RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 PLPPR3Q6T4P5 718 aa29.93■■■□□ 2.38
CCDC7-201ENST00000277657 CARD14Q9BXL6 1004 aa29.93■■■□□ 2.38
CCDC7-201ENST00000277657 GTF3C3Q9Y5Q9 886 aa29.92■■■□□ 2.38
CCDC7-201ENST00000277657 TECPR2O15040 1411 aa29.92■■■□□ 2.38
CCDC7-201ENST00000277657 TXNDC2Q86VQ3 553 aa29.9■■■□□ 2.38
CCDC7-201ENST00000277657 THEMISQ8N1K5 641 aaPredicted RBP29.9■■■□□ 2.38
CCDC7-201ENST00000277657 SLC12A5Q9H2X9 1139 aa29.9■■■□□ 2.38
CCDC7-201ENST00000277657 MED14O60244 1454 aa29.89■■■□□ 2.38
CCDC7-201ENST00000277657 EID1Q9Y6B2 187 aa29.89■■■□□ 2.37
CCDC7-201ENST00000277657 MINK1Q8N4C8 1332 aaPredicted RBP29.88■■■□□ 2.37
CCDC7-201ENST00000277657 CEP170BQ9Y4F5 1589 aaPredicted RBP29.88■■■□□ 2.37
CCDC7-201ENST00000277657 SIRT1Q96EB6 747 aa29.88■■■□□ 2.37
CCDC7-201ENST00000277657 NINLQ9Y2I6 1382 aa29.88■■■□□ 2.37
CCDC7-201ENST00000277657 CABP2Q9NPB3 220 aa29.87■■■□□ 2.37
CCDC7-201ENST00000277657 FAM135BQ49AJ0 1406 aa29.87■■■□□ 2.37
CCDC7-201ENST00000277657 CPS1P31327 1500 aa29.86■■■□□ 2.37
CCDC7-201ENST00000277657 BCANQ96GW7 911 aa29.85■■■□□ 2.37
CCDC7-201ENST00000277657 PLEKHH1Q9ULM0 1364 aa29.85■■■□□ 2.37
CCDC7-201ENST00000277657 USP32Q8NFA0 1604 aa29.85■■■□□ 2.37
CCDC7-201ENST00000277657 ATAD2Q6PL18 1390 aa29.84■■■□□ 2.37
CCDC7-201ENST00000277657 WAPLQ7Z5K2 1190 aa29.84■■■□□ 2.37
CCDC7-201ENST00000277657 ANKRD36BQ8N2N9 1353 aa29.83■■■□□ 2.37
CCDC7-201ENST00000277657 SRPK2P78362 688 aaKnown RBP29.82■■■□□ 2.37
CCDC7-201ENST00000277657 NSD3Q9BZ95 1437 aa29.82■■■□□ 2.37
CCDC7-201ENST00000277657 ZNF142P52746 1687 aaPredicted RBP29.81■■■□□ 2.36
CCDC7-201ENST00000277657 PPP2R1AP30153 589 aa29.8■■■□□ 2.36
CCDC7-201ENST00000277657 CDK19Q9BWU1 502 aa29.79■■■□□ 2.36
CCDC7-201ENST00000277657 ZBED9Q6R2W3 1325 aa29.79■■■□□ 2.36
CCDC7-201ENST00000277657 DIP2AQ14689 1571 aa29.78■■■□□ 2.36
CCDC7-201ENST00000277657 SETD1BQ9UPS6 1966 aaKnown RBP29.77■■■□□ 2.36
CCDC7-201ENST00000277657 TBX22Q9Y458 520 aa29.76■■■□□ 2.35
CCDC7-201ENST00000277657 ROBO2Q9HCK4 1378 aa29.73■■■□□ 2.35
CCDC7-201ENST00000277657 CD163L1Q9NR16 1453 aa29.72■■■□□ 2.35
CCDC7-201ENST00000277657 INSRP06213 1382 aa29.72■■■□□ 2.35
CCDC7-201ENST00000277657 SLC26A8Q96RN1 970 aa29.72■■■□□ 2.35
CCDC7-201ENST00000277657 PTPRUQ92729 1446 aa29.72■■■□□ 2.35
CCDC7-201ENST00000277657 A0A1W2PP64 1363 aa29.72■■■□□ 2.35
CCDC7-201ENST00000277657 CGNL1Q0VF96 1302 aa29.71■■■□□ 2.35
CCDC7-201ENST00000277657 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
CCDC7-201ENST00000277657 NSD2O96028 1365 aa29.69■■■□□ 2.34
CCDC7-201ENST00000277657 TERF2IPQ9NYB0 399 aa29.68■■■□□ 2.34
CCDC7-201ENST00000277657 ADGRB2O60241 1585 aa29.67■■■□□ 2.34
CCDC7-201ENST00000277657 ATP7BP35670 1465 aa29.64■■■□□ 2.34
CCDC7-201ENST00000277657 PTCH1Q13635 1447 aa29.64■■■□□ 2.34
CCDC7-201ENST00000277657 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.64■■■□□ 2.34
CCDC7-201ENST00000277657 CABP1Q9NZU7 370 aa29.63■■■□□ 2.33
CCDC7-201ENST00000277657 MORC1Q86VD1 984 aa29.62■■■□□ 2.33
CCDC7-201ENST00000277657 XRN1Q8IZH2 1706 aaKnown RBP29.62■■■□□ 2.33
CCDC7-201ENST00000277657 BLMP54132 1417 aaPredicted RBP29.62■■■□□ 2.33
CCDC7-201ENST00000277657 AMOTL2Q9Y2J4 779 aa29.61■■■□□ 2.33
CCDC7-201ENST00000277657 PIK3R4Q99570 1358 aa29.61■■■□□ 2.33
CCDC7-201ENST00000277657 ANKLE2Q86XL3 938 aa29.61■■■□□ 2.33
CCDC7-201ENST00000277657 HDGFL2Q7Z4V5 671 aaPredicted RBP29.6■■■□□ 2.33
CCDC7-201ENST00000277657 NUDT16Q96DE0 195 aaKnown RBP29.56■■■□□ 2.32
CCDC7-201ENST00000277657 ANKRD26Q9UPS8 1709 aa29.56■■■□□ 2.32
CCDC7-201ENST00000277657 PPIP5K1Q6PFW1 1433 aa29.56■■■□□ 2.32
CCDC7-201ENST00000277657 POLR3AO14802 1390 aaPredicted RBP29.55■■■□□ 2.32
CCDC7-201ENST00000277657 CPSF1Q10570 1443 aaKnown RBP29.55■■■□□ 2.32
CCDC7-201ENST00000277657 ADAMTS8Q9UP79 889 aa29.53■■■□□ 2.32
CCDC7-201ENST00000277657 CCDC61Q9Y6R9 512 aa29.53■■■□□ 2.32
CCDC7-201ENST00000277657 CDC42BPGQ6DT37 1551 aa29.52■■■□□ 2.32
CCDC7-201ENST00000277657 WDR43Q15061 677 aaKnown RBP eCLIP29.52■■■□□ 2.32
CCDC7-201ENST00000277657 FYB1O15117 783 aa29.51■■■□□ 2.31
CCDC7-201ENST00000277657 KIF20BQ96Q89 1820 aa29.51■■■□□ 2.31
CCDC7-201ENST00000277657 PRR36Q9H6K5 1346 aa29.5■■■□□ 2.31
CCDC7-201ENST00000277657 TOPAZ1Q8N9V7 1692 aa29.49■■■□□ 2.31
CCDC7-201ENST00000277657 CHD2O14647 1828 aaKnown RBP29.48■■■□□ 2.31
CCDC7-201ENST00000277657 SMG6Q86US8 1419 aaKnown RBP29.47■■■□□ 2.31
CCDC7-201ENST00000277657 TNNT2P45379 298 aaPredicted RBP29.47■■■□□ 2.31
CCDC7-201ENST00000277657 EDC4Q6P2E9 1401 aaKnown RBP29.47■■■□□ 2.31
CCDC7-201ENST00000277657 AKAP12Q02952 1782 aa29.46■■■□□ 2.31
CCDC7-201ENST00000277657 MON2Q7Z3U7 1717 aa29.46■■■□□ 2.31
CCDC7-201ENST00000277657 KCNA6P17658 529 aa29.46■■■□□ 2.31
CCDC7-201ENST00000277657 GGNBP2Q9H3C7 697 aa29.46■■■□□ 2.31
CCDC7-201ENST00000277657 NCKAP5LQ9HCH0 1330 aa29.45■■■□□ 2.3
CCDC7-201ENST00000277657 ITSN1Q15811 1721 aa29.44■■■□□ 2.3
CCDC7-201ENST00000277657 NPHP4O75161 1426 aaPredicted RBP29.44■■■□□ 2.3
CCDC7-201ENST00000277657 SHPRHQ149N8 1683 aa29.43■■■□□ 2.3
CCDC7-201ENST00000277657 SENP3-EIF4A1A0A087X0R7 540 aa29.43■■■□□ 2.3
CCDC7-201ENST00000277657 MTHFSP49914 203 aa29.42■■■□□ 2.3
CCDC7-201ENST00000277657 AEBP2Q6ZN18 517 aaPredicted RBP29.42■■■□□ 2.3
CCDC7-201ENST00000277657 PLEKHG3A1L390 1219 aa29.4■■■□□ 2.3
CCDC7-201ENST00000277657 ZNF692Q9BU19 519 aaPredicted RBP29.4■■■□□ 2.3
CCDC7-201ENST00000277657 NUDCQ9Y266 331 aa29.4■■■□□ 2.3
CCDC7-201ENST00000277657 SUPT16HQ9Y5B9 1047 aaKnown RBP29.38■■■□□ 2.29
CCDC7-201ENST00000277657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.37■■■□□ 2.29
CCDC7-201ENST00000277657 CFAP53Q96M91 514 aa29.37■■■□□ 2.29
CCDC7-201ENST00000277657 PDE3BQ13370 1112 aa29.36■■■□□ 2.29
CCDC7-201ENST00000277657 NKTRP30414 1462 aaKnown RBP29.35■■■□□ 2.29
CCDC7-201ENST00000277657 NRKQ7Z2Y5 1582 aa29.34■■■□□ 2.29
CCDC7-201ENST00000277657 NEFLP07196 543 aa29.33■■■□□ 2.29
CCDC7-201ENST00000277657 SALL2Q9Y467 1007 aaPredicted RBP29.32■■■□□ 2.28
CCDC7-201ENST00000277657 ANKARQ7Z5J8 1434 aa29.32■■■□□ 2.28
CCDC7-201ENST00000277657 ACEP12821 1306 aa29.31■■■□□ 2.28
CCDC7-201ENST00000277657 FMN2Q9NZ56 1722 aa29.31■■■□□ 2.28
CCDC7-201ENST00000277657 NUTM2FA1L443 756 aa29.31■■■□□ 2.28
CCDC7-201ENST00000277657 COL3A1P02461 1466 aaPredicted RBP29.3■■■□□ 2.28
CCDC7-201ENST00000277657 FKBP8Q14318 412 aa29.3■■■□□ 2.28
CCDC7-201ENST00000277657 NALCNQ8IZF0 1738 aa29.3■■■□□ 2.28
CCDC7-201ENST00000277657 NME9Q86XW9 330 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms