RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 MS4A1P11836 297 aa15.17■□□□□ 0.02
SLC13A3-201ENST00000279027 ASXL1Q8IXJ9 1541 aa15.16■□□□□ 0.02
SLC13A3-201ENST00000279027 APBB1O00213 710 aa15.15■□□□□ 0.02
SLC13A3-201ENST00000279027 THUMPD2Q9BTF0 503 aaKnown RBP15.15■□□□□ 0.02
SLC13A3-201ENST00000279027 SLC52A1Q9NWF4 448 aa15.14■□□□□ 0.01
SLC13A3-201ENST00000279027 IGHDP01880 384 aa15.14■□□□□ 0.01
SLC13A3-201ENST00000279027 EIF2AK4Q9P2K8 1649 aaKnown RBP15.13■□□□□ 0.01
SLC13A3-201ENST00000279027 ZNF518AQ6AHZ1 1483 aa15.13■□□□□ 0.01
SLC13A3-201ENST00000279027 TRPM1Q7Z4N2 1603 aa15.13■□□□□ 0.01
SLC13A3-201ENST00000279027 ZKSCAN2Q63HK3 967 aa15.13■□□□□ 0.01
SLC13A3-201ENST00000279027 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
SLC13A3-201ENST00000279027 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
SLC13A3-201ENST00000279027 PRKAR2BP31323 418 aa15.12■□□□□ 0.01
SLC13A3-201ENST00000279027 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
SLC13A3-201ENST00000279027 MFAP1P55081 439 aaKnown RBP15.11■□□□□ 0.01
SLC13A3-201ENST00000279027 RRS1Q15050 365 aaKnown RBP15.11■□□□□ 0.01
SLC13A3-201ENST00000279027 DZIP1LQ8IYY4 767 aaKnown RBP15.11■□□□□ 0.01
SLC13A3-201ENST00000279027 NPATQ14207 1427 aa15.1■□□□□ 0.01
SLC13A3-201ENST00000279027 PRDM15P57071 1507 aaPredicted RBP15.1■□□□□ 0.01
SLC13A3-201ENST00000279027 RARSP54136 660 aaKnown RBP15.1■□□□□ 0.01
SLC13A3-201ENST00000279027 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
SLC13A3-201ENST00000279027 NCKAP5LQ9HCH0 1330 aa15.1■□□□□ 0.01
SLC13A3-201ENST00000279027 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
SLC13A3-201ENST00000279027 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
SLC13A3-201ENST00000279027 IQGAP3Q86VI3 1631 aa15.09■□□□□ 0.01
SLC13A3-201ENST00000279027 ZFYVE16Q7Z3T8 1539 aa15.09■□□□□ 0.01
SLC13A3-201ENST00000279027 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0.01
SLC13A3-201ENST00000279027 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0.01
SLC13A3-201ENST00000279027 SLC26A8Q96RN1 970 aa15.08■□□□□ 0
SLC13A3-201ENST00000279027 TMPOP42166 694 aaKnown RBP15.08■□□□□ 0
SLC13A3-201ENST00000279027 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
SLC13A3-201ENST00000279027 UNC13BO14795 1591 aa15.08■□□□□ 0
SLC13A3-201ENST00000279027 BECN1Q14457 450 aa15.08■□□□□ 0
SLC13A3-201ENST00000279027 COG3Q96JB2 828 aa15.08■□□□□ 0
SLC13A3-201ENST00000279027 NKTRP30414 1462 aaKnown RBP15.07■□□□□ 0
SLC13A3-201ENST00000279027 RLBP1P12271 317 aa15.07■□□□□ 0
SLC13A3-201ENST00000279027 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
SLC13A3-201ENST00000279027 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
SLC13A3-201ENST00000279027 PDZRN3Q9UPQ7 1066 aa15.07■□□□□ 0
SLC13A3-201ENST00000279027 EMILIN1Q9Y6C2 1016 aa15.07■□□□□ 0
SLC13A3-201ENST00000279027 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
SLC13A3-201ENST00000279027 FYB1O15117 783 aa15.07■□□□□ 0
SLC13A3-201ENST00000279027 NME9Q86XW9 330 aa15.07■□□□□ 0
SLC13A3-201ENST00000279027 C1orf115Q9H7X2 142 aa15.07■□□□□ 0
SLC13A3-201ENST00000279027 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
SLC13A3-201ENST00000279027 CLTCL1P53675 1640 aa15.06■□□□□ 0
SLC13A3-201ENST00000279027 PTPRTO14522 1441 aa15.06■□□□□ 0
SLC13A3-201ENST00000279027 PLXNC1O60486 1568 aa15.06■□□□□ 0
SLC13A3-201ENST00000279027 CEBPAP49715 358 aaPredicted RBP15.06■□□□□ 0
SLC13A3-201ENST00000279027 PDE3AQ14432 1141 aa15.06■□□□□ 0
SLC13A3-201ENST00000279027 ERVK-7P63135 1459 aa15.05■□□□□ 0
SLC13A3-201ENST00000279027 IPO8O15397 1037 aaKnown RBP15.05■□□□□ -0
SLC13A3-201ENST00000279027 DCTN1Q14203 1278 aa15.05■□□□□ -0
SLC13A3-201ENST00000279027 TRPM2O94759 1503 aa15.05■□□□□ -0
SLC13A3-201ENST00000279027 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
SLC13A3-201ENST00000279027 YEATS2Q9ULM3 1422 aa15.04■□□□□ -0
SLC13A3-201ENST00000279027 NGDNQ8NEJ9 315 aaKnown RBP15.04■□□□□ -0
SLC13A3-201ENST00000279027 SSH1Q8WYL5 1049 aa15.04■□□□□ -0
SLC13A3-201ENST00000279027 LNPKQ9C0E8 428 aa15.04■□□□□ -0
SLC13A3-201ENST00000279027 WDR63Q8IWG1 891 aa15.04■□□□□ -0
SLC13A3-201ENST00000279027 PIK3C2GO75747 1445 aa15.04■□□□□ -0
SLC13A3-201ENST00000279027 E9PCH4 1651 aa15.03■□□□□ -0
SLC13A3-201ENST00000279027 NGEFQ8N5V2 710 aa15.03■□□□□ -0
SLC13A3-201ENST00000279027 PCDHB15Q9Y5E8 787 aa15.03■□□□□ -0
SLC13A3-201ENST00000279027 ZMYM4Q5VZL5 1548 aa15.02■□□□□ -0
SLC13A3-201ENST00000279027 NECTIN2Q92692 538 aa15.01□□□□□ -0.01
SLC13A3-201ENST00000279027 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
SLC13A3-201ENST00000279027 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
SLC13A3-201ENST00000279027 A0A1W2PP64 1363 aa15.01□□□□□ -0.01
SLC13A3-201ENST00000279027 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
SLC13A3-201ENST00000279027 SLC4A10Q6U841 1118 aa15.01□□□□□ -0.01
SLC13A3-201ENST00000279027 NUDT16Q96DE0 195 aaKnown RBP15□□□□□ -0.01
SLC13A3-201ENST00000279027 CLASP1Q7Z460 1538 aa15□□□□□ -0.01
SLC13A3-201ENST00000279027 POLR3AO14802 1390 aaPredicted RBP15□□□□□ -0.01
SLC13A3-201ENST00000279027 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 ZNF521Q96K83 1311 aa14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 TMEM57Q8N5G2 664 aa14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 RBM33Q96EV2 1170 aaKnown RBP14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 FAM83GA6ND36 823 aa14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 NFKBIBQ15653 356 aa14.99□□□□□ -0.01
SLC13A3-201ENST00000279027 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
SLC13A3-201ENST00000279027 DDX19BQ9UMR2 479 aa14.98□□□□□ -0.01
SLC13A3-201ENST00000279027 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
SLC13A3-201ENST00000279027 AMPHP49418 695 aa14.98□□□□□ -0.01
SLC13A3-201ENST00000279027 GZF1Q9H116 711 aaPredicted RBP14.98□□□□□ -0.01
SLC13A3-201ENST00000279027 SEC24BO95487 1268 aa14.97□□□□□ -0.01
SLC13A3-201ENST00000279027 TRIM27P14373 513 aa14.97□□□□□ -0.01
SLC13A3-201ENST00000279027 C8orf34Q49A92 452 aa14.97□□□□□ -0.01
SLC13A3-201ENST00000279027 SULT6B1Q6IMI4 303 aa14.97□□□□□ -0.01
SLC13A3-201ENST00000279027 ATF7IPQ6VMQ6 1270 aa14.97□□□□□ -0.01
SLC13A3-201ENST00000279027 MADDQ8WXG6 1647 aa14.96□□□□□ -0.01
SLC13A3-201ENST00000279027 RTF1Q92541 710 aaKnown RBP14.96□□□□□ -0.01
SLC13A3-201ENST00000279027 EID1Q9Y6B2 187 aa14.96□□□□□ -0.01
SLC13A3-201ENST00000279027 FRAT2O75474 233 aaPredicted RBP14.96□□□□□ -0.01
SLC13A3-201ENST00000279027 MIS18AQ9NYP9 233 aa14.96□□□□□ -0.01
SLC13A3-201ENST00000279027 PHACTR3Q96KR7 559 aa14.96□□□□□ -0.01
SLC13A3-201ENST00000279027 KDM2BQ8NHM5 1336 aa14.96□□□□□ -0.02
SLC13A3-201ENST00000279027 NPC1L1Q9UHC9 1359 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms