RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 PPRC1Q5VV67 1664 aaKnown RBP24.66■■□□□ 1.54
LSM12-201ENST00000293406 TRAK1Q9UPV9 953 aa24.66■■□□□ 1.54
LSM12-201ENST00000293406 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
LSM12-201ENST00000293406 USP19O94966 1318 aa24.66■■□□□ 1.54
LSM12-201ENST00000293406 CHGAP10645 457 aaKnown RBP24.66■■□□□ 1.54
LSM12-201ENST00000293406 RARSP54136 660 aaKnown RBP24.66■■□□□ 1.54
LSM12-201ENST00000293406 SLC12A5Q9H2X9 1139 aa24.66■■□□□ 1.54
LSM12-201ENST00000293406 FRAT2O75474 233 aaPredicted RBP24.65■■□□□ 1.54
LSM12-201ENST00000293406 TCP11L2Q8N4U5 519 aa24.65■■□□□ 1.54
LSM12-201ENST00000293406 ADGRB3O60242 1522 aa24.63■■□□□ 1.53
LSM12-201ENST00000293406 AAMPQ13685 434 aa24.63■■□□□ 1.53
LSM12-201ENST00000293406 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
LSM12-201ENST00000293406 IQSEC2Q5JU85 1478 aa24.63■■□□□ 1.53
LSM12-201ENST00000293406 WDR63Q8IWG1 891 aa24.62■■□□□ 1.53
LSM12-201ENST00000293406 LMTK2Q8IWU2 1503 aa24.62■■□□□ 1.53
LSM12-201ENST00000293406 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
LSM12-201ENST00000293406 SEC24BO95487 1268 aa24.61■■□□□ 1.53
LSM12-201ENST00000293406 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
LSM12-201ENST00000293406 BRPF3Q9ULD4 1205 aa24.61■■□□□ 1.53
LSM12-201ENST00000293406 QRICH2Q9H0J4 1663 aa24.59■■□□□ 1.53
LSM12-201ENST00000293406 MTHFSP49914 203 aa24.59■■□□□ 1.53
LSM12-201ENST00000293406 CFAP53Q96M91 514 aa24.59■■□□□ 1.53
LSM12-201ENST00000293406 KIDINS220Q9ULH0 1771 aa24.58■■□□□ 1.53
LSM12-201ENST00000293406 ZC3H13Q5T200 1668 aaKnown RBP24.58■■□□□ 1.53
LSM12-201ENST00000293406 BECN1Q14457 450 aa24.58■■□□□ 1.53
LSM12-201ENST00000293406 CCDC27Q2M243 656 aa24.57■■□□□ 1.52
LSM12-201ENST00000293406 ZNF518AQ6AHZ1 1483 aa24.57■■□□□ 1.52
LSM12-201ENST00000293406 RLBP1P12271 317 aa24.57■■□□□ 1.52
LSM12-201ENST00000293406 PCDHB15Q9Y5E8 787 aa24.57■■□□□ 1.52
LSM12-201ENST00000293406 TMEM132EQ6IEE7 984 aa24.56■■□□□ 1.52
LSM12-201ENST00000293406 ADGRB1O14514 1584 aa24.55■■□□□ 1.52
LSM12-201ENST00000293406 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
LSM12-201ENST00000293406 BCL2L13Q9BXK5 485 aa24.55■■□□□ 1.52
LSM12-201ENST00000293406 TNNQ9UQP3 1299 aa24.55■■□□□ 1.52
LSM12-201ENST00000293406 PPLO60437 1756 aa24.53■■□□□ 1.52
LSM12-201ENST00000293406 NLRP1Q9C000 1473 aa24.53■■□□□ 1.52
LSM12-201ENST00000293406 MYH16Q9H6N6 1097 aa24.53■■□□□ 1.52
LSM12-201ENST00000293406 ZMYM3Q14202 1370 aa24.53■■□□□ 1.52
LSM12-201ENST00000293406 UPF2Q9HAU5 1272 aaKnown RBP24.52■■□□□ 1.52
LSM12-201ENST00000293406 NPATQ14207 1427 aa24.52■■□□□ 1.52
LSM12-201ENST00000293406 RWDD1Q9H446 243 aaPredicted RBP24.51■■□□□ 1.51
LSM12-201ENST00000293406 PDZRN3Q9UPQ7 1066 aa24.51■■□□□ 1.51
LSM12-201ENST00000293406 ASXL2Q76L83 1435 aa24.5■■□□□ 1.51
LSM12-201ENST00000293406 RPGRIP1LQ68CZ1 1315 aa24.5■■□□□ 1.51
LSM12-201ENST00000293406 NCBP3Q53F19 620 aaKnown RBP24.5■■□□□ 1.51
LSM12-201ENST00000293406 U2AF1L5P0DN76 240 aaPredicted RBP24.48■■□□□ 1.51
LSM12-201ENST00000293406 U2AF1Q01081 240 aaKnown RBP eCLIP24.48■■□□□ 1.51
LSM12-201ENST00000293406 EVC2Q86UK5 1308 aa24.48■■□□□ 1.51
LSM12-201ENST00000293406 GGT6Q6P531 493 aa24.47■■□□□ 1.51
LSM12-201ENST00000293406 ANO8Q9HCE9 1232 aaPredicted RBP24.47■■□□□ 1.51
LSM12-201ENST00000293406 NSD2O96028 1365 aa24.47■■□□□ 1.51
LSM12-201ENST00000293406 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
LSM12-201ENST00000293406 PUS7Q96PZ0 661 aaKnown RBP24.47■■□□□ 1.51
LSM12-201ENST00000293406 MVPQ14764 893 aaKnown RBP24.46■■□□□ 1.51
LSM12-201ENST00000293406 TBC1D32Q96NH3 1257 aa24.46■■□□□ 1.51
LSM12-201ENST00000293406 SLKQ9H2G2 1235 aaPredicted RBP24.46■■□□□ 1.51
LSM12-201ENST00000293406 CFAP65Q6ZU64 1925 aaKnown RBP24.45■■□□□ 1.5
LSM12-201ENST00000293406 ZKSCAN2Q63HK3 967 aa24.44■■□□□ 1.5
LSM12-201ENST00000293406 FTSJ3Q8IY81 847 aaKnown RBP24.43■■□□□ 1.5
LSM12-201ENST00000293406 GLI2P10070 1586 aa24.43■■□□□ 1.5
LSM12-201ENST00000293406 TULP4Q9NRJ4 1543 aa24.42■■□□□ 1.5
LSM12-201ENST00000293406 CT47B1P0C2W7 299 aaPredicted RBP24.41■■□□□ 1.5
LSM12-201ENST00000293406 DZIP1LQ8IYY4 767 aaKnown RBP24.41■■□□□ 1.5
LSM12-201ENST00000293406 ADGRB2O60241 1585 aa24.41■■□□□ 1.5
LSM12-201ENST00000293406 ANTXR1Q9H6X2 564 aa24.4■■□□□ 1.5
LSM12-201ENST00000293406 FRMPD1Q5SYB0 1578 aa24.4■■□□□ 1.5
LSM12-201ENST00000293406 CABP2Q9NPB3 220 aa24.39■■□□□ 1.5
LSM12-201ENST00000293406 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.49
LSM12-201ENST00000293406 NUTM2DQ5VT03 806 aaPredicted RBP24.39■■□□□ 1.49
LSM12-201ENST00000293406 TSR2Q969E8 191 aaKnown RBP24.39■■□□□ 1.49
LSM12-201ENST00000293406 HECW2Q9P2P5 1572 aa24.39■■□□□ 1.49
LSM12-201ENST00000293406 TBC1D2Q9BYX2 928 aa24.38■■□□□ 1.49
LSM12-201ENST00000293406 POGKQ9P215 609 aa24.38■■□□□ 1.49
LSM12-201ENST00000293406 ARHGEF28Q8N1W1 1705 aaKnown RBP24.38■■□□□ 1.49
LSM12-201ENST00000293406 POGZQ7Z3K3 1410 aa24.38■■□□□ 1.49
LSM12-201ENST00000293406 SMC4Q9NTJ3 1288 aa24.37■■□□□ 1.49
LSM12-201ENST00000293406 MLH3Q9UHC1 1453 aa24.37■■□□□ 1.49
LSM12-201ENST00000293406 ABCC3O15438 1527 aa24.37■■□□□ 1.49
LSM12-201ENST00000293406 U2SURPO15042 1029 aaKnown RBP24.35■■□□□ 1.49
LSM12-201ENST00000293406 EXOSC9Q06265 439 aaKnown RBP24.35■■□□□ 1.49
LSM12-201ENST00000293406 TMPOP42166 694 aaKnown RBP24.33■■□□□ 1.49
LSM12-201ENST00000293406 SAFB2Q14151 953 aaKnown RBP eCLIP24.33■■□□□ 1.49
LSM12-201ENST00000293406 PLEKHF1Q96S99 279 aa24.33■■□□□ 1.49
LSM12-201ENST00000293406 CAMSAP1Q5T5Y3 1602 aa24.33■■□□□ 1.48
LSM12-201ENST00000293406 ABCC11Q96J66 1382 aa24.33■■□□□ 1.48
LSM12-201ENST00000293406 TRIM27P14373 513 aa24.33■■□□□ 1.48
LSM12-201ENST00000293406 CD109Q6YHK3 1445 aa24.32■■□□□ 1.48
LSM12-201ENST00000293406 A0A1W2PP64 1363 aa24.32■■□□□ 1.48
LSM12-201ENST00000293406 NEXMIFQ5QGS0 1516 aa24.32■■□□□ 1.48
LSM12-201ENST00000293406 DDX19BQ9UMR2 479 aa24.32■■□□□ 1.48
LSM12-201ENST00000293406 CFAP74Q9C0B2 1584 aa24.31■■□□□ 1.48
LSM12-201ENST00000293406 HDAC1Q13547 482 aaPredicted RBP24.31■■□□□ 1.48
LSM12-201ENST00000293406 SSH1Q8WYL5 1049 aa24.31■■□□□ 1.48
LSM12-201ENST00000293406 TRIM35Q9UPQ4 493 aa24.31■■□□□ 1.48
LSM12-201ENST00000293406 ITPRIPQ8IWB1 547 aa24.3■■□□□ 1.48
LSM12-201ENST00000293406 GGNBP2Q9H3C7 697 aa24.3■■□□□ 1.48
LSM12-201ENST00000293406 SRPK2P78362 688 aaKnown RBP24.3■■□□□ 1.48
LSM12-201ENST00000293406 ATF7IPQ6VMQ6 1270 aa24.3■■□□□ 1.48
LSM12-201ENST00000293406 PIK3C2BO00750 1634 aa24.29■■□□□ 1.48
LSM12-201ENST00000293406 NPM1P06748 294 aaKnown RBP eCLIP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms