RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 MYOM1P52179 1685 aa18.2■□□□□ 0.5
MBD1-201ENST00000269468 MTHFSP49914 203 aa18.2■□□□□ 0.5
MBD1-201ENST00000269468 ZKSCAN2Q63HK3 967 aa18.2■□□□□ 0.5
MBD1-201ENST00000269468 ESPNB1AK53 854 aa18.19■□□□□ 0.5
MBD1-201ENST00000269468 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
MBD1-201ENST00000269468 ATP10AO60312 1499 aa18.19■□□□□ 0.5
MBD1-201ENST00000269468 MAST1Q9Y2H9 1570 aa18.19■□□□□ 0.5
MBD1-201ENST00000269468 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
MBD1-201ENST00000269468 ERBB4Q15303 1308 aa18.18■□□□□ 0.5
MBD1-201ENST00000269468 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
MBD1-201ENST00000269468 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
MBD1-201ENST00000269468 DDX11L8A8MPP1 907 aa18.18■□□□□ 0.5
MBD1-201ENST00000269468 AAMPQ13685 434 aa18.18■□□□□ 0.5
MBD1-201ENST00000269468 POLR3AO14802 1390 aaPredicted RBP18.17■□□□□ 0.5
MBD1-201ENST00000269468 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
MBD1-201ENST00000269468 DUOX2Q9NRD8 1548 aa18.17■□□□□ 0.5
MBD1-201ENST00000269468 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
MBD1-201ENST00000269468 KDM5AP29375 1690 aaKnown RBP18.17■□□□□ 0.5
MBD1-201ENST00000269468 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
MBD1-201ENST00000269468 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
MBD1-201ENST00000269468 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
MBD1-201ENST00000269468 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
MBD1-201ENST00000269468 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
MBD1-201ENST00000269468 NSD3Q9BZ95 1437 aa18.16■□□□□ 0.5
MBD1-201ENST00000269468 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
MBD1-201ENST00000269468 ZMYND15Q9H091 742 aa18.15■□□□□ 0.5
MBD1-201ENST00000269468 ERVK-7P63135 1459 aa18.15■□□□□ 0.5
MBD1-201ENST00000269468 GAS2L3Q86XJ1 694 aa18.15■□□□□ 0.5
MBD1-201ENST00000269468 TNPO1Q92973 898 aaKnown RBP18.15■□□□□ 0.5
MBD1-201ENST00000269468 PLXNC1O60486 1568 aa18.14■□□□□ 0.49
MBD1-201ENST00000269468 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.49
MBD1-201ENST00000269468 LNPKQ9C0E8 428 aa18.14■□□□□ 0.49
MBD1-201ENST00000269468 SCAPERQ9BY12 1400 aa18.14■□□□□ 0.49
MBD1-201ENST00000269468 CFAP53Q96M91 514 aa18.13■□□□□ 0.49
MBD1-201ENST00000269468 TRIM27P14373 513 aa18.13■□□□□ 0.49
MBD1-201ENST00000269468 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
MBD1-201ENST00000269468 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
MBD1-201ENST00000269468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.12■□□□□ 0.49
MBD1-201ENST00000269468 RRP9O43818 475 aaKnown RBP18.12■□□□□ 0.49
MBD1-201ENST00000269468 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
MBD1-201ENST00000269468 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
MBD1-201ENST00000269468 EFCAB2Q5VUJ9 269 aa18.11■□□□□ 0.49
MBD1-201ENST00000269468 CEP152O94986 1710 aa18.11■□□□□ 0.49
MBD1-201ENST00000269468 SSH1Q8WYL5 1049 aa18.1■□□□□ 0.49
MBD1-201ENST00000269468 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
MBD1-201ENST00000269468 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
MBD1-201ENST00000269468 NOB1Q9ULX3 412 aaKnown RBP18.1■□□□□ 0.49
MBD1-201ENST00000269468 ZMYM3Q14202 1370 aa18.09■□□□□ 0.49
MBD1-201ENST00000269468 GBP4Q96PP9 640 aa18.09■□□□□ 0.49
MBD1-201ENST00000269468 TRAPPC8Q9Y2L5 1435 aa18.09■□□□□ 0.49
MBD1-201ENST00000269468 KIF3BO15066 747 aa18.09■□□□□ 0.49
MBD1-201ENST00000269468 DDX19BQ9UMR2 479 aa18.09■□□□□ 0.49
MBD1-201ENST00000269468 TMEM57Q8N5G2 664 aa18.08■□□□□ 0.49
MBD1-201ENST00000269468 STAC3Q96MF2 364 aa18.08■□□□□ 0.49
MBD1-201ENST00000269468 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.48
MBD1-201ENST00000269468 CLTCL1P53675 1640 aa18.08■□□□□ 0.48
MBD1-201ENST00000269468 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
MBD1-201ENST00000269468 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
MBD1-201ENST00000269468 ATF7IPQ6VMQ6 1270 aa18.06■□□□□ 0.48
MBD1-201ENST00000269468 HDAC1Q13547 482 aaPredicted RBP18.06■□□□□ 0.48
MBD1-201ENST00000269468 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
MBD1-201ENST00000269468 CD2BP2O95400 341 aaKnown RBP18.05■□□□□ 0.48
MBD1-201ENST00000269468 TRPM2O94759 1503 aa18.05■□□□□ 0.48
MBD1-201ENST00000269468 UGGT1Q9NYU2 1555 aa18.04■□□□□ 0.48
MBD1-201ENST00000269468 CCDC27Q2M243 656 aa18.04■□□□□ 0.48
MBD1-201ENST00000269468 SMC5Q8IY18 1101 aa18.04■□□□□ 0.48
MBD1-201ENST00000269468 IQSEC2Q5JU85 1478 aa18.03■□□□□ 0.48
MBD1-201ENST00000269468 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
MBD1-201ENST00000269468 SSFA2P28290 1259 aa18.03■□□□□ 0.48
MBD1-201ENST00000269468 NCLP19338 710 aaKnown RBP18.03■□□□□ 0.48
MBD1-201ENST00000269468 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
MBD1-201ENST00000269468 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
MBD1-201ENST00000269468 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
MBD1-201ENST00000269468 PTPRTO14522 1441 aa18.02■□□□□ 0.48
MBD1-201ENST00000269468 DDIT3P35638 169 aa18.02■□□□□ 0.48
MBD1-201ENST00000269468 RAB3GAP1Q15042 981 aa18.02■□□□□ 0.48
MBD1-201ENST00000269468 KIAA1211Q6ZU35 1233 aa18.02■□□□□ 0.47
MBD1-201ENST00000269468 C1orf115Q9H7X2 142 aa18.02■□□□□ 0.47
MBD1-201ENST00000269468 ISY1Q9ULR0 285 aaKnown RBP18.02■□□□□ 0.47
MBD1-201ENST00000269468 KANK1Q14678 1352 aa18.01■□□□□ 0.47
MBD1-201ENST00000269468 NASPP49321 788 aaPredicted RBP18.01■□□□□ 0.47
MBD1-201ENST00000269468 CHD1LQ86WJ1 897 aa18.01■□□□□ 0.47
MBD1-201ENST00000269468 SNX21Q969T3 373 aa18.01■□□□□ 0.47
MBD1-201ENST00000269468 DDX49Q9Y6V7 483 aaKnown RBP18.01■□□□□ 0.47
MBD1-201ENST00000269468 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
MBD1-201ENST00000269468 SKOR2Q2VWA4 1001 aaPredicted RBP18■□□□□ 0.47
MBD1-201ENST00000269468 ANP32BQ92688 251 aaKnown RBP18■□□□□ 0.47
MBD1-201ENST00000269468 ZBTB40Q9NUA8 1239 aa18■□□□□ 0.47
MBD1-201ENST00000269468 NUCB1Q02818 461 aa18■□□□□ 0.47
MBD1-201ENST00000269468 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
MBD1-201ENST00000269468 ZNF518AQ6AHZ1 1483 aa17.98■□□□□ 0.47
MBD1-201ENST00000269468 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
MBD1-201ENST00000269468 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
MBD1-201ENST00000269468 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
MBD1-201ENST00000269468 RBM10P98175 930 aaKnown RBP17.97■□□□□ 0.47
MBD1-201ENST00000269468 KIF2CQ99661 725 aa17.97■□□□□ 0.47
MBD1-201ENST00000269468 PLCH2O75038 1416 aa17.97■□□□□ 0.47
MBD1-201ENST00000269468 NCOA3Q9Y6Q9 1424 aa17.97■□□□□ 0.47
MBD1-201ENST00000269468 K7ELQ4 463 aaPredicted RBP17.97■□□□□ 0.47
MBD1-201ENST00000269468 RIPK4P57078 832 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms