RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 NEUROD1Q13562 356 aa28.64■■■□□ 2.17
CASP6-201ENST00000265164 LRPPRCP42704 1394 aaKnown RBP28.62■■■□□ 2.17
CASP6-201ENST00000265164 CDC42BPGQ6DT37 1551 aa28.61■■■□□ 2.17
CASP6-201ENST00000265164 SPATA31A6Q5VVP1 1343 aa28.61■■■□□ 2.17
CASP6-201ENST00000265164 POTEAQ6S8J7 498 aa28.6■■■□□ 2.17
CASP6-201ENST00000265164 WAPLQ7Z5K2 1190 aa28.6■■■□□ 2.17
CASP6-201ENST00000265164 LAMC1P11047 1609 aa28.59■■■□□ 2.17
CASP6-201ENST00000265164 YTHDC2Q9H6S0 1430 aaKnown RBP28.59■■■□□ 2.17
CASP6-201ENST00000265164 ORAI2Q96SN7 254 aa28.59■■■□□ 2.17
CASP6-201ENST00000265164 ABCC11Q96J66 1382 aa28.58■■■□□ 2.17
CASP6-201ENST00000265164 PLEKHH1Q9ULM0 1364 aa28.58■■■□□ 2.17
CASP6-201ENST00000265164 CFAP70Q5T0N1 1121 aa28.57■■■□□ 2.16
CASP6-201ENST00000265164 C14orf93Q9H972 538 aaKnown RBP28.57■■■□□ 2.16
CASP6-201ENST00000265164 TIMELESSQ9UNS1 1208 aa28.54■■■□□ 2.16
CASP6-201ENST00000265164 LRRC59Q96AG4 307 aaKnown RBP28.52■■■□□ 2.16
CASP6-201ENST00000265164 NUTM2BA6NNL0 878 aaPredicted RBP28.5■■■□□ 2.15
CASP6-201ENST00000265164 NUTM2EB1AL46 878 aaPredicted RBP28.5■■■□□ 2.15
CASP6-201ENST00000265164 MEX3CQ5U5Q3 659 aaKnown RBP28.5■■■□□ 2.15
CASP6-201ENST00000265164 NUTM2AQ8IVF1 878 aaPredicted RBP28.5■■■□□ 2.15
CASP6-201ENST00000265164 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
CASP6-201ENST00000265164 FMN2Q9NZ56 1722 aa28.49■■■□□ 2.15
CASP6-201ENST00000265164 NUTM2FA1L443 756 aa28.48■■■□□ 2.15
CASP6-201ENST00000265164 TONSLQ96HA7 1378 aa28.48■■■□□ 2.15
CASP6-201ENST00000265164 ADGRB1O14514 1584 aa28.47■■■□□ 2.15
CASP6-201ENST00000265164 SOS2Q07890 1332 aaPredicted RBP28.46■■■□□ 2.15
CASP6-201ENST00000265164 ESCO1Q5FWF5 840 aa28.46■■■□□ 2.15
CASP6-201ENST00000265164 DCAF11Q8TEB1 546 aa28.46■■■□□ 2.15
CASP6-201ENST00000265164 KDM2AQ9Y2K7 1162 aa28.46■■■□□ 2.15
CASP6-201ENST00000265164 RGPD8O14715 1765 aaPredicted RBP28.44■■■□□ 2.14
CASP6-201ENST00000265164 SIRT1Q96EB6 747 aa28.43■■■□□ 2.14
CASP6-201ENST00000265164 DLC1Q96QB1 1528 aa28.41■■■□□ 2.14
CASP6-201ENST00000265164 PXDNQ92626 1479 aa28.4■■■□□ 2.14
CASP6-201ENST00000265164 PRAM1Q96QH2 718 aa28.4■■■□□ 2.14
CASP6-201ENST00000265164 SAFB2Q14151 953 aaKnown RBP eCLIP28.39■■■□□ 2.14
CASP6-201ENST00000265164 COL22A1Q8NFW1 1626 aaPredicted RBP28.38■■■□□ 2.13
CASP6-201ENST00000265164 FOXO3O43524 673 aa28.38■■■□□ 2.13
CASP6-201ENST00000265164 NPHP3Q7Z494 1330 aa28.38■■■□□ 2.13
CASP6-201ENST00000265164 XPCQ01831 940 aaPredicted RBP28.37■■■□□ 2.13
CASP6-201ENST00000265164 ZNF772Q68DY9 489 aaPredicted RBP28.37■■■□□ 2.13
CASP6-201ENST00000265164 KIF1AQ12756 1690 aa28.36■■■□□ 2.13
CASP6-201ENST00000265164 AFF2P51816 1311 aa28.34■■■□□ 2.13
CASP6-201ENST00000265164 L3MBTL2Q969R5 705 aa28.34■■■□□ 2.13
CASP6-201ENST00000265164 TRAK1Q9UPV9 953 aa28.34■■■□□ 2.13
CASP6-201ENST00000265164 C8orf37Q96NL8 207 aa28.33■■■□□ 2.13
CASP6-201ENST00000265164 ADGRB2O60241 1585 aa28.32■■■□□ 2.12
CASP6-201ENST00000265164 USP32Q8NFA0 1604 aa28.32■■■□□ 2.12
CASP6-201ENST00000265164 POGKQ9P215 609 aa28.32■■■□□ 2.12
CASP6-201ENST00000265164 ADAMTS2O95450 1211 aa28.31■■■□□ 2.12
CASP6-201ENST00000265164 STAC3Q96MF2 364 aa28.31■■■□□ 2.12
CASP6-201ENST00000265164 ARHGEF28Q8N1W1 1705 aaKnown RBP28.3■■■□□ 2.12
CASP6-201ENST00000265164 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
CASP6-201ENST00000265164 MARF1Q9Y4F3 1742 aaKnown RBP28.25■■■□□ 2.11
CASP6-201ENST00000265164 KIAA1210Q9ULL0 1709 aa28.24■■■□□ 2.11
CASP6-201ENST00000265164 MINK1Q8N4C8 1332 aaPredicted RBP28.24■■■□□ 2.11
CASP6-201ENST00000265164 PHF8Q9UPP1 1060 aa28.23■■■□□ 2.11
CASP6-201ENST00000265164 RXRBP28702 533 aa28.23■■■□□ 2.11
CASP6-201ENST00000265164 NGLY1Q96IV0 654 aa28.23■■■□□ 2.11
CASP6-201ENST00000265164 ANKARQ7Z5J8 1434 aa28.21■■■□□ 2.11
CASP6-201ENST00000265164 KRT28Q7Z3Y7 464 aa28.2■■■□□ 2.1
CASP6-201ENST00000265164 SPATA31A3Q5VYP0 1347 aa28.2■■■□□ 2.1
CASP6-201ENST00000265164 QTRT2Q9H974 415 aaKnown RBP28.18■■■□□ 2.1
CASP6-201ENST00000265164 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
CASP6-201ENST00000265164 PMFBP1Q8TBY8 1022 aa28.18■■■□□ 2.1
CASP6-201ENST00000265164 PRR36Q9H6K5 1346 aa28.17■■■□□ 2.1
CASP6-201ENST00000265164 CDK12Q9NYV4 1490 aaPredicted RBP28.16■■■□□ 2.1
CASP6-201ENST00000265164 TNS3Q68CZ2 1445 aa28.15■■■□□ 2.1
CASP6-201ENST00000265164 WASLO00401 505 aaPredicted RBP28.14■■■□□ 2.1
CASP6-201ENST00000265164 NBPF1Q3BBV0 1214 aa28.14■■■□□ 2.1
CASP6-201ENST00000265164 USP21Q9UK80 565 aa28.14■■■□□ 2.1
CASP6-201ENST00000265164 RGS12O14924 1447 aa28.13■■■□□ 2.09
CASP6-201ENST00000265164 FNBP4Q8N3X1 1017 aaPredicted RBP28.13■■■□□ 2.09
CASP6-201ENST00000265164 TRPM3Q9HCF6 1732 aaPredicted RBP28.13■■■□□ 2.09
CASP6-201ENST00000265164 ABCA3Q99758 1704 aa28.12■■■□□ 2.09
CASP6-201ENST00000265164 RBM6P78332 1123 aaKnown RBP28.11■■■□□ 2.09
CASP6-201ENST00000265164 PSME1Q06323 249 aa28.11■■■□□ 2.09
CASP6-201ENST00000265164 EIF3AQ14152 1382 aaKnown RBP28.1■■■□□ 2.09
CASP6-201ENST00000265164 NBPF8Q3BBV2 869 aa28.1■■■□□ 2.09
CASP6-201ENST00000265164 SBNO1A3KN83 1393 aa28.1■■■□□ 2.09
CASP6-201ENST00000265164 BCL9LQ86UU0 1499 aa28.09■■■□□ 2.09
CASP6-201ENST00000265164 ITSN1Q15811 1721 aa28.09■■■□□ 2.09
CASP6-201ENST00000265164 ATP7BP35670 1465 aa28.08■■■□□ 2.09
CASP6-201ENST00000265164 ATRNO75882 1429 aa28.07■■■□□ 2.08
CASP6-201ENST00000265164 PLEKHG5O94827 1062 aa28.07■■■□□ 2.08
CASP6-201ENST00000265164 CABLES1Q8TDN4 633 aa28.07■■■□□ 2.08
CASP6-201ENST00000265164 ALS2Q96Q42 1657 aa28.07■■■□□ 2.08
CASP6-201ENST00000265164 TRPC5Q9UL62 973 aaPredicted RBP28.06■■■□□ 2.08
CASP6-201ENST00000265164 LMOD2Q6P5Q4 547 aa28.05■■■□□ 2.08
CASP6-201ENST00000265164 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.05■■■□□ 2.08
CASP6-201ENST00000265164 TOPAZ1Q8N9V7 1692 aa28.03■■■□□ 2.08
CASP6-201ENST00000265164 TRPM1Q7Z4N2 1603 aa28.03■■■□□ 2.08
CASP6-201ENST00000265164 ARHGEF10O15013 1369 aa28.03■■■□□ 2.08
CASP6-201ENST00000265164 UPF1Q92900 1129 aaKnown RBP eCLIP28.02■■■□□ 2.08
CASP6-201ENST00000265164 SLIT2O94813 1529 aa28.02■■■□□ 2.08
CASP6-201ENST00000265164 NUDT16Q96DE0 195 aaKnown RBP28.02■■■□□ 2.08
CASP6-201ENST00000265164 PLCH1Q4KWH8 1693 aa28.01■■■□□ 2.07
CASP6-201ENST00000265164 CDK19Q9BWU1 502 aa28.01■■■□□ 2.07
CASP6-201ENST00000265164 QRICH2Q9H0J4 1663 aa28■■■□□ 2.07
CASP6-201ENST00000265164 EP400Q96L91 3159 aa28■■■□□ 2.07
CASP6-201ENST00000265164 GPRASP1Q5JY77 1395 aa27.99■■■□□ 2.07
CASP6-201ENST00000265164 HAP1P54257 671 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms