RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 FER1L4A9Z1Z3 1794 aa18.29■□□□□ 0.52
CHMP4C-201ENST00000297265 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
CHMP4C-201ENST00000297265 MINK1Q8N4C8 1332 aaPredicted RBP18.28■□□□□ 0.52
CHMP4C-201ENST00000297265 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
CHMP4C-201ENST00000297265 USP32Q8NFA0 1604 aa18.27■□□□□ 0.52
CHMP4C-201ENST00000297265 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.52
CHMP4C-201ENST00000297265 WAPLQ7Z5K2 1190 aa18.27■□□□□ 0.52
CHMP4C-201ENST00000297265 POGKQ9P215 609 aa18.27■□□□□ 0.52
CHMP4C-201ENST00000297265 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.51
CHMP4C-201ENST00000297265 LTKP29376 864 aa18.26■□□□□ 0.51
CHMP4C-201ENST00000297265 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
CHMP4C-201ENST00000297265 ADAMTS8Q9UP79 889 aa18.26■□□□□ 0.51
CHMP4C-201ENST00000297265 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
CHMP4C-201ENST00000297265 ADAMTS13Q76LX8 1427 aa18.25■□□□□ 0.51
CHMP4C-201ENST00000297265 CD163L1Q9NR16 1453 aa18.25■□□□□ 0.51
CHMP4C-201ENST00000297265 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
CHMP4C-201ENST00000297265 CDK19Q9BWU1 502 aa18.23■□□□□ 0.51
CHMP4C-201ENST00000297265 A0A1W2PP64 1363 aa18.22■□□□□ 0.51
CHMP4C-201ENST00000297265 NINLQ9Y2I6 1382 aa18.22■□□□□ 0.51
CHMP4C-201ENST00000297265 TECPR2O15040 1411 aa18.22■□□□□ 0.51
CHMP4C-201ENST00000297265 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
CHMP4C-201ENST00000297265 ATAD2Q6PL18 1390 aa18.22■□□□□ 0.51
CHMP4C-201ENST00000297265 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
CHMP4C-201ENST00000297265 MED14O60244 1454 aa18.21■□□□□ 0.51
CHMP4C-201ENST00000297265 ARHGAP23Q9P227 1491 aa18.21■□□□□ 0.51
CHMP4C-201ENST00000297265 SLIT1O75093 1534 aa18.2■□□□□ 0.5
CHMP4C-201ENST00000297265 PLEKHG1Q9ULL1 1385 aa18.2■□□□□ 0.5
CHMP4C-201ENST00000297265 SIRT1Q96EB6 747 aa18.2■□□□□ 0.5
CHMP4C-201ENST00000297265 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
CHMP4C-201ENST00000297265 NEFLP07196 543 aa18.19■□□□□ 0.5
CHMP4C-201ENST00000297265 TXNDC2Q86VQ3 553 aa18.19■□□□□ 0.5
CHMP4C-201ENST00000297265 FAM135BQ49AJ0 1406 aa18.19■□□□□ 0.5
CHMP4C-201ENST00000297265 POLR3AO14802 1390 aaPredicted RBP18.18■□□□□ 0.5
CHMP4C-201ENST00000297265 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
CHMP4C-201ENST00000297265 BCANQ96GW7 911 aa18.18■□□□□ 0.5
CHMP4C-201ENST00000297265 CPS1P31327 1500 aa18.18■□□□□ 0.5
CHMP4C-201ENST00000297265 SALL2Q9Y467 1007 aaPredicted RBP18.17■□□□□ 0.5
CHMP4C-201ENST00000297265 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
CHMP4C-201ENST00000297265 CABP1Q9NZU7 370 aa18.16■□□□□ 0.5
CHMP4C-201ENST00000297265 NSD2O96028 1365 aa18.15■□□□□ 0.5
CHMP4C-201ENST00000297265 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
CHMP4C-201ENST00000297265 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
CHMP4C-201ENST00000297265 WASLO00401 505 aaPredicted RBP18.14■□□□□ 0.49
CHMP4C-201ENST00000297265 WDR43Q15061 677 aaKnown RBP eCLIP18.14■□□□□ 0.49
CHMP4C-201ENST00000297265 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
CHMP4C-201ENST00000297265 PTPRUQ92729 1446 aa18.14■□□□□ 0.49
CHMP4C-201ENST00000297265 SHPRHQ149N8 1683 aa18.13■□□□□ 0.49
CHMP4C-201ENST00000297265 FYB1O15117 783 aa18.13■□□□□ 0.49
CHMP4C-201ENST00000297265 TNNT2P45379 298 aaPredicted RBP18.13■□□□□ 0.49
CHMP4C-201ENST00000297265 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
CHMP4C-201ENST00000297265 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
CHMP4C-201ENST00000297265 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
CHMP4C-201ENST00000297265 THEMISQ8N1K5 641 aaPredicted RBP18.12■□□□□ 0.49
CHMP4C-201ENST00000297265 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
CHMP4C-201ENST00000297265 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
CHMP4C-201ENST00000297265 ADAMTSL3P82987 1691 aa18.11■□□□□ 0.49
CHMP4C-201ENST00000297265 EID1Q9Y6B2 187 aa18.11■□□□□ 0.49
CHMP4C-201ENST00000297265 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
CHMP4C-201ENST00000297265 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.1■□□□□ 0.49
CHMP4C-201ENST00000297265 MTHFSP49914 203 aa18.1■□□□□ 0.49
CHMP4C-201ENST00000297265 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
CHMP4C-201ENST00000297265 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
CHMP4C-201ENST00000297265 CPSF1Q10570 1443 aaKnown RBP18.09■□□□□ 0.49
CHMP4C-201ENST00000297265 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
CHMP4C-201ENST00000297265 ATP7BP35670 1465 aa18.09■□□□□ 0.49
CHMP4C-201ENST00000297265 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
CHMP4C-201ENST00000297265 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
CHMP4C-201ENST00000297265 NCKAP5LQ9HCH0 1330 aa18.07■□□□□ 0.48
CHMP4C-201ENST00000297265 ERICH6BQ5W0A0 696 aa18.07■□□□□ 0.48
CHMP4C-201ENST00000297265 CCDC146Q8IYE0 955 aa18.07■□□□□ 0.48
CHMP4C-201ENST00000297265 NUDT16Q96DE0 195 aaKnown RBP18.06■□□□□ 0.48
CHMP4C-201ENST00000297265 PRR36Q9H6K5 1346 aa18.06■□□□□ 0.48
CHMP4C-201ENST00000297265 PPIP5K1Q6PFW1 1433 aa18.06■□□□□ 0.48
CHMP4C-201ENST00000297265 ADGRB2O60241 1585 aa18.06■□□□□ 0.48
CHMP4C-201ENST00000297265 KIF20BQ96Q89 1820 aa18.04■□□□□ 0.48
CHMP4C-201ENST00000297265 APAF1O14727 1248 aa18.04■□□□□ 0.48
CHMP4C-201ENST00000297265 AMOTL2Q9Y2J4 779 aa18.04■□□□□ 0.48
CHMP4C-201ENST00000297265 CCDC61Q9Y6R9 512 aa18.04■□□□□ 0.48
CHMP4C-201ENST00000297265 DIP2AQ14689 1571 aa18.02■□□□□ 0.48
CHMP4C-201ENST00000297265 CDC42BPGQ6DT37 1551 aa18.02■□□□□ 0.47
CHMP4C-201ENST00000297265 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
CHMP4C-201ENST00000297265 ZNF142P52746 1687 aaPredicted RBP18.01■□□□□ 0.47
CHMP4C-201ENST00000297265 MON2Q7Z3U7 1717 aa18■□□□□ 0.47
CHMP4C-201ENST00000297265 PTCH1Q13635 1447 aa18■□□□□ 0.47
CHMP4C-201ENST00000297265 SETD1BQ9UPS6 1966 aaKnown RBP18■□□□□ 0.47
CHMP4C-201ENST00000297265 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
CHMP4C-201ENST00000297265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18■□□□□ 0.47
CHMP4C-201ENST00000297265 TRMT2AQ8IZ69 625 aaKnown RBP18■□□□□ 0.47
CHMP4C-201ENST00000297265 RCAN3Q9UKA8 241 aa18■□□□□ 0.47
CHMP4C-201ENST00000297265 AKAP12Q02952 1782 aa18■□□□□ 0.47
CHMP4C-201ENST00000297265 XRN1Q8IZH2 1706 aaKnown RBP18■□□□□ 0.47
CHMP4C-201ENST00000297265 EDC4Q6P2E9 1401 aaKnown RBP18■□□□□ 0.47
CHMP4C-201ENST00000297265 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
CHMP4C-201ENST00000297265 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
CHMP4C-201ENST00000297265 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
CHMP4C-201ENST00000297265 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
CHMP4C-201ENST00000297265 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
CHMP4C-201ENST00000297265 FBLN1P23142 703 aa17.97■□□□□ 0.47
CHMP4C-201ENST00000297265 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
CHMP4C-201ENST00000297265 SLFN5Q08AF3 891 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms