RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
SEC24D-201ENST00000280551 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.92□□□□□ -0.18
SEC24D-201ENST00000280551 ITSN1Q15811 1721 aa13.91□□□□□ -0.18
SEC24D-201ENST00000280551 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
SEC24D-201ENST00000280551 NALCNQ8IZF0 1738 aa13.91□□□□□ -0.18
SEC24D-201ENST00000280551 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
SEC24D-201ENST00000280551 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
SEC24D-201ENST00000280551 NSD2O96028 1365 aa13.9□□□□□ -0.18
SEC24D-201ENST00000280551 ATP7BP35670 1465 aa13.9□□□□□ -0.18
SEC24D-201ENST00000280551 PANK3Q9H999 370 aa13.89□□□□□ -0.19
SEC24D-201ENST00000280551 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
SEC24D-201ENST00000280551 SMG6Q86US8 1419 aaKnown RBP13.89□□□□□ -0.19
SEC24D-201ENST00000280551 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
SEC24D-201ENST00000280551 PTCH1Q13635 1447 aa13.87□□□□□ -0.19
SEC24D-201ENST00000280551 LRRC7Q96NW7 1537 aa13.86□□□□□ -0.19
SEC24D-201ENST00000280551 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
SEC24D-201ENST00000280551 RNF123Q5XPI4 1314 aa13.85□□□□□ -0.19
SEC24D-201ENST00000280551 COL3A1P02461 1466 aaPredicted RBP13.85□□□□□ -0.19
SEC24D-201ENST00000280551 CARD14Q9BXL6 1004 aa13.85□□□□□ -0.19
SEC24D-201ENST00000280551 NWD1Q149M9 1564 aa13.84□□□□□ -0.19
SEC24D-201ENST00000280551 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
SEC24D-201ENST00000280551 MRS2Q9HD23 443 aa13.84□□□□□ -0.19
SEC24D-201ENST00000280551 SETD1BQ9UPS6 1966 aaKnown RBP13.84□□□□□ -0.19
SEC24D-201ENST00000280551 DNAJC5Q9H3Z4 198 aa13.84□□□□□ -0.19
SEC24D-201ENST00000280551 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
SEC24D-201ENST00000280551 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.19
SEC24D-201ENST00000280551 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
SEC24D-201ENST00000280551 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
SEC24D-201ENST00000280551 IQSEC2Q5JU85 1478 aa13.82□□□□□ -0.2
SEC24D-201ENST00000280551 METP08581 1390 aa13.81□□□□□ -0.2
SEC24D-201ENST00000280551 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
SEC24D-201ENST00000280551 MSH5O43196 834 aa13.81□□□□□ -0.2
SEC24D-201ENST00000280551 PIK3R4Q99570 1358 aa13.8□□□□□ -0.2
SEC24D-201ENST00000280551 PTPRUQ92729 1446 aa13.79□□□□□ -0.2
SEC24D-201ENST00000280551 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
SEC24D-201ENST00000280551 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
SEC24D-201ENST00000280551 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
SEC24D-201ENST00000280551 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
SEC24D-201ENST00000280551 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.21
SEC24D-201ENST00000280551 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
SEC24D-201ENST00000280551 ZNF521Q96K83 1311 aa13.76□□□□□ -0.21
SEC24D-201ENST00000280551 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
SEC24D-201ENST00000280551 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
SEC24D-201ENST00000280551 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
SEC24D-201ENST00000280551 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
SEC24D-201ENST00000280551 MAP2P11137 1827 aaKnown RBP13.75□□□□□ -0.21
SEC24D-201ENST00000280551 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
SEC24D-201ENST00000280551 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
SEC24D-201ENST00000280551 PNPLA6Q8IY17 1366 aa13.74□□□□□ -0.21
SEC24D-201ENST00000280551 PLEKHH1Q9ULM0 1364 aa13.74□□□□□ -0.21
SEC24D-201ENST00000280551 HNRNPUQ00839 825 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEC24D-201ENST00000280551 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
SEC24D-201ENST00000280551 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
SEC24D-201ENST00000280551 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
SEC24D-201ENST00000280551 PDE3BQ13370 1112 aa13.72□□□□□ -0.21
SEC24D-201ENST00000280551 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
SEC24D-201ENST00000280551 EDC4Q6P2E9 1401 aaKnown RBP13.71□□□□□ -0.21
SEC24D-201ENST00000280551 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
SEC24D-201ENST00000280551 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
SEC24D-201ENST00000280551 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
SEC24D-201ENST00000280551 LTKP29376 864 aa13.7□□□□□ -0.22
SEC24D-201ENST00000280551 NKTRP30414 1462 aaKnown RBP13.69□□□□□ -0.22
SEC24D-201ENST00000280551 NGEFQ8N5V2 710 aa13.69□□□□□ -0.22
SEC24D-201ENST00000280551 ANKARQ7Z5J8 1434 aa13.69□□□□□ -0.22
SEC24D-201ENST00000280551 PIK3C2AO00443 1686 aa13.68□□□□□ -0.22
SEC24D-201ENST00000280551 FAM9BQ8IZU0 186 aa13.68□□□□□ -0.22
SEC24D-201ENST00000280551 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
SEC24D-201ENST00000280551 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
SEC24D-201ENST00000280551 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
SEC24D-201ENST00000280551 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
SEC24D-201ENST00000280551 AATKQ6ZMQ8 1374 aa13.67□□□□□ -0.22
SEC24D-201ENST00000280551 TRMT2AQ8IZ69 625 aaKnown RBP13.67□□□□□ -0.22
SEC24D-201ENST00000280551 NUTM2DQ5VT03 806 aaPredicted RBP13.67□□□□□ -0.22
SEC24D-201ENST00000280551 MLECQ14165 292 aa13.66□□□□□ -0.22
SEC24D-201ENST00000280551 CDK12Q9NYV4 1490 aaPredicted RBP13.66□□□□□ -0.22
SEC24D-201ENST00000280551 PEAK1Q9H792 1746 aa13.66□□□□□ -0.22
SEC24D-201ENST00000280551 POLR3GLQ9BT43 218 aa13.66□□□□□ -0.22
SEC24D-201ENST00000280551 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
SEC24D-201ENST00000280551 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
SEC24D-201ENST00000280551 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
SEC24D-201ENST00000280551 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
SEC24D-201ENST00000280551 STRCP1A6NGW2 1772 aa13.64□□□□□ -0.23
SEC24D-201ENST00000280551 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
SEC24D-201ENST00000280551 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
SEC24D-201ENST00000280551 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
SEC24D-201ENST00000280551 MST1RQ04912 1400 aa13.63□□□□□ -0.23
SEC24D-201ENST00000280551 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
SEC24D-201ENST00000280551 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
SEC24D-201ENST00000280551 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
SEC24D-201ENST00000280551 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
SEC24D-201ENST00000280551 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
SEC24D-201ENST00000280551 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
SEC24D-201ENST00000280551 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
SEC24D-201ENST00000280551 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
SEC24D-201ENST00000280551 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
SEC24D-201ENST00000280551 USP31Q70CQ4 1352 aa13.61□□□□□ -0.23
SEC24D-201ENST00000280551 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
SEC24D-201ENST00000280551 PRR36Q9H6K5 1346 aa13.6□□□□□ -0.23
SEC24D-201ENST00000280551 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
SEC24D-201ENST00000280551 FYB1O15117 783 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms