RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 CHAF1AQ13111 956 aaPredicted RBP18.2■□□□□ 0.5
CDH23-202ENST00000299366 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
CDH23-202ENST00000299366 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
CDH23-202ENST00000299366 ADGRF5Q8IZF2 1346 aa18.2■□□□□ 0.5
CDH23-202ENST00000299366 FBXW7Q969H0 707 aa18.2■□□□□ 0.5
CDH23-202ENST00000299366 RNF123Q5XPI4 1314 aa18.2■□□□□ 0.5
CDH23-202ENST00000299366 GNL2Q13823 731 aaKnown RBP18.19■□□□□ 0.5
CDH23-202ENST00000299366 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
CDH23-202ENST00000299366 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
CDH23-202ENST00000299366 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
CDH23-202ENST00000299366 IGHDP01880 384 aa18.19■□□□□ 0.5
CDH23-202ENST00000299366 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
CDH23-202ENST00000299366 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
CDH23-202ENST00000299366 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
CDH23-202ENST00000299366 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
CDH23-202ENST00000299366 GNAI1P63096 354 aa18.18■□□□□ 0.5
CDH23-202ENST00000299366 DISP3Q9P2K9 1392 aa18.18■□□□□ 0.5
CDH23-202ENST00000299366 CAVIN1Q6NZI2 390 aaKnown RBP18.17■□□□□ 0.5
CDH23-202ENST00000299366 FAM13BQ9NYF5 915 aa18.17■□□□□ 0.5
CDH23-202ENST00000299366 VPS37CA5D8V6 355 aaPredicted RBP18.17■□□□□ 0.5
CDH23-202ENST00000299366 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
CDH23-202ENST00000299366 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
CDH23-202ENST00000299366 NLRP6P59044 892 aa18.17■□□□□ 0.5
CDH23-202ENST00000299366 ATF7IPQ6VMQ6 1270 aa18.17■□□□□ 0.5
CDH23-202ENST00000299366 SSH1Q8WYL5 1049 aa18.16■□□□□ 0.5
CDH23-202ENST00000299366 NEK4P51957 841 aa18.16■□□□□ 0.5
CDH23-202ENST00000299366 SLC26A8Q96RN1 970 aa18.16■□□□□ 0.5
CDH23-202ENST00000299366 MAP4K4O95819 1239 aaPredicted RBP18.15■□□□□ 0.5
CDH23-202ENST00000299366 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
CDH23-202ENST00000299366 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
CDH23-202ENST00000299366 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
CDH23-202ENST00000299366 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
CDH23-202ENST00000299366 FAM43AQ8N2R8 423 aa18.15■□□□□ 0.5
CDH23-202ENST00000299366 TOMM22Q9NS69 142 aa18.15■□□□□ 0.5
CDH23-202ENST00000299366 DIAPH3Q9NSV4 1193 aa18.15■□□□□ 0.5
CDH23-202ENST00000299366 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
CDH23-202ENST00000299366 SYAP1Q96A49 352 aaPredicted RBP18.15■□□□□ 0.5
CDH23-202ENST00000299366 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
CDH23-202ENST00000299366 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
CDH23-202ENST00000299366 REC8O95072 547 aa18.14■□□□□ 0.49
CDH23-202ENST00000299366 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
CDH23-202ENST00000299366 CREBRFQ8IUR6 639 aa18.14■□□□□ 0.49
CDH23-202ENST00000299366 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
CDH23-202ENST00000299366 TAF7LQ5H9L4 462 aa18.14■□□□□ 0.49
CDH23-202ENST00000299366 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
CDH23-202ENST00000299366 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
CDH23-202ENST00000299366 PRPF40AO75400 957 aaKnown RBP18.13■□□□□ 0.49
CDH23-202ENST00000299366 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
CDH23-202ENST00000299366 KDM4AO75164 1064 aa18.12■□□□□ 0.49
CDH23-202ENST00000299366 RBM33Q96EV2 1170 aaKnown RBP18.12■□□□□ 0.49
CDH23-202ENST00000299366 SEC24BO95487 1268 aa18.12■□□□□ 0.49
CDH23-202ENST00000299366 TMPOP42166 694 aaKnown RBP18.12■□□□□ 0.49
CDH23-202ENST00000299366 SURF6O75683 361 aaKnown RBP18.11■□□□□ 0.49
CDH23-202ENST00000299366 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
CDH23-202ENST00000299366 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
CDH23-202ENST00000299366 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
CDH23-202ENST00000299366 IL1RAPL2Q9NP60 686 aa18.1■□□□□ 0.49
CDH23-202ENST00000299366 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
CDH23-202ENST00000299366 CDC45O75419 566 aa18.09■□□□□ 0.49
CDH23-202ENST00000299366 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
CDH23-202ENST00000299366 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
CDH23-202ENST00000299366 MCM10Q7L590 875 aa18.08■□□□□ 0.49
CDH23-202ENST00000299366 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.49
CDH23-202ENST00000299366 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.49
CDH23-202ENST00000299366 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.48
CDH23-202ENST00000299366 ROCK1Q13464 1354 aa18.08■□□□□ 0.48
CDH23-202ENST00000299366 NASPP49321 788 aaPredicted RBP18.07■□□□□ 0.48
CDH23-202ENST00000299366 PANK2Q9BZ23 570 aa18.07■□□□□ 0.48
CDH23-202ENST00000299366 EMILIN1Q9Y6C2 1016 aa18.07■□□□□ 0.48
CDH23-202ENST00000299366 IFIT2P09913 472 aaKnown RBP18.07■□□□□ 0.48
CDH23-202ENST00000299366 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
CDH23-202ENST00000299366 PSME1Q06323 249 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 ZNF592Q92610 1267 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 PCDHB15Q9Y5E8 787 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 KDM6BO15054 1643 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 PLEKHH2Q8IVE3 1493 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 CHD1LQ86WJ1 897 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 H3BQV1 296 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 MCM4P33991 863 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 SF3A1Q15459 793 aaKnown RBP18.06■□□□□ 0.48
CDH23-202ENST00000299366 IFFO2Q5TF58 517 aa18.06■□□□□ 0.48
CDH23-202ENST00000299366 FBXO31Q5XUX0 539 aaPredicted RBP18.06■□□□□ 0.48
CDH23-202ENST00000299366 PTMSP20962 102 aa18.05■□□□□ 0.48
CDH23-202ENST00000299366 R3HCC1Q9Y3T6 440 aaKnown RBP18.05■□□□□ 0.48
CDH23-202ENST00000299366 XPCQ01831 940 aaPredicted RBP18.05■□□□□ 0.48
CDH23-202ENST00000299366 TBC1D2Q9BYX2 928 aa18.05■□□□□ 0.48
CDH23-202ENST00000299366 SKOR2Q2VWA4 1001 aaPredicted RBP18.05■□□□□ 0.48
CDH23-202ENST00000299366 LARP6Q9BRS8 491 aaKnown RBP18.05■□□□□ 0.48
CDH23-202ENST00000299366 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 F6X3S4 739 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 NRDCO43847 1150 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
CDH23-202ENST00000299366 SPATA31E1Q6ZUB1 1445 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 GOLGA6L6A8MZA4 724 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 TRIM27P14373 513 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 UBE2Q2Q8WVN8 375 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 UPF3BQ9BZI7 483 aaKnown RBP18.04■□□□□ 0.48
CDH23-202ENST00000299366 FIBPO43427 364 aa18.04■□□□□ 0.48
CDH23-202ENST00000299366 CDK11BP21127 795 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms