RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 LAS1LQ9Y4W2 734 aaKnown RBP29.54■■■□□ 2.32
MCF2L-201ENST00000261963 POLR3AO14802 1390 aaPredicted RBP29.53■■■□□ 2.32
MCF2L-201ENST00000261963 GLI2P10070 1586 aa29.53■■■□□ 2.32
MCF2L-201ENST00000261963 VGFO15240 615 aaPredicted RBP29.51■■■□□ 2.31
MCF2L-201ENST00000261963 PPM1GO15355 546 aaPredicted RBP29.51■■■□□ 2.31
MCF2L-201ENST00000261963 SPINK5Q9NQ38 1064 aaPredicted RBP29.51■■■□□ 2.31
MCF2L-201ENST00000261963 IDI1Q13907 227 aa29.5■■■□□ 2.31
MCF2L-201ENST00000261963 PDE4AP27815 886 aa29.47■■■□□ 2.31
MCF2L-201ENST00000261963 MORC1Q86VD1 984 aa29.46■■■□□ 2.31
MCF2L-201ENST00000261963 ARHGEF28Q8N1W1 1705 aaKnown RBP29.46■■■□□ 2.31
MCF2L-201ENST00000261963 TULP4Q9NRJ4 1543 aa29.46■■■□□ 2.31
MCF2L-201ENST00000261963 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.45■■■□□ 2.31
MCF2L-201ENST00000261963 PUS7Q96PZ0 661 aaKnown RBP29.44■■■□□ 2.3
MCF2L-201ENST00000261963 ZFYVE9O95405 1425 aa29.43■■■□□ 2.3
MCF2L-201ENST00000261963 USP32Q8NFA0 1604 aa29.43■■■□□ 2.3
MCF2L-201ENST00000261963 DMRT2Q9Y5R5 561 aa29.43■■■□□ 2.3
MCF2L-201ENST00000261963 SLC52A1Q9NWF4 448 aa29.43■■■□□ 2.3
MCF2L-201ENST00000261963 NGEFQ8N5V2 710 aa29.42■■■□□ 2.3
MCF2L-201ENST00000261963 BACH2Q9BYV9 841 aa29.42■■■□□ 2.3
MCF2L-201ENST00000261963 EVC2Q86UK5 1308 aa29.41■■■□□ 2.3
MCF2L-201ENST00000261963 NKTRP30414 1462 aaKnown RBP29.41■■■□□ 2.3
MCF2L-201ENST00000261963 SHPRHQ149N8 1683 aa29.41■■■□□ 2.3
MCF2L-201ENST00000261963 MS4A1P11836 297 aa29.41■■■□□ 2.3
MCF2L-201ENST00000261963 TNNT2P45379 298 aaPredicted RBP29.41■■■□□ 2.3
MCF2L-201ENST00000261963 E9PSI1 815 aa29.4■■■□□ 2.3
MCF2L-201ENST00000261963 CGNL1Q0VF96 1302 aa29.38■■■□□ 2.29
MCF2L-201ENST00000261963 KDM2BQ8NHM5 1336 aa29.37■■■□□ 2.29
MCF2L-201ENST00000261963 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.37■■■□□ 2.29
MCF2L-201ENST00000261963 ANKRD36BQ8N2N9 1353 aa29.37■■■□□ 2.29
MCF2L-201ENST00000261963 PREX1Q8TCU6 1659 aa29.36■■■□□ 2.29
MCF2L-201ENST00000261963 CYB5RLQ6IPT4 315 aa29.36■■■□□ 2.29
MCF2L-201ENST00000261963 SKAP1Q86WV1 359 aa29.35■■■□□ 2.29
MCF2L-201ENST00000261963 CABP2Q9NPB3 220 aa29.35■■■□□ 2.29
MCF2L-201ENST00000261963 TMEM131LA2VDJ0 1609 aa29.35■■■□□ 2.29
MCF2L-201ENST00000261963 WWC1Q8IX03 1113 aa29.34■■■□□ 2.29
MCF2L-201ENST00000261963 MYO5BQ9ULV0 1848 aa29.33■■■□□ 2.29
MCF2L-201ENST00000261963 SAFB2Q14151 953 aaKnown RBP eCLIP29.32■■■□□ 2.28
MCF2L-201ENST00000261963 UBE2Q2Q8WVN8 375 aa29.32■■■□□ 2.28
MCF2L-201ENST00000261963 MTHFSP49914 203 aa29.32■■■□□ 2.28
MCF2L-201ENST00000261963 BCAR3O75815 825 aa29.31■■■□□ 2.28
MCF2L-201ENST00000261963 DDRGK1Q96HY6 314 aa29.31■■■□□ 2.28
MCF2L-201ENST00000261963 GSE1Q14687 1217 aa29.3■■■□□ 2.28
MCF2L-201ENST00000261963 IQSEC2Q5JU85 1478 aa29.3■■■□□ 2.28
MCF2L-201ENST00000261963 SENP3Q9H4L4 574 aaPredicted RBP29.3■■■□□ 2.28
MCF2L-201ENST00000261963 STK26Q9P289 416 aa29.3■■■□□ 2.28
MCF2L-201ENST00000261963 NSD2O96028 1365 aa29.3■■■□□ 2.28
MCF2L-201ENST00000261963 FBXO31Q5XUX0 539 aaPredicted RBP29.29■■■□□ 2.28
MCF2L-201ENST00000261963 RUNDC1Q96C34 613 aa29.29■■■□□ 2.28
MCF2L-201ENST00000261963 BRPF3Q9ULD4 1205 aa29.28■■■□□ 2.28
MCF2L-201ENST00000261963 PTPRMP28827 1452 aa29.27■■■□□ 2.28
MCF2L-201ENST00000261963 CENPQQ7L2Z9 268 aaPredicted RBP29.27■■■□□ 2.28
MCF2L-201ENST00000261963 PHF23Q9BUL5 403 aaPredicted RBP29.26■■■□□ 2.28
MCF2L-201ENST00000261963 FAM69CQ0P6D2 419 aa29.25■■■□□ 2.27
MCF2L-201ENST00000261963 TCP11L2Q8N4U5 519 aa29.25■■■□□ 2.27
MCF2L-201ENST00000261963 RRP7AQ9Y3A4 280 aaKnown RBP29.24■■■□□ 2.27
MCF2L-201ENST00000261963 A0A1W2PP64 1363 aa29.24■■■□□ 2.27
MCF2L-201ENST00000261963 CFAP53Q96M91 514 aa29.23■■■□□ 2.27
MCF2L-201ENST00000261963 NINLQ9Y2I6 1382 aa29.23■■■□□ 2.27
MCF2L-201ENST00000261963 ABCC11Q96J66 1382 aa29.22■■■□□ 2.27
MCF2L-201ENST00000261963 DIP2BQ9P265 1576 aa29.22■■■□□ 2.27
MCF2L-201ENST00000261963 YTHDC2Q9H6S0 1430 aaKnown RBP29.22■■■□□ 2.27
MCF2L-201ENST00000261963 NEUROD2Q15784 382 aa29.22■■■□□ 2.27
MCF2L-201ENST00000261963 SRPK2P78362 688 aaKnown RBP29.21■■■□□ 2.27
MCF2L-201ENST00000261963 PRAM1Q96QH2 718 aa29.2■■■□□ 2.27
MCF2L-201ENST00000261963 MINK1Q8N4C8 1332 aaPredicted RBP29.18■■■□□ 2.26
MCF2L-201ENST00000261963 NFKBIBQ15653 356 aa29.17■■■□□ 2.26
MCF2L-201ENST00000261963 ATAD2Q6PL18 1390 aa29.16■■■□□ 2.26
MCF2L-201ENST00000261963 ALKQ9UM73 1620 aa29.16■■■□□ 2.26
MCF2L-201ENST00000261963 CCDC27Q2M243 656 aa29.15■■■□□ 2.26
MCF2L-201ENST00000261963 WDR63Q8IWG1 891 aa29.15■■■□□ 2.26
MCF2L-201ENST00000261963 RIMBP3CA6NJZ7 1639 aa29.15■■■□□ 2.26
MCF2L-201ENST00000261963 RIMBP3BA6NNM3 1639 aa29.15■■■□□ 2.26
MCF2L-201ENST00000261963 RIMBP3Q9UFD9 1639 aa29.15■■■□□ 2.26
MCF2L-201ENST00000261963 REREQ9P2R6 1566 aa29.15■■■□□ 2.26
MCF2L-201ENST00000261963 CD163L1Q9NR16 1453 aa29.15■■■□□ 2.26
MCF2L-201ENST00000261963 PDE3AQ14432 1141 aa29.14■■■□□ 2.26
MCF2L-201ENST00000261963 AGLP35573 1532 aa29.14■■■□□ 2.26
MCF2L-201ENST00000261963 CLTCQ00610 1675 aaKnown RBP29.14■■■□□ 2.26
MCF2L-201ENST00000261963 POGKQ9P215 609 aa29.14■■■□□ 2.26
MCF2L-201ENST00000261963 GGNBP2Q9H3C7 697 aa29.13■■■□□ 2.25
MCF2L-201ENST00000261963 U2AF1L5P0DN76 240 aaPredicted RBP29.12■■■□□ 2.25
MCF2L-201ENST00000261963 U2AF1Q01081 240 aaKnown RBP eCLIP29.12■■■□□ 2.25
MCF2L-201ENST00000261963 FRAT1Q92837 279 aaPredicted RBP29.11■■■□□ 2.25
MCF2L-201ENST00000261963 NLRP1Q9C000 1473 aa29.11■■■□□ 2.25
MCF2L-201ENST00000261963 NCBP3Q53F19 620 aaKnown RBP29.11■■■□□ 2.25
MCF2L-201ENST00000261963 PPP6R1Q9UPN7 881 aa29.1■■■□□ 2.25
MCF2L-201ENST00000261963 RARSP54136 660 aaKnown RBP29.1■■■□□ 2.25
MCF2L-201ENST00000261963 TSPOAP1O95153 1857 aa29.1■■■□□ 2.25
MCF2L-201ENST00000261963 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
MCF2L-201ENST00000261963 ARHGEF40Q8TER5 1519 aa29.09■■■□□ 2.25
MCF2L-201ENST00000261963 FYB1O15117 783 aa29.09■■■□□ 2.25
MCF2L-201ENST00000261963 TERF2IPQ9NYB0 399 aa29.09■■■□□ 2.25
MCF2L-201ENST00000261963 EIF5BO60841 1220 aaKnown RBP29.09■■■□□ 2.25
MCF2L-201ENST00000261963 STAG3Q9UJ98 1225 aa29.09■■■□□ 2.25
MCF2L-201ENST00000261963 COL3A1P02461 1466 aaPredicted RBP29.08■■■□□ 2.25
MCF2L-201ENST00000261963 PANK1Q8TE04 598 aa29.08■■■□□ 2.25
MCF2L-201ENST00000261963 DAXXQ9UER7 740 aaPredicted RBP29.08■■■□□ 2.25
MCF2L-201ENST00000261963 MED14O60244 1454 aa29.07■■■□□ 2.24
MCF2L-201ENST00000261963 A2ML1A8K2U0 1454 aa29.07■■■□□ 2.24
MCF2L-201ENST00000261963 CDK19Q9BWU1 502 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms