RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 TMEM132EQ6IEE7 984 aa24.05■■□□□ 1.44
NPM1-201ENST00000296930 HRCP23327 699 aa24.04■■□□□ 1.44
NPM1-201ENST00000296930 ORAI2Q96SN7 254 aa24.04■■□□□ 1.44
NPM1-201ENST00000296930 NRXN1Q9ULB1 1477 aa24.04■■□□□ 1.44
NPM1-201ENST00000296930 NUTM2BA6NNL0 878 aaPredicted RBP24.03■■□□□ 1.44
NPM1-201ENST00000296930 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
NPM1-201ENST00000296930 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
NPM1-201ENST00000296930 YTHDC2Q9H6S0 1430 aaKnown RBP24.03■■□□□ 1.44
NPM1-201ENST00000296930 ZNF772Q68DY9 489 aaPredicted RBP24.03■■□□□ 1.44
NPM1-201ENST00000296930 C14orf93Q9H972 538 aaKnown RBP24.03■■□□□ 1.44
NPM1-201ENST00000296930 WAPLQ7Z5K2 1190 aa24.02■■□□□ 1.44
NPM1-201ENST00000296930 PNPLA6Q8IY17 1366 aa24.02■■□□□ 1.44
NPM1-201ENST00000296930 SOS2Q07890 1332 aaPredicted RBP24■■□□□ 1.43
NPM1-201ENST00000296930 SIRT1Q96EB6 747 aa23.98■■□□□ 1.43
NPM1-201ENST00000296930 DHX57Q6P158 1386 aaKnown RBP23.97■■□□□ 1.43
NPM1-201ENST00000296930 PLEKHH1Q9ULM0 1364 aa23.97■■□□□ 1.43
NPM1-201ENST00000296930 ESCO1Q5FWF5 840 aa23.97■■□□□ 1.43
NPM1-201ENST00000296930 CFAP70Q5T0N1 1121 aa23.97■■□□□ 1.43
NPM1-201ENST00000296930 NPHP3Q7Z494 1330 aa23.94■■□□□ 1.42
NPM1-201ENST00000296930 FMN2Q9NZ56 1722 aa23.94■■□□□ 1.42
NPM1-201ENST00000296930 AFF2P51816 1311 aa23.92■■□□□ 1.42
NPM1-201ENST00000296930 NUTM2FA1L443 756 aa23.91■■□□□ 1.42
NPM1-201ENST00000296930 STAC3Q96MF2 364 aa23.91■■□□□ 1.42
NPM1-201ENST00000296930 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
NPM1-201ENST00000296930 FOXO3O43524 673 aa23.89■■□□□ 1.42
NPM1-201ENST00000296930 COL22A1Q8NFW1 1626 aaPredicted RBP23.89■■□□□ 1.42
NPM1-201ENST00000296930 PXDNQ92626 1479 aa23.89■■□□□ 1.41
NPM1-201ENST00000296930 DLC1Q96QB1 1528 aa23.88■■□□□ 1.41
NPM1-201ENST00000296930 DCAF11Q8TEB1 546 aa23.88■■□□□ 1.41
NPM1-201ENST00000296930 RXRBP28702 533 aa23.88■■□□□ 1.41
NPM1-201ENST00000296930 KIF1AQ12756 1690 aa23.87■■□□□ 1.41
NPM1-201ENST00000296930 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
NPM1-201ENST00000296930 ADGRB1O14514 1584 aa23.86■■□□□ 1.41
NPM1-201ENST00000296930 ADAMTS2O95450 1211 aa23.86■■□□□ 1.41
NPM1-201ENST00000296930 PRAM1Q96QH2 718 aa23.86■■□□□ 1.41
NPM1-201ENST00000296930 RGPD8O14715 1765 aaPredicted RBP23.84■■□□□ 1.41
NPM1-201ENST00000296930 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
NPM1-201ENST00000296930 POGKQ9P215 609 aa23.84■■□□□ 1.41
NPM1-201ENST00000296930 XPCQ01831 940 aaPredicted RBP23.83■■□□□ 1.41
NPM1-201ENST00000296930 CDK12Q9NYV4 1490 aaPredicted RBP23.83■■□□□ 1.41
NPM1-201ENST00000296930 SAFB2Q14151 953 aaKnown RBP eCLIP23.83■■□□□ 1.4
NPM1-201ENST00000296930 QTRT2Q9H974 415 aaKnown RBP23.8■■□□□ 1.4
NPM1-201ENST00000296930 TRAK1Q9UPV9 953 aa23.8■■□□□ 1.4
NPM1-201ENST00000296930 ADGRB2O60241 1585 aa23.79■■□□□ 1.4
NPM1-201ENST00000296930 PHF8Q9UPP1 1060 aa23.79■■□□□ 1.4
NPM1-201ENST00000296930 MARF1Q9Y4F3 1742 aaKnown RBP23.78■■□□□ 1.4
NPM1-201ENST00000296930 RBM6P78332 1123 aaKnown RBP23.78■■□□□ 1.4
NPM1-201ENST00000296930 ANKARQ7Z5J8 1434 aa23.77■■□□□ 1.4
NPM1-201ENST00000296930 SPATA31A3Q5VYP0 1347 aa23.76■■□□□ 1.39
NPM1-201ENST00000296930 KRT28Q7Z3Y7 464 aa23.76■■□□□ 1.39
NPM1-201ENST00000296930 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
NPM1-201ENST00000296930 USP21Q9UK80 565 aa23.75■■□□□ 1.39
NPM1-201ENST00000296930 PSME1Q06323 249 aa23.74■■□□□ 1.39
NPM1-201ENST00000296930 USP32Q8NFA0 1604 aa23.74■■□□□ 1.39
NPM1-201ENST00000296930 EIF3AQ14152 1382 aaKnown RBP23.73■■□□□ 1.39
NPM1-201ENST00000296930 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
NPM1-201ENST00000296930 TRPC5Q9UL62 973 aaPredicted RBP23.72■■□□□ 1.39
NPM1-201ENST00000296930 MINK1Q8N4C8 1332 aaPredicted RBP23.72■■□□□ 1.39
NPM1-201ENST00000296930 ARHGEF28Q8N1W1 1705 aaKnown RBP23.71■■□□□ 1.39
NPM1-201ENST00000296930 RGS12O14924 1447 aa23.71■■□□□ 1.39
NPM1-201ENST00000296930 TNS3Q68CZ2 1445 aa23.71■■□□□ 1.39
NPM1-201ENST00000296930 KIAA1210Q9ULL0 1709 aa23.7■■□□□ 1.38
NPM1-201ENST00000296930 UPF1Q92900 1129 aaKnown RBP eCLIP23.7■■□□□ 1.38
NPM1-201ENST00000296930 SBNO1A3KN83 1393 aa23.69■■□□□ 1.38
NPM1-201ENST00000296930 TULP4Q9NRJ4 1543 aa23.68■■□□□ 1.38
NPM1-201ENST00000296930 ATRNO75882 1429 aa23.68■■□□□ 1.38
NPM1-201ENST00000296930 WASLO00401 505 aaPredicted RBP23.68■■□□□ 1.38
NPM1-201ENST00000296930 PMFBP1Q8TBY8 1022 aa23.68■■□□□ 1.38
NPM1-201ENST00000296930 BCL9LQ86UU0 1499 aa23.66■■□□□ 1.38
NPM1-201ENST00000296930 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
NPM1-201ENST00000296930 PRR36Q9H6K5 1346 aa23.64■■□□□ 1.37
NPM1-201ENST00000296930 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.64■■□□□ 1.37
NPM1-201ENST00000296930 HAP1P54257 671 aaPredicted RBP23.63■■□□□ 1.37
NPM1-201ENST00000296930 LMOD2Q6P5Q4 547 aa23.63■■□□□ 1.37
NPM1-201ENST00000296930 GPRASP1Q5JY77 1395 aa23.62■■□□□ 1.37
NPM1-201ENST00000296930 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
NPM1-201ENST00000296930 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
NPM1-201ENST00000296930 SLIT2O94813 1529 aa23.61■■□□□ 1.37
NPM1-201ENST00000296930 ABCA3Q99758 1704 aa23.6■■□□□ 1.37
NPM1-201ENST00000296930 CABLES1Q8TDN4 633 aa23.6■■□□□ 1.37
NPM1-201ENST00000296930 UNC5CLQ8IV45 518 aa23.59■■□□□ 1.37
NPM1-201ENST00000296930 NBPF1Q3BBV0 1214 aa23.57■■□□□ 1.36
NPM1-201ENST00000296930 NGDNQ8NEJ9 315 aaKnown RBP23.57■■□□□ 1.36
NPM1-201ENST00000296930 GJD4Q96KN9 370 aaPredicted RBP23.57■■□□□ 1.36
NPM1-201ENST00000296930 ALS2Q96Q42 1657 aa23.57■■□□□ 1.36
NPM1-201ENST00000296930 ATP7BP35670 1465 aa23.57■■□□□ 1.36
NPM1-201ENST00000296930 PLEKHG5O94827 1062 aa23.56■■□□□ 1.36
NPM1-201ENST00000296930 NUDT16Q96DE0 195 aaKnown RBP23.56■■□□□ 1.36
NPM1-201ENST00000296930 ATAD2Q6PL18 1390 aa23.55■■□□□ 1.36
NPM1-201ENST00000296930 NWD2Q9ULI1 1742 aa23.55■■□□□ 1.36
NPM1-201ENST00000296930 CDK19Q9BWU1 502 aa23.55■■□□□ 1.36
NPM1-201ENST00000296930 PLCH1Q4KWH8 1693 aa23.54■■□□□ 1.36
NPM1-201ENST00000296930 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
NPM1-201ENST00000296930 RALGAPBQ86X10 1494 aa23.51■■□□□ 1.35
NPM1-201ENST00000296930 TOPAZ1Q8N9V7 1692 aa23.51■■□□□ 1.35
NPM1-201ENST00000296930 GLI3P10071 1580 aa23.51■■□□□ 1.35
NPM1-201ENST00000296930 PAK3O75914 559 aaPredicted RBP23.5■■□□□ 1.35
NPM1-201ENST00000296930 SIN3AQ96ST3 1273 aa23.5■■□□□ 1.35
NPM1-201ENST00000296930 CCDC61Q9Y6R9 512 aa23.5■■□□□ 1.35
NPM1-201ENST00000296930 CENPJQ9HC77 1338 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms