RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 POGKQ9P215 609 aa19.28■□□□□ 0.68
C9orf3-202ENST00000297979 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
C9orf3-202ENST00000297979 RIMS1Q86UR5 1692 aaKnown RBP19.26■□□□□ 0.67
C9orf3-202ENST00000297979 CARD14Q9BXL6 1004 aa19.25■□□□□ 0.67
C9orf3-202ENST00000297979 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
C9orf3-202ENST00000297979 SLIT1O75093 1534 aa19.24■□□□□ 0.67
C9orf3-202ENST00000297979 METP08581 1390 aa19.24■□□□□ 0.67
C9orf3-202ENST00000297979 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
C9orf3-202ENST00000297979 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
C9orf3-202ENST00000297979 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-202ENST00000297979 PLEKHG1Q9ULL1 1385 aa19.23■□□□□ 0.67
C9orf3-202ENST00000297979 ARHGAP23Q9P227 1491 aa19.23■□□□□ 0.67
C9orf3-202ENST00000297979 CABP2Q9NPB3 220 aa19.23■□□□□ 0.67
C9orf3-202ENST00000297979 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
C9orf3-202ENST00000297979 USP32Q8NFA0 1604 aa19.22■□□□□ 0.67
C9orf3-202ENST00000297979 NSD3Q9BZ95 1437 aa19.22■□□□□ 0.67
C9orf3-202ENST00000297979 BCANQ96GW7 911 aa19.22■□□□□ 0.67
C9orf3-202ENST00000297979 ADAMTSL3P82987 1691 aa19.21■□□□□ 0.67
C9orf3-202ENST00000297979 ATAD2Q6PL18 1390 aa19.21■□□□□ 0.67
C9orf3-202ENST00000297979 ADAMTS13Q76LX8 1427 aa19.21■□□□□ 0.67
C9orf3-202ENST00000297979 SRPK2P78362 688 aaKnown RBP19.21■□□□□ 0.67
C9orf3-202ENST00000297979 RTN4Q9NQC3 1192 aaKnown RBP19.21■□□□□ 0.67
C9orf3-202ENST00000297979 TECPR2O15040 1411 aa19.21■□□□□ 0.67
C9orf3-202ENST00000297979 LTKP29376 864 aa19.2■□□□□ 0.66
C9orf3-202ENST00000297979 PPP2R1AP30153 589 aa19.2■□□□□ 0.66
C9orf3-202ENST00000297979 ANKRD36BQ8N2N9 1353 aa19.2■□□□□ 0.66
C9orf3-202ENST00000297979 EID1Q9Y6B2 187 aa19.2■□□□□ 0.66
C9orf3-202ENST00000297979 CPS1P31327 1500 aa19.2■□□□□ 0.66
C9orf3-202ENST00000297979 TXNDC2Q86VQ3 553 aa19.2■□□□□ 0.66
C9orf3-202ENST00000297979 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
C9orf3-202ENST00000297979 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-202ENST00000297979 CEP170BQ9Y4F5 1589 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-202ENST00000297979 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
C9orf3-202ENST00000297979 WAPLQ7Z5K2 1190 aa19.18■□□□□ 0.66
C9orf3-202ENST00000297979 SIRT1Q96EB6 747 aa19.16■□□□□ 0.66
C9orf3-202ENST00000297979 MED14O60244 1454 aa19.16■□□□□ 0.66
C9orf3-202ENST00000297979 CDK19Q9BWU1 502 aa19.15■□□□□ 0.66
C9orf3-202ENST00000297979 INSRP06213 1382 aa19.15■□□□□ 0.66
C9orf3-202ENST00000297979 KLHL34Q8N239 644 aa19.14■□□□□ 0.65
C9orf3-202ENST00000297979 CGNL1Q0VF96 1302 aa19.14■□□□□ 0.65
C9orf3-202ENST00000297979 A0A1W2PP64 1363 aa19.13■□□□□ 0.65
C9orf3-202ENST00000297979 ZNF142P52746 1687 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-202ENST00000297979 DIP2AQ14689 1571 aa19.12■□□□□ 0.65
C9orf3-202ENST00000297979 NSD2O96028 1365 aa19.11■□□□□ 0.65
C9orf3-202ENST00000297979 CD163L1Q9NR16 1453 aa19.1■□□□□ 0.65
C9orf3-202ENST00000297979 TERF2IPQ9NYB0 399 aa19.1■□□□□ 0.65
C9orf3-202ENST00000297979 BLMP54132 1417 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-202ENST00000297979 PODXL2Q9NZ53 605 aa19.1■□□□□ 0.65
C9orf3-202ENST00000297979 ROBO2Q9HCK4 1378 aa19.09■□□□□ 0.65
C9orf3-202ENST00000297979 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
C9orf3-202ENST00000297979 SLC26A8Q96RN1 970 aa19.09■□□□□ 0.65
C9orf3-202ENST00000297979 WASLO00401 505 aaPredicted RBP19.08■□□□□ 0.65
C9orf3-202ENST00000297979 TBX22Q9Y458 520 aa19.08■□□□□ 0.65
C9orf3-202ENST00000297979 PTPRUQ92729 1446 aa19.07■□□□□ 0.64
C9orf3-202ENST00000297979 ATP7BP35670 1465 aa19.07■□□□□ 0.64
C9orf3-202ENST00000297979 ADGRB2O60241 1585 aa19.07■□□□□ 0.64
C9orf3-202ENST00000297979 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-202ENST00000297979 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.64
C9orf3-202ENST00000297979 CABP1Q9NZU7 370 aa19.06■□□□□ 0.64
C9orf3-202ENST00000297979 SETD1BQ9UPS6 1966 aaKnown RBP19.05■□□□□ 0.64
C9orf3-202ENST00000297979 SUPT16HQ9Y5B9 1047 aaKnown RBP19.04■□□□□ 0.64
C9orf3-202ENST00000297979 ANKRD26Q9UPS8 1709 aa19.04■□□□□ 0.64
C9orf3-202ENST00000297979 ADAMTS8Q9UP79 889 aa19.04■□□□□ 0.64
C9orf3-202ENST00000297979 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
C9orf3-202ENST00000297979 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
C9orf3-202ENST00000297979 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
C9orf3-202ENST00000297979 NEFLP07196 543 aa19.03■□□□□ 0.64
C9orf3-202ENST00000297979 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
C9orf3-202ENST00000297979 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
C9orf3-202ENST00000297979 PPIP5K1Q6PFW1 1433 aa19.02■□□□□ 0.64
C9orf3-202ENST00000297979 AMOTL2Q9Y2J4 779 aa19.02■□□□□ 0.64
C9orf3-202ENST00000297979 XRN1Q8IZH2 1706 aaKnown RBP19.02■□□□□ 0.64
C9orf3-202ENST00000297979 KIF20BQ96Q89 1820 aa19.01■□□□□ 0.63
C9orf3-202ENST00000297979 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-202ENST00000297979 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
C9orf3-202ENST00000297979 NUDT16Q96DE0 195 aaKnown RBP19■□□□□ 0.63
C9orf3-202ENST00000297979 PIK3R4Q99570 1358 aa19■□□□□ 0.63
C9orf3-202ENST00000297979 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
C9orf3-202ENST00000297979 ARXQ96QS3 562 aa18.99■□□□□ 0.63
C9orf3-202ENST00000297979 NUDCQ9Y266 331 aa18.99■□□□□ 0.63
C9orf3-202ENST00000297979 FKBP8Q14318 412 aa18.99■□□□□ 0.63
C9orf3-202ENST00000297979 CPSF1Q10570 1443 aaKnown RBP18.98■□□□□ 0.63
C9orf3-202ENST00000297979 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
C9orf3-202ENST00000297979 FYB1O15117 783 aa18.97■□□□□ 0.63
C9orf3-202ENST00000297979 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
C9orf3-202ENST00000297979 SHPRHQ149N8 1683 aa18.97■□□□□ 0.63
C9orf3-202ENST00000297979 UBE2Q2Q8WVN8 375 aa18.97■□□□□ 0.63
C9orf3-202ENST00000297979 ITSN1Q15811 1721 aa18.96■□□□□ 0.63
C9orf3-202ENST00000297979 TOPAZ1Q8N9V7 1692 aa18.96■□□□□ 0.63
C9orf3-202ENST00000297979 MON2Q7Z3U7 1717 aa18.96■□□□□ 0.63
C9orf3-202ENST00000297979 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
C9orf3-202ENST00000297979 EDC4Q6P2E9 1401 aaKnown RBP18.96■□□□□ 0.62
C9orf3-202ENST00000297979 PRR36Q9H6K5 1346 aa18.95■□□□□ 0.62
C9orf3-202ENST00000297979 MTHFSP49914 203 aa18.95■□□□□ 0.62
C9orf3-202ENST00000297979 PDE3BQ13370 1112 aa18.95■□□□□ 0.62
C9orf3-202ENST00000297979 SALL2Q9Y467 1007 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-202ENST00000297979 CFAP53Q96M91 514 aa18.94■□□□□ 0.62
C9orf3-202ENST00000297979 NCKAP5LQ9HCH0 1330 aa18.93■□□□□ 0.62
C9orf3-202ENST00000297979 CHD2O14647 1828 aaKnown RBP18.91■□□□□ 0.62
C9orf3-202ENST00000297979 KCNA6P17658 529 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms