RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
ABCF3-201ENST00000292808 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.91■□□□□ 0.62
ABCF3-201ENST00000292808 NSD3Q9BZ95 1437 aa18.9■□□□□ 0.62
ABCF3-201ENST00000292808 METP08581 1390 aa18.9■□□□□ 0.62
ABCF3-201ENST00000292808 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
ABCF3-201ENST00000292808 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
ABCF3-201ENST00000292808 KNDC1Q76NI1 1749 aa18.88■□□□□ 0.61
ABCF3-201ENST00000292808 PLEKHH1Q9ULM0 1364 aa18.88■□□□□ 0.61
ABCF3-201ENST00000292808 MINK1Q8N4C8 1332 aaPredicted RBP18.88■□□□□ 0.61
ABCF3-201ENST00000292808 ABCC11Q96J66 1382 aa18.87■□□□□ 0.61
ABCF3-201ENST00000292808 BLMP54132 1417 aaPredicted RBP18.87■□□□□ 0.61
ABCF3-201ENST00000292808 POGKQ9P215 609 aa18.86■□□□□ 0.61
ABCF3-201ENST00000292808 ADAMTS13Q76LX8 1427 aa18.86■□□□□ 0.61
ABCF3-201ENST00000292808 INSRP06213 1382 aa18.85■□□□□ 0.61
ABCF3-201ENST00000292808 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
ABCF3-201ENST00000292808 ARHGAP23Q9P227 1491 aa18.84■□□□□ 0.61
ABCF3-201ENST00000292808 TECPR2O15040 1411 aa18.84■□□□□ 0.61
ABCF3-201ENST00000292808 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
ABCF3-201ENST00000292808 SLIT1O75093 1534 aa18.83■□□□□ 0.61
ABCF3-201ENST00000292808 LTKP29376 864 aa18.83■□□□□ 0.61
ABCF3-201ENST00000292808 WAPLQ7Z5K2 1190 aa18.83■□□□□ 0.61
ABCF3-201ENST00000292808 CPS1P31327 1500 aa18.83■□□□□ 0.6
ABCF3-201ENST00000292808 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
ABCF3-201ENST00000292808 RIMS1Q86UR5 1692 aaKnown RBP18.82■□□□□ 0.6
ABCF3-201ENST00000292808 PLEKHG1Q9ULL1 1385 aa18.82■□□□□ 0.6
ABCF3-201ENST00000292808 NINLQ9Y2I6 1382 aa18.82■□□□□ 0.6
ABCF3-201ENST00000292808 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
ABCF3-201ENST00000292808 SRPK2P78362 688 aaKnown RBP18.81■□□□□ 0.6
ABCF3-201ENST00000292808 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
ABCF3-201ENST00000292808 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
ABCF3-201ENST00000292808 MED14O60244 1454 aa18.81■□□□□ 0.6
ABCF3-201ENST00000292808 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
ABCF3-201ENST00000292808 CDK19Q9BWU1 502 aa18.8■□□□□ 0.6
ABCF3-201ENST00000292808 ADAMTSL3P82987 1691 aa18.78■□□□□ 0.6
ABCF3-201ENST00000292808 FAM135BQ49AJ0 1406 aa18.78■□□□□ 0.6
ABCF3-201ENST00000292808 ADAMTS8Q9UP79 889 aa18.78■□□□□ 0.6
ABCF3-201ENST00000292808 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
ABCF3-201ENST00000292808 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.59
ABCF3-201ENST00000292808 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
ABCF3-201ENST00000292808 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
ABCF3-201ENST00000292808 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
ABCF3-201ENST00000292808 SIRT1Q96EB6 747 aa18.75■□□□□ 0.59
ABCF3-201ENST00000292808 CEP170BQ9Y4F5 1589 aaPredicted RBP18.75■□□□□ 0.59
ABCF3-201ENST00000292808 ROBO2Q9HCK4 1378 aa18.75■□□□□ 0.59
ABCF3-201ENST00000292808 MORC1Q86VD1 984 aa18.74■□□□□ 0.59
ABCF3-201ENST00000292808 PTPRUQ92729 1446 aa18.74■□□□□ 0.59
ABCF3-201ENST00000292808 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
ABCF3-201ENST00000292808 NSD2O96028 1365 aa18.74■□□□□ 0.59
ABCF3-201ENST00000292808 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
ABCF3-201ENST00000292808 POLR3AO14802 1390 aaPredicted RBP18.73■□□□□ 0.59
ABCF3-201ENST00000292808 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.73■□□□□ 0.59
ABCF3-201ENST00000292808 CABP1Q9NZU7 370 aa18.71■□□□□ 0.59
ABCF3-201ENST00000292808 ADGRB2O60241 1585 aa18.71■□□□□ 0.59
ABCF3-201ENST00000292808 ATP7BP35670 1465 aa18.71■□□□□ 0.59
ABCF3-201ENST00000292808 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.58
ABCF3-201ENST00000292808 WDR43Q15061 677 aaKnown RBP eCLIP18.71■□□□□ 0.58
ABCF3-201ENST00000292808 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
ABCF3-201ENST00000292808 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
ABCF3-201ENST00000292808 SLC26A8Q96RN1 970 aa18.7■□□□□ 0.58
ABCF3-201ENST00000292808 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
ABCF3-201ENST00000292808 ZNF142P52746 1687 aaPredicted RBP18.7■□□□□ 0.58
ABCF3-201ENST00000292808 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
ABCF3-201ENST00000292808 THEMISQ8N1K5 641 aaPredicted RBP18.69■□□□□ 0.58
ABCF3-201ENST00000292808 DIP2AQ14689 1571 aa18.68■□□□□ 0.58
ABCF3-201ENST00000292808 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
ABCF3-201ENST00000292808 FYB1O15117 783 aa18.66■□□□□ 0.58
ABCF3-201ENST00000292808 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
ABCF3-201ENST00000292808 MYT1Q01538 1121 aa18.66■□□□□ 0.58
ABCF3-201ENST00000292808 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
ABCF3-201ENST00000292808 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
ABCF3-201ENST00000292808 CDC42BPGQ6DT37 1551 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 CDCA7LQ96GN5 454 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 GGNBP2Q9H3C7 697 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 TBX22Q9Y458 520 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 PRR36Q9H6K5 1346 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 PDE3BQ13370 1112 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
ABCF3-201ENST00000292808 MON2Q7Z3U7 1717 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 TOPAZ1Q8N9V7 1692 aa18.65■□□□□ 0.58
ABCF3-201ENST00000292808 NCKAP5LQ9HCH0 1330 aa18.64■□□□□ 0.58
ABCF3-201ENST00000292808 MTHFSP49914 203 aa18.64■□□□□ 0.58
ABCF3-201ENST00000292808 AKAP12Q02952 1782 aa18.64■□□□□ 0.57
ABCF3-201ENST00000292808 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
ABCF3-201ENST00000292808 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
ABCF3-201ENST00000292808 ZNF521Q96K83 1311 aa18.63■□□□□ 0.57
ABCF3-201ENST00000292808 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
ABCF3-201ENST00000292808 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
ABCF3-201ENST00000292808 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-201ENST00000292808 B4GALNT3Q6L9W6 998 aa18.62■□□□□ 0.57
ABCF3-201ENST00000292808 ITSN1Q15811 1721 aa18.62■□□□□ 0.57
ABCF3-201ENST00000292808 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
ABCF3-201ENST00000292808 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
ABCF3-201ENST00000292808 SETD1BQ9UPS6 1966 aaKnown RBP18.59■□□□□ 0.57
ABCF3-201ENST00000292808 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
ABCF3-201ENST00000292808 NRKQ7Z2Y5 1582 aa18.57■□□□□ 0.56
ABCF3-201ENST00000292808 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
ABCF3-201ENST00000292808 IQSEC2Q5JU85 1478 aa18.57■□□□□ 0.56
ABCF3-201ENST00000292808 APAF1O14727 1248 aa18.57■□□□□ 0.56
ABCF3-201ENST00000292808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.57■□□□□ 0.56
ABCF3-201ENST00000292808 RCAN3Q9UKA8 241 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms