RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 INSRP06213 1382 aa16.81■□□□□ 0.28
PGBD1-201ENST00000259883 LNPKQ9C0E8 428 aa16.81■□□□□ 0.28
PGBD1-201ENST00000259883 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
PGBD1-201ENST00000259883 DZIP1LQ8IYY4 767 aaKnown RBP16.81■□□□□ 0.28
PGBD1-201ENST00000259883 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
PGBD1-201ENST00000259883 PANK2Q9BZ23 570 aa16.8■□□□□ 0.28
PGBD1-201ENST00000259883 MINK1Q8N4C8 1332 aaPredicted RBP16.8■□□□□ 0.28
PGBD1-201ENST00000259883 ZKSCAN2Q63HK3 967 aa16.8■□□□□ 0.28
PGBD1-201ENST00000259883 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
PGBD1-201ENST00000259883 SSH1Q8WYL5 1049 aa16.78■□□□□ 0.28
PGBD1-201ENST00000259883 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
PGBD1-201ENST00000259883 MVPQ14764 893 aaKnown RBP16.78■□□□□ 0.28
PGBD1-201ENST00000259883 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
PGBD1-201ENST00000259883 MYH16Q9H6N6 1097 aa16.78■□□□□ 0.28
PGBD1-201ENST00000259883 SYNMO15061 1565 aa16.78■□□□□ 0.28
PGBD1-201ENST00000259883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
PGBD1-201ENST00000259883 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
PGBD1-201ENST00000259883 TRIM27P14373 513 aa16.77■□□□□ 0.27
PGBD1-201ENST00000259883 HSP90AA1P07900 732 aaKnown RBP16.75■□□□□ 0.27
PGBD1-201ENST00000259883 TMEM57Q8N5G2 664 aa16.75■□□□□ 0.27
PGBD1-201ENST00000259883 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
PGBD1-201ENST00000259883 RIPK4P57078 832 aa16.75■□□□□ 0.27
PGBD1-201ENST00000259883 CHD1O14646 1710 aa16.74■□□□□ 0.27
PGBD1-201ENST00000259883 APBB1O00213 710 aa16.74■□□□□ 0.27
PGBD1-201ENST00000259883 HMOX1P09601 288 aa16.74■□□□□ 0.27
PGBD1-201ENST00000259883 RRAGDQ9NQL2 400 aaPredicted RBP16.74■□□□□ 0.27
PGBD1-201ENST00000259883 RNF17Q9BXT8 1623 aaKnown RBP16.73■□□□□ 0.27
PGBD1-201ENST00000259883 PLXNC1O60486 1568 aa16.73■□□□□ 0.27
PGBD1-201ENST00000259883 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
PGBD1-201ENST00000259883 POLR3AO14802 1390 aaPredicted RBP16.73■□□□□ 0.27
PGBD1-201ENST00000259883 LAMC1P11047 1609 aa16.73■□□□□ 0.27
PGBD1-201ENST00000259883 KDM5AP29375 1690 aaKnown RBP16.73■□□□□ 0.27
PGBD1-201ENST00000259883 PTPRTO14522 1441 aa16.72■□□□□ 0.27
PGBD1-201ENST00000259883 TRPM2O94759 1503 aa16.71■□□□□ 0.27
PGBD1-201ENST00000259883 FANCAO15360 1455 aa16.71■□□□□ 0.27
PGBD1-201ENST00000259883 WDR63Q8IWG1 891 aa16.71■□□□□ 0.27
PGBD1-201ENST00000259883 MYOM1P52179 1685 aa16.71■□□□□ 0.27
PGBD1-201ENST00000259883 ABCC1P33527 1531 aa16.71■□□□□ 0.27
PGBD1-201ENST00000259883 RAPGEF3O95398 923 aa16.71■□□□□ 0.27
PGBD1-201ENST00000259883 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
PGBD1-201ENST00000259883 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
PGBD1-201ENST00000259883 TMPOP42166 694 aaKnown RBP16.7■□□□□ 0.26
PGBD1-201ENST00000259883 HSCBQ8IWL3 235 aa16.7■□□□□ 0.26
PGBD1-201ENST00000259883 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
PGBD1-201ENST00000259883 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
PGBD1-201ENST00000259883 NAP1L5Q96NT1 182 aaPredicted RBP16.7■□□□□ 0.26
PGBD1-201ENST00000259883 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
PGBD1-201ENST00000259883 MCM4P33991 863 aa16.69■□□□□ 0.26
PGBD1-201ENST00000259883 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
PGBD1-201ENST00000259883 HSP90AB1P08238 724 aaKnown RBP16.68■□□□□ 0.26
PGBD1-201ENST00000259883 XRCC6P12956 609 aaKnown RBP eCLIP16.68■□□□□ 0.26
PGBD1-201ENST00000259883 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
PGBD1-201ENST00000259883 TRAK2O60296 914 aa16.68■□□□□ 0.26
PGBD1-201ENST00000259883 C14orf93Q9H972 538 aaKnown RBP16.68■□□□□ 0.26
PGBD1-201ENST00000259883 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
PGBD1-201ENST00000259883 SPHKAPQ2M3C7 1700 aa16.67■□□□□ 0.26
PGBD1-201ENST00000259883 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
PGBD1-201ENST00000259883 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
PGBD1-201ENST00000259883 ABCA6Q8N139 1617 aa16.66■□□□□ 0.26
PGBD1-201ENST00000259883 ZFYVE16Q7Z3T8 1539 aa16.66■□□□□ 0.26
PGBD1-201ENST00000259883 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
PGBD1-201ENST00000259883 SOX12O15370 315 aa16.65■□□□□ 0.26
PGBD1-201ENST00000259883 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
PGBD1-201ENST00000259883 CEP152O94986 1710 aa16.65■□□□□ 0.26
PGBD1-201ENST00000259883 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
PGBD1-201ENST00000259883 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
PGBD1-201ENST00000259883 DDX19BQ9UMR2 479 aa16.65■□□□□ 0.26
PGBD1-201ENST00000259883 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
PGBD1-201ENST00000259883 NGEFQ8N5V2 710 aa16.64■□□□□ 0.25
PGBD1-201ENST00000259883 NLRP1Q9C000 1473 aa16.64■□□□□ 0.25
PGBD1-201ENST00000259883 PRKAR2BP31323 418 aa16.64■□□□□ 0.25
PGBD1-201ENST00000259883 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
PGBD1-201ENST00000259883 ATP7AQ04656 1500 aa16.64■□□□□ 0.25
PGBD1-201ENST00000259883 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
PGBD1-201ENST00000259883 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
PGBD1-201ENST00000259883 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
PGBD1-201ENST00000259883 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
PGBD1-201ENST00000259883 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
PGBD1-201ENST00000259883 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
PGBD1-201ENST00000259883 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
PGBD1-201ENST00000259883 ATAD2Q6PL18 1390 aa16.62■□□□□ 0.25
PGBD1-201ENST00000259883 DCTN1Q14203 1278 aa16.61■□□□□ 0.25
PGBD1-201ENST00000259883 FYB1O15117 783 aa16.61■□□□□ 0.25
PGBD1-201ENST00000259883 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
PGBD1-201ENST00000259883 IDI1Q13907 227 aa16.61■□□□□ 0.25
PGBD1-201ENST00000259883 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
PGBD1-201ENST00000259883 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
PGBD1-201ENST00000259883 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
PGBD1-201ENST00000259883 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
PGBD1-201ENST00000259883 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
PGBD1-201ENST00000259883 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
PGBD1-201ENST00000259883 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
PGBD1-201ENST00000259883 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
PGBD1-201ENST00000259883 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
PGBD1-201ENST00000259883 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
PGBD1-201ENST00000259883 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
PGBD1-201ENST00000259883 FAM83GA6ND36 823 aa16.59■□□□□ 0.25
PGBD1-201ENST00000259883 WAPLQ7Z5K2 1190 aa16.59■□□□□ 0.25
PGBD1-201ENST00000259883 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.24
PGBD1-201ENST00000259883 MLECQ14165 292 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms