RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 UBTFL1P0CB47 393 aaPredicted RBP20.31■□□□□ 0.84
CNTNAP3-201ENST00000297668 ZNF771Q7L3S4 317 aaPredicted RBP20.31■□□□□ 0.84
CNTNAP3-201ENST00000297668 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
CNTNAP3-201ENST00000297668 VPS37DQ86XT2 251 aa20.31■□□□□ 0.84
CNTNAP3-201ENST00000297668 CABP2Q9NPB3 220 aa20.31■□□□□ 0.84
CNTNAP3-201ENST00000297668 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
CNTNAP3-201ENST00000297668 ERICH2A1L162 156 aa20.3■□□□□ 0.84
CNTNAP3-201ENST00000297668 SAFBQ15424 915 aaKnown RBP eCLIP20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 DHX16O60231 1041 aaKnown RBP20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 RALYLQ86SE5 291 aaKnown RBP20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 RAD21O60216 631 aa20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
CNTNAP3-201ENST00000297668 RIC3Q7Z5B4 369 aa20.28■□□□□ 0.84
CNTNAP3-201ENST00000297668 NEUROD6Q96NK8 337 aa20.28■□□□□ 0.84
CNTNAP3-201ENST00000297668 IFT57Q9NWB7 429 aa20.28■□□□□ 0.84
CNTNAP3-201ENST00000297668 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
CNTNAP3-201ENST00000297668 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.84
CNTNAP3-201ENST00000297668 FBXW7Q969H0 707 aa20.27■□□□□ 0.84
CNTNAP3-201ENST00000297668 FOSBP53539 338 aa20.27■□□□□ 0.84
CNTNAP3-201ENST00000297668 SYTL4Q96C24 671 aaPredicted RBP20.27■□□□□ 0.84
CNTNAP3-201ENST00000297668 PPP2R1AP30153 589 aa20.27■□□□□ 0.83
CNTNAP3-201ENST00000297668 KIF21BO75037 1637 aa20.26■□□□□ 0.83
CNTNAP3-201ENST00000297668 GNAI3P08754 354 aa20.26■□□□□ 0.83
CNTNAP3-201ENST00000297668 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.26■□□□□ 0.83
CNTNAP3-201ENST00000297668 AIMP1Q12904 312 aaKnown RBP20.26■□□□□ 0.83
CNTNAP3-201ENST00000297668 CLASRPQ8N2M8 674 aaKnown RBP20.25■□□□□ 0.83
CNTNAP3-201ENST00000297668 TRAK2O60296 914 aa20.25■□□□□ 0.83
CNTNAP3-201ENST00000297668 TEX35Q5T0J7 233 aa20.25■□□□□ 0.83
CNTNAP3-201ENST00000297668 TRIM34Q9BYJ4 488 aa20.25■□□□□ 0.83
CNTNAP3-201ENST00000297668 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
CNTNAP3-201ENST00000297668 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 RNF214Q8ND24 703 aa20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 TCEAL9Q9UHQ7 104 aa20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 PSMA5P28066 241 aa20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 PDE3AQ14432 1141 aa20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 EXOSC9Q06265 439 aaKnown RBP20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 CNTROBQ8N137 903 aa20.24■□□□□ 0.83
CNTNAP3-201ENST00000297668 SDF4Q9BRK5 362 aa20.23■□□□□ 0.83
CNTNAP3-201ENST00000297668 NINLQ9Y2I6 1382 aa20.23■□□□□ 0.83
CNTNAP3-201ENST00000297668 NCOA2Q15596 1464 aa20.23■□□□□ 0.83
CNTNAP3-201ENST00000297668 SURF6O75683 361 aaKnown RBP20.23■□□□□ 0.83
CNTNAP3-201ENST00000297668 MNS1Q8NEH6 495 aa20.23■□□□□ 0.83
CNTNAP3-201ENST00000297668 MBD3O95983 291 aa20.22■□□□□ 0.83
CNTNAP3-201ENST00000297668 WWC1Q8IX03 1113 aa20.22■□□□□ 0.83
CNTNAP3-201ENST00000297668 FYCO1Q9BQS8 1478 aa20.22■□□□□ 0.83
CNTNAP3-201ENST00000297668 NEK4P51957 841 aa20.22■□□□□ 0.83
CNTNAP3-201ENST00000297668 NLRP6P59044 892 aa20.22■□□□□ 0.83
CNTNAP3-201ENST00000297668 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
CNTNAP3-201ENST00000297668 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
CNTNAP3-201ENST00000297668 FSD1Q9BTV5 496 aa20.21■□□□□ 0.83
CNTNAP3-201ENST00000297668 MSH5O43196 834 aa20.21■□□□□ 0.83
CNTNAP3-201ENST00000297668 ARGLU1Q9NWB6 273 aaPredicted RBP20.21■□□□□ 0.83
CNTNAP3-201ENST00000297668 PRKAR2BP31323 418 aa20.21■□□□□ 0.83
CNTNAP3-201ENST00000297668 NAT10Q9H0A0 1025 aaKnown RBP20.21■□□□□ 0.83
CNTNAP3-201ENST00000297668 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
CNTNAP3-201ENST00000297668 CCDC30Q5VVM6 783 aa20.2■□□□□ 0.82
CNTNAP3-201ENST00000297668 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
CNTNAP3-201ENST00000297668 MCM2P49736 904 aa20.2■□□□□ 0.82
CNTNAP3-201ENST00000297668 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
CNTNAP3-201ENST00000297668 RABEP1Q15276 862 aa20.19■□□□□ 0.82
CNTNAP3-201ENST00000297668 R3HCC1Q9Y3T6 440 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3-201ENST00000297668 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
CNTNAP3-201ENST00000297668 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
CNTNAP3-201ENST00000297668 GCC1Q96CN9 775 aa20.18■□□□□ 0.82
CNTNAP3-201ENST00000297668 TWISTNBQ3B726 338 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3-201ENST00000297668 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
CNTNAP3-201ENST00000297668 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
CNTNAP3-201ENST00000297668 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
CNTNAP3-201ENST00000297668 PDCP20941 246 aa20.17■□□□□ 0.82
CNTNAP3-201ENST00000297668 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
CNTNAP3-201ENST00000297668 NBPF1Q3BBV0 1214 aa20.16■□□□□ 0.82
CNTNAP3-201ENST00000297668 CCDC27Q2M243 656 aa20.16■□□□□ 0.82
CNTNAP3-201ENST00000297668 LETM1O95202 739 aaPredicted RBP20.16■□□□□ 0.82
CNTNAP3-201ENST00000297668 PRPF40AO75400 957 aaKnown RBP20.15■□□□□ 0.82
CNTNAP3-201ENST00000297668 AFAP1Q8N556 730 aa20.15■□□□□ 0.82
CNTNAP3-201ENST00000297668 TRIM5Q9C035 493 aa20.15■□□□□ 0.82
CNTNAP3-201ENST00000297668 BCAR3O75815 825 aa20.15■□□□□ 0.82
CNTNAP3-201ENST00000297668 XBP1P17861 261 aa20.14■□□□□ 0.82
CNTNAP3-201ENST00000297668 BRMS1Q9HCU9 246 aa20.14■□□□□ 0.82
CNTNAP3-201ENST00000297668 ACBD3Q9H3P7 528 aa20.14■□□□□ 0.81
CNTNAP3-201ENST00000297668 C1orf115Q9H7X2 142 aa20.14■□□□□ 0.81
CNTNAP3-201ENST00000297668 RUFY1Q96T51 708 aa20.14■□□□□ 0.81
CNTNAP3-201ENST00000297668 KINO60870 393 aaKnown RBP20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 NAP1L1P55209 391 aaKnown RBP20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 UBE2Q2Q8WVN8 375 aa20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 HSP90B2PQ58FF3 399 aa20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 BACH2Q9BYV9 841 aa20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 CCDC43Q96MW1 224 aaKnown RBP20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 NOB1Q9ULX3 412 aaKnown RBP20.13■□□□□ 0.81
CNTNAP3-201ENST00000297668 HIP1O00291 1037 aa20.12■□□□□ 0.81
CNTNAP3-201ENST00000297668 GNAI2P04899 355 aa20.12■□□□□ 0.81
CNTNAP3-201ENST00000297668 PDILTQ8N807 584 aa20.12■□□□□ 0.81
CNTNAP3-201ENST00000297668 FAM69CQ0P6D2 419 aa20.12■□□□□ 0.81
CNTNAP3-201ENST00000297668 RBM33Q96EV2 1170 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms