RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 PDE3BQ13370 1112 aa4.03□□□□□ -1.76
HDX-201ENST00000297977 C1orf141Q5JVX7 400 aa4.03□□□□□ -1.76
HDX-201ENST00000297977 PMFBP1Q8TBY8 1022 aa4.03□□□□□ -1.76
HDX-201ENST00000297977 NINLQ9Y2I6 1382 aa4.03□□□□□ -1.76
HDX-201ENST00000297977 SLAIN2Q9P270 581 aa4.03□□□□□ -1.76
HDX-201ENST00000297977 ADGRF5Q8IZF2 1346 aa4.03□□□□□ -1.76
HDX-201ENST00000297977 SAMD9LQ8IVG5 1584 aa4.03□□□□□ -1.76
HDX-201ENST00000297977 KRT28Q7Z3Y7 464 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 LTV1Q96GA3 475 aaPredicted RBP4.02□□□□□ -1.77
HDX-201ENST00000297977 PZPP20742 1482 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 KDM5DQ9BY66 1539 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 SETD1BQ9UPS6 1966 aaKnown RBP4.02□□□□□ -1.77
HDX-201ENST00000297977 PTMSP20962 102 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 CC2D1BQ5T0F9 858 aaKnown RBP4.02□□□□□ -1.77
HDX-201ENST00000297977 TMX4Q9H1E5 349 aaPredicted RBP4.02□□□□□ -1.77
HDX-201ENST00000297977 CABP2Q9NPB3 220 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 A2ML1A8K2U0 1454 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 TTC37Q6PGP7 1564 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 TEFQ10587 303 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 CABP1Q9NZU7 370 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 C11orf95C9JLR9 678 aaPredicted RBP4.02□□□□□ -1.77
HDX-201ENST00000297977 FAM9BQ8IZU0 186 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 TSPOAP1O95153 1857 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 DNMT1P26358 1616 aaKnown RBP4.02□□□□□ -1.77
HDX-201ENST00000297977 SMG6Q86US8 1419 aaKnown RBP4.02□□□□□ -1.77
HDX-201ENST00000297977 PLEKHG1Q9ULL1 1385 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 MS4A1P11836 297 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 PDE4CQ08493 712 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 PREX2Q70Z35 1606 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 ARHGEF12Q9NZN5 1544 aa4.02□□□□□ -1.77
HDX-201ENST00000297977 ABCC11Q96J66 1382 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 HSP90AB1P08238 724 aaKnown RBP4.01□□□□□ -1.77
HDX-201ENST00000297977 TATP17735 454 aaPredicted RBP4.01□□□□□ -1.77
HDX-201ENST00000297977 NBPF1Q3BBV0 1214 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 TOM1L2Q6ZVM7 507 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 CERKQ8TCT0 537 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 PANK3Q9H999 370 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 SCAF11Q99590 1463 aaKnown RBP4.01□□□□□ -1.77
HDX-201ENST00000297977 TTC21AQ8NDW8 1320 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 WAPLQ7Z5K2 1190 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 PTPRMP28827 1452 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 DIAPH1O60610 1272 aaKnown RBP4.01□□□□□ -1.77
HDX-201ENST00000297977 LTKP29376 864 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 PLEKHO1Q53GL0 409 aaPredicted RBP4.01□□□□□ -1.77
HDX-201ENST00000297977 PTPRKQ15262 1439 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 EFCAB6Q5THR3 1501 aa4.01□□□□□ -1.77
HDX-201ENST00000297977 TAF7LQ5H9L4 462 aa4□□□□□ -1.77
HDX-201ENST00000297977 TMEM94Q12767 1356 aa4□□□□□ -1.77
HDX-201ENST00000297977 ERVK-7P63135 1459 aa4□□□□□ -1.77
HDX-201ENST00000297977 UGGT1Q9NYU2 1555 aa4□□□□□ -1.77
HDX-201ENST00000297977 TTC5Q8N0Z6 440 aa4□□□□□ -1.77
HDX-201ENST00000297977 STRN4Q9NRL3 753 aa4□□□□□ -1.77
HDX-201ENST00000297977 HNRNPUQ00839 825 aaKnown RBP eCLIP4□□□□□ -1.77
HDX-201ENST00000297977 UBE2Q2Q8WVN8 375 aa4□□□□□ -1.77
HDX-201ENST00000297977 CDCA7Q9BWT1 371 aaPredicted RBP4□□□□□ -1.77
HDX-201ENST00000297977 ARHGEF10O15013 1369 aa4□□□□□ -1.77
HDX-201ENST00000297977 ADAMTS2O95450 1211 aa4□□□□□ -1.77
HDX-201ENST00000297977 TRPM2O94759 1503 aa4□□□□□ -1.77
HDX-201ENST00000297977 ARHGEF40Q8TER5 1519 aa4□□□□□ -1.77
HDX-201ENST00000297977 BRD4O60885 1362 aaPredicted RBP3.99□□□□□ -1.77
HDX-201ENST00000297977 SLC12A5Q9H2X9 1139 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 SPG7Q9UQ90 795 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 NBPF8Q3BBV2 869 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 GAS2L2Q8NHY3 880 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 STK31Q9BXU1 1019 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 MYH16Q9H6N6 1097 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 COL17A1Q9UMD9 1497 aaPredicted RBP3.99□□□□□ -1.77
HDX-201ENST00000297977 ZC3H6P61129 1189 aaKnown RBP3.99□□□□□ -1.77
HDX-201ENST00000297977 NEUROD2Q15784 382 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 GGNBP2Q9H3C7 697 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 GTF2E1P29083 439 aaPredicted RBP3.99□□□□□ -1.77
HDX-201ENST00000297977 USP35Q9P2H5 1018 aa3.99□□□□□ -1.77
HDX-201ENST00000297977 NUTM2GQ5VZR2 741 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 ZNF772Q68DY9 489 aaPredicted RBP3.98□□□□□ -1.77
HDX-201ENST00000297977 ZMYM4Q5VZL5 1548 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 YTHDC2Q9H6S0 1430 aaKnown RBP3.98□□□□□ -1.77
HDX-201ENST00000297977 EXOC5O00471 708 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 ZNF335Q9H4Z2 1342 aaPredicted RBP3.98□□□□□ -1.77
HDX-201ENST00000297977 MAST1Q9Y2H9 1570 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 SYTL4Q96C24 671 aaPredicted RBP3.98□□□□□ -1.77
HDX-201ENST00000297977 ZFYVE9O95405 1425 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 ABCC3O15438 1527 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 KDM4FA0A1W2PPD8 638 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 ACEP12821 1306 aa3.98□□□□□ -1.77
HDX-201ENST00000297977 XPCQ01831 940 aaPredicted RBP3.98□□□□□ -1.77
HDX-201ENST00000297977 RBM33Q96EV2 1170 aaKnown RBP3.98□□□□□ -1.77
HDX-201ENST00000297977 LAS1LQ9Y4W2 734 aaKnown RBP3.98□□□□□ -1.77
HDX-201ENST00000297977 IPO8O15397 1037 aaKnown RBP3.97□□□□□ -1.77
HDX-201ENST00000297977 PNISRQ8TF01 805 aaKnown RBP3.97□□□□□ -1.77
HDX-201ENST00000297977 NSD2O96028 1365 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 PLEKHG3A1L390 1219 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 MSH5O43196 834 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 AMOTQ4VCS5 1084 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 SALL2Q9Y467 1007 aaPredicted RBP3.97□□□□□ -1.77
HDX-201ENST00000297977 MYBBP1AQ9BQG0 1328 aaKnown RBP3.97□□□□□ -1.77
HDX-201ENST00000297977 PTPRTO14522 1441 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 PLXNC1O60486 1568 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 C8orf37Q96NL8 207 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 KDM5CP41229 1560 aa3.97□□□□□ -1.77
HDX-201ENST00000297977 TRPC5Q9UL62 973 aaPredicted RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms