RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 PANK3Q9H999 370 aa22.95■■□□□ 1.26
HLA-F-216ENST00000259951 NPHP4O75161 1426 aaPredicted RBP22.94■■□□□ 1.26
HLA-F-216ENST00000259951 WAPLQ7Z5K2 1190 aa22.93■■□□□ 1.26
HLA-F-216ENST00000259951 PRKRIP1Q9H875 184 aaPredicted RBP22.93■■□□□ 1.26
HLA-F-216ENST00000259951 PTPRUQ92729 1446 aa22.93■■□□□ 1.26
HLA-F-216ENST00000259951 XRN1Q8IZH2 1706 aaKnown RBP22.92■■□□□ 1.26
HLA-F-216ENST00000259951 PTCH1Q13635 1447 aa22.92■■□□□ 1.26
HLA-F-216ENST00000259951 AMOTL2Q9Y2J4 779 aa22.92■■□□□ 1.26
HLA-F-216ENST00000259951 KTN1Q86UP2 1357 aaKnown RBP22.92■■□□□ 1.26
HLA-F-216ENST00000259951 PLEKHH1Q9ULM0 1364 aa22.92■■□□□ 1.26
HLA-F-216ENST00000259951 NINLQ9Y2I6 1382 aa22.92■■□□□ 1.26
HLA-F-216ENST00000259951 ATAD2Q6PL18 1390 aa22.91■■□□□ 1.26
HLA-F-216ENST00000259951 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
HLA-F-216ENST00000259951 ROBO2Q9HCK4 1378 aa22.9■■□□□ 1.26
HLA-F-216ENST00000259951 PER1O15534 1290 aaPredicted RBP22.9■■□□□ 1.26
HLA-F-216ENST00000259951 SRPK2P78362 688 aaKnown RBP22.9■■□□□ 1.26
HLA-F-216ENST00000259951 KNSTRNQ9Y448 316 aa22.88■■□□□ 1.25
HLA-F-216ENST00000259951 ADGRB2O60241 1585 aa22.87■■□□□ 1.25
HLA-F-216ENST00000259951 TMC1Q8TDI8 760 aa22.87■■□□□ 1.25
HLA-F-216ENST00000259951 CDK19Q9BWU1 502 aa22.87■■□□□ 1.25
HLA-F-216ENST00000259951 CABP2Q9NPB3 220 aa22.87■■□□□ 1.25
HLA-F-216ENST00000259951 NCKAP5LQ9HCH0 1330 aa22.87■■□□□ 1.25
HLA-F-216ENST00000259951 RALBP1Q15311 655 aa22.86■■□□□ 1.25
HLA-F-216ENST00000259951 WASLO00401 505 aaPredicted RBP22.84■■□□□ 1.25
HLA-F-216ENST00000259951 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.84■■□□□ 1.25
HLA-F-216ENST00000259951 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
HLA-F-216ENST00000259951 NPC1L1Q9UHC9 1359 aa22.82■■□□□ 1.24
HLA-F-216ENST00000259951 ANKRD36BQ8N2N9 1353 aa22.81■■□□□ 1.24
HLA-F-216ENST00000259951 KCNA6P17658 529 aa22.8■■□□□ 1.24
HLA-F-216ENST00000259951 PARD3Q8TEW0 1356 aa22.79■■□□□ 1.24
HLA-F-216ENST00000259951 TERF2IPQ9NYB0 399 aa22.79■■□□□ 1.24
HLA-F-216ENST00000259951 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
HLA-F-216ENST00000259951 STRCQ7RTU9 1775 aa22.78■■□□□ 1.24
HLA-F-216ENST00000259951 USP32Q8NFA0 1604 aa22.78■■□□□ 1.24
HLA-F-216ENST00000259951 NWD1Q149M9 1564 aa22.78■■□□□ 1.24
HLA-F-216ENST00000259951 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.24
HLA-F-216ENST00000259951 MYBBP1AQ9BQG0 1328 aaKnown RBP22.76■■□□□ 1.23
HLA-F-216ENST00000259951 AMER1Q5JTC6 1135 aaPredicted RBP22.76■■□□□ 1.23
HLA-F-216ENST00000259951 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
HLA-F-216ENST00000259951 CARD14Q9BXL6 1004 aa22.75■■□□□ 1.23
HLA-F-216ENST00000259951 ATP7BP35670 1465 aa22.75■■□□□ 1.23
HLA-F-216ENST00000259951 CC2D1BQ5T0F9 858 aaKnown RBP22.75■■□□□ 1.23
HLA-F-216ENST00000259951 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
HLA-F-216ENST00000259951 NSD3Q9BZ95 1437 aa22.75■■□□□ 1.23
HLA-F-216ENST00000259951 NUDT16Q96DE0 195 aaKnown RBP22.73■■□□□ 1.23
HLA-F-216ENST00000259951 CCDC61Q9Y6R9 512 aa22.72■■□□□ 1.23
HLA-F-216ENST00000259951 MRS2Q9HD23 443 aa22.71■■□□□ 1.23
HLA-F-216ENST00000259951 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
HLA-F-216ENST00000259951 A0A1W2PP64 1363 aa22.71■■□□□ 1.23
HLA-F-216ENST00000259951 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
HLA-F-216ENST00000259951 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
HLA-F-216ENST00000259951 ITSN1Q15811 1721 aa22.71■■□□□ 1.23
HLA-F-216ENST00000259951 NKTRP30414 1462 aaKnown RBP22.71■■□□□ 1.23
HLA-F-216ENST00000259951 TOPAZ1Q8N9V7 1692 aa22.7■■□□□ 1.22
HLA-F-216ENST00000259951 CD163L1Q9NR16 1453 aa22.69■■□□□ 1.22
HLA-F-216ENST00000259951 BRD4O60885 1362 aaPredicted RBP22.69■■□□□ 1.22
HLA-F-216ENST00000259951 NSD2O96028 1365 aa22.69■■□□□ 1.22
HLA-F-216ENST00000259951 NLRP13Q86W25 1043 aa22.68■■□□□ 1.22
HLA-F-216ENST00000259951 YTHDC1Q96MU7 727 aaKnown RBP22.68■■□□□ 1.22
HLA-F-216ENST00000259951 CDC42BPGQ6DT37 1551 aa22.68■■□□□ 1.22
HLA-F-216ENST00000259951 NALCNQ8IZF0 1738 aa22.68■■□□□ 1.22
HLA-F-216ENST00000259951 FMN2Q9NZ56 1722 aa22.67■■□□□ 1.22
HLA-F-216ENST00000259951 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
HLA-F-216ENST00000259951 ANKARQ7Z5J8 1434 aa22.66■■□□□ 1.22
HLA-F-216ENST00000259951 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
HLA-F-216ENST00000259951 PRR36Q9H6K5 1346 aa22.65■■□□□ 1.22
HLA-F-216ENST00000259951 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
HLA-F-216ENST00000259951 ZNF692Q9BU19 519 aaPredicted RBP22.64■■□□□ 1.21
HLA-F-216ENST00000259951 MON2Q7Z3U7 1717 aa22.63■■□□□ 1.21
HLA-F-216ENST00000259951 CCDC184Q52MB2 194 aa22.63■■□□□ 1.21
HLA-F-216ENST00000259951 PROSER2Q86WR7 435 aaPredicted RBP22.63■■□□□ 1.21
HLA-F-216ENST00000259951 ANKRD26Q9UPS8 1709 aa22.62■■□□□ 1.21
HLA-F-216ENST00000259951 KIF20BQ96Q89 1820 aa22.62■■□□□ 1.21
HLA-F-216ENST00000259951 PLEKHG3A1L390 1219 aa22.62■■□□□ 1.21
HLA-F-216ENST00000259951 FBXO41Q8TF61 875 aa22.62■■□□□ 1.21
HLA-F-216ENST00000259951 CERKQ8TCT0 537 aa22.61■■□□□ 1.21
HLA-F-216ENST00000259951 EDC4Q6P2E9 1401 aaKnown RBP22.61■■□□□ 1.21
HLA-F-216ENST00000259951 RGPD8O14715 1765 aaPredicted RBP22.61■■□□□ 1.21
HLA-F-216ENST00000259951 CENPBP07199 599 aaPredicted RBP22.6■■□□□ 1.21
HLA-F-216ENST00000259951 C14orf37Q86TY3 774 aa22.6■■□□□ 1.21
HLA-F-216ENST00000259951 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
HLA-F-216ENST00000259951 NCOA3Q9Y6Q9 1424 aa22.6■■□□□ 1.21
HLA-F-216ENST00000259951 PPP2R1AP30153 589 aa22.6■■□□□ 1.21
HLA-F-216ENST00000259951 STRCP1A6NGW2 1772 aa22.59■■□□□ 1.21
HLA-F-216ENST00000259951 NUTM2FA1L443 756 aa22.57■■□□□ 1.2
HLA-F-216ENST00000259951 ACEP12821 1306 aa22.54■■□□□ 1.2
HLA-F-216ENST00000259951 FYB1O15117 783 aa22.54■■□□□ 1.2
HLA-F-216ENST00000259951 FAM9BQ8IZU0 186 aa22.54■■□□□ 1.2
HLA-F-216ENST00000259951 PNISRQ8TF01 805 aaKnown RBP22.53■■□□□ 1.2
HLA-F-216ENST00000259951 RBM33Q96EV2 1170 aaKnown RBP22.53■■□□□ 1.2
HLA-F-216ENST00000259951 C19orf44Q9H6X5 657 aa22.53■■□□□ 1.2
HLA-F-216ENST00000259951 POLR3AO14802 1390 aaPredicted RBP22.53■■□□□ 1.2
HLA-F-216ENST00000259951 NRKQ7Z2Y5 1582 aa22.52■■□□□ 1.2
HLA-F-216ENST00000259951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
HLA-F-216ENST00000259951 NGDNQ8NEJ9 315 aaKnown RBP22.51■■□□□ 1.19
HLA-F-216ENST00000259951 TMEM94Q12767 1356 aa22.51■■□□□ 1.19
HLA-F-216ENST00000259951 USP6P35125 1406 aa22.51■■□□□ 1.19
HLA-F-216ENST00000259951 DCCP43146 1447 aa22.51■■□□□ 1.19
HLA-F-216ENST00000259951 GGNBP2Q9H3C7 697 aa22.5■■□□□ 1.19
HLA-F-216ENST00000259951 ZNF335Q9H4Z2 1342 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms