RNA–Protein interactions for RNA: ENST00000288266.7

APPL1-201, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APPL1, Length 6,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-201ENST00000288266 IFFO2Q5TF58 517 aa18.66■□□□□ 0.58
APPL1-201ENST00000288266 SMC3Q9UQE7 1217 aa18.66■□□□□ 0.58
APPL1-201ENST00000288266 RUFY2Q8WXA3 655 aa18.65■□□□□ 0.58
APPL1-201ENST00000288266 NKTRP30414 1462 aaKnown RBP18.65■□□□□ 0.58
APPL1-201ENST00000288266 LRPPRCP42704 1394 aaKnown RBP18.64■□□□□ 0.58
APPL1-201ENST00000288266 ZKSCAN1P17029 563 aaPredicted RBP18.63■□□□□ 0.57
APPL1-201ENST00000288266 GPS2Q13227 327 aa18.63■□□□□ 0.57
APPL1-201ENST00000288266 SF3A1Q15459 793 aaKnown RBP18.63■□□□□ 0.57
APPL1-201ENST00000288266 A0A0U1RQG5 324 aaPredicted RBP18.63■□□□□ 0.57
APPL1-201ENST00000288266 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
APPL1-201ENST00000288266 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
APPL1-201ENST00000288266 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 CCDC34Q96HJ3 373 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 CCDC66A2RUB6 948 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
APPL1-201ENST00000288266 DUSP27Q5VZP5 1158 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 FAM184AQ8NB25 1140 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 PRDM2Q13029 1718 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 C9orf84Q5VXU9 1444 aa18.62■□□□□ 0.57
APPL1-201ENST00000288266 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
APPL1-201ENST00000288266 WWC1Q8IX03 1113 aa18.61■□□□□ 0.57
APPL1-201ENST00000288266 CHMP4CQ96CF2 233 aa18.61■□□□□ 0.57
APPL1-201ENST00000288266 ZMYND15Q9H091 742 aa18.61■□□□□ 0.57
APPL1-201ENST00000288266 PODXL2Q9NZ53 605 aa18.61■□□□□ 0.57
APPL1-201ENST00000288266 NEK4P51957 841 aa18.61■□□□□ 0.57
APPL1-201ENST00000288266 VPS37CA5D8V6 355 aaPredicted RBP18.6■□□□□ 0.57
APPL1-201ENST00000288266 BICD2Q8TD16 824 aa18.6■□□□□ 0.57
APPL1-201ENST00000288266 CHMP3Q9Y3E7 222 aa18.6■□□□□ 0.57
APPL1-201ENST00000288266 TBC1D32Q96NH3 1257 aa18.59■□□□□ 0.57
APPL1-201ENST00000288266 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
APPL1-201ENST00000288266 ARGLU1Q9NWB6 273 aaPredicted RBP18.59■□□□□ 0.57
APPL1-201ENST00000288266 C8orf34Q49A92 452 aa18.58■□□□□ 0.57
APPL1-201ENST00000288266 TSR2Q969E8 191 aaKnown RBP18.58■□□□□ 0.56
APPL1-201ENST00000288266 PTPRGP23470 1445 aa18.58■□□□□ 0.56
APPL1-201ENST00000288266 XRCC6P12956 609 aaKnown RBP eCLIP18.57■□□□□ 0.56
APPL1-201ENST00000288266 COG3Q96JB2 828 aa18.57■□□□□ 0.56
APPL1-201ENST00000288266 TNPO1Q92973 898 aaKnown RBP18.57■□□□□ 0.56
APPL1-201ENST00000288266 HOMER1Q86YM7 354 aa18.56■□□□□ 0.56
APPL1-201ENST00000288266 RARSP54136 660 aaKnown RBP18.55■□□□□ 0.56
APPL1-201ENST00000288266 TROQ12816 1431 aaPredicted RBP18.55■□□□□ 0.56
APPL1-201ENST00000288266 TPD52L1Q16890 204 aaPredicted RBP18.55■□□□□ 0.56
APPL1-201ENST00000288266 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.55■□□□□ 0.56
APPL1-201ENST00000288266 EPRSP07814 1512 aaKnown RBP18.54■□□□□ 0.56
APPL1-201ENST00000288266 C1orf115Q9H7X2 142 aa18.54■□□□□ 0.56
APPL1-201ENST00000288266 CCAR2Q8N163 923 aaKnown RBP18.53■□□□□ 0.56
APPL1-201ENST00000288266 RNF20Q5VTR2 975 aa18.53■□□□□ 0.56
APPL1-201ENST00000288266 ERC2O15083 957 aa18.53■□□□□ 0.56
APPL1-201ENST00000288266 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
APPL1-201ENST00000288266 TRIM5Q9C035 493 aa18.52■□□□□ 0.56
APPL1-201ENST00000288266 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
APPL1-201ENST00000288266 IGHDP01880 384 aa18.52■□□□□ 0.56
APPL1-201ENST00000288266 MINK1Q8N4C8 1332 aaPredicted RBP18.52■□□□□ 0.56
APPL1-201ENST00000288266 ABCC5O15440 1437 aa18.52■□□□□ 0.56
APPL1-201ENST00000288266 HMGXB3Q12766 1538 aa18.52■□□□□ 0.55
APPL1-201ENST00000288266 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.55
APPL1-201ENST00000288266 MNS1Q8NEH6 495 aa18.51■□□□□ 0.55
APPL1-201ENST00000288266 RNF123Q5XPI4 1314 aa18.51■□□□□ 0.55
APPL1-201ENST00000288266 MCM5P33992 734 aa18.51■□□□□ 0.55
APPL1-201ENST00000288266 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
APPL1-201ENST00000288266 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
APPL1-201ENST00000288266 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
APPL1-201ENST00000288266 CCDC73Q6ZRK6 1079 aa18.49■□□□□ 0.55
APPL1-201ENST00000288266 SYCE3A1L190 88 aa18.49■□□□□ 0.55
APPL1-201ENST00000288266 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
APPL1-201ENST00000288266 CCDC192P0DO97 292 aa18.49■□□□□ 0.55
APPL1-201ENST00000288266 AMPHP49418 695 aa18.49■□□□□ 0.55
APPL1-201ENST00000288266 ZNF428Q96B54 188 aa18.49■□□□□ 0.55
APPL1-201ENST00000288266 HMOX1P09601 288 aa18.49■□□□□ 0.55
APPL1-201ENST00000288266 XPCQ01831 940 aaPredicted RBP18.49■□□□□ 0.55
APPL1-201ENST00000288266 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
APPL1-201ENST00000288266 PTPRKQ15262 1439 aa18.48■□□□□ 0.55
APPL1-201ENST00000288266 TAF3Q5VWG9 929 aa18.48■□□□□ 0.55
APPL1-201ENST00000288266 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
APPL1-201ENST00000288266 FIBPO43427 364 aa18.48■□□□□ 0.55
APPL1-201ENST00000288266 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
APPL1-201ENST00000288266 TWISTNBQ3B726 338 aaPredicted RBP18.48■□□□□ 0.55
APPL1-201ENST00000288266 PDCL2Q8N4E4 241 aa18.48■□□□□ 0.55
APPL1-201ENST00000288266 PANK2Q9BZ23 570 aa18.48■□□□□ 0.55
APPL1-201ENST00000288266 IFIT2P09913 472 aaKnown RBP18.47■□□□□ 0.55
APPL1-201ENST00000288266 CCDC112Q8NEF3 446 aa18.47■□□□□ 0.55
APPL1-201ENST00000288266 SSFA2P28290 1259 aa18.47■□□□□ 0.55
APPL1-201ENST00000288266 SPC24Q8NBT2 197 aa18.47■□□□□ 0.55
APPL1-201ENST00000288266 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
APPL1-201ENST00000288266 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
APPL1-201ENST00000288266 TMEM57Q8N5G2 664 aa18.47■□□□□ 0.55
APPL1-201ENST00000288266 NAT10Q9H0A0 1025 aaKnown RBP18.47■□□□□ 0.55
APPL1-201ENST00000288266 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
APPL1-201ENST00000288266 KLHL40Q2TBA0 621 aa18.46■□□□□ 0.55
APPL1-201ENST00000288266 DYNC1I1O14576 645 aa18.46■□□□□ 0.55
APPL1-201ENST00000288266 GPRASP1Q5JY77 1395 aa18.46■□□□□ 0.54
APPL1-201ENST00000288266 MPNDQ8N594 471 aa18.45■□□□□ 0.54
APPL1-201ENST00000288266 DHX29Q7Z478 1369 aaKnown RBP18.45■□□□□ 0.54
APPL1-201ENST00000288266 PDCP20941 246 aa18.45■□□□□ 0.54
APPL1-201ENST00000288266 GORABQ5T7V8 394 aa18.45■□□□□ 0.54
APPL1-201ENST00000288266 CWC15Q9P013 229 aaKnown RBP18.45■□□□□ 0.54
APPL1-201ENST00000288266 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
APPL1-201ENST00000288266 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
APPL1-201ENST00000288266 SLC12A5Q9H2X9 1139 aa18.44■□□□□ 0.54
APPL1-201ENST00000288266 TPM1P09493 284 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms