8IXJ9 1541 aa7.89□□□□□ -1.15
PATL1-201ENST00000300146 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
PATL1-201ENST00000300146 LARP1Q6PKG0 1096 aaKnown RBP7.89□□□□□ -1.15
PATL1-201ENST00000300146 GCP02774 474 aa7.88□□□□□ -1.15
PATL1-201ENST00000300146 SYTL4Q96C24 671 aaPredicted RBP7.88□□□□□ -1.15
PATL1-201ENST00000300146 KIAA0232Q92628 1395 aa7.88□□□□□ -1.15
PATL1-201ENST00000300146 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
PATL1-201ENST00000300146 TRIM37O94972 964 aa7.88□□□□□ -1.15
PATL1-201ENST00000300146 CHD2O14647 1828 aaKnown RBP7.88□□□□□ -1.15
PATL1-201ENST00000300146 HDGFL2Q7Z4V5 671 aaPredicted RBP7.88□□□□□ -1.15
PATL1-201ENST00000300146 KRT27Q7Z3Y8 459 aa7.87□□□□□ -1.15
PATL1-201ENST00000300146 EN1Q05925 392 aaPredicted RBP7.87□□□□□ -1.15
PATL1-201ENST00000300146 PTCH1Q13635 1447 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms