RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 FAM135AQ9P2D6 1515 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 HMGN5P82970 282 aaKnown RBP5.79□□□□□ -1.48
RC3H1-201ENST00000258349 EXOC6Q8TAG9 804 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 BRMS1Q9HCU9 246 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 CCDC173Q0VFZ6 552 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 WWC1Q8IX03 1113 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 RUNDC1Q96C34 613 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 CASKIN1Q8WXD9 1431 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 CCDC7Q96M83 1385 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 ST20-MTHFSA0A0A6YYL1 179 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 API5Q9BZZ5 524 aaKnown RBP5.79□□□□□ -1.48
RC3H1-201ENST00000258349 PATL2C9JE40 543 aaKnown RBP5.79□□□□□ -1.48
RC3H1-201ENST00000258349 PSMA5P28066 241 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 CCDC191Q8NCU4 936 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 PLIN1O60240 522 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 MBD3O95983 291 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 TAF3Q5VWG9 929 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 CAGE1Q8TC20 777 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 ERICH2A1L162 156 aa5.79□□□□□ -1.48
RC3H1-201ENST00000258349 DDX58O95786 925 aaKnown RBP5.78□□□□□ -1.48
RC3H1-201ENST00000258349 HSP90AB4PQ58FF6 505 aa5.78□□□□□ -1.48
RC3H1-201ENST00000258349 FGD5Q6ZNL6 1462 aa5.78□□□□□ -1.48
RC3H1-201ENST00000258349 FOXD4L6Q3SYB3 417 aaPredicted RBP5.78□□□□□ -1.48
RC3H1-201ENST00000258349 FOXD4L3Q6VB84 417 aaPredicted RBP5.78□□□□□ -1.48
RC3H1-201ENST00000258349 PDCP20941 246 aa5.78□□□□□ -1.48
RC3H1-201ENST00000258349 MCM2P49736 904 aa5.78□□□□□ -1.48
RC3H1-201ENST00000258349 TSPY26PQ9H489 355 aa5.78□□□□□ -1.48
RC3H1-201ENST00000258349 CDC45O75419 566 aa5.78□□□□□ -1.48
RC3H1-201ENST00000258349 NFXL1Q6ZNB6 911 aa5.78□□□□□ -1.48
RC3H1-201ENST00000258349 EIF2AK4Q9P2K8 1649 aaKnown RBP5.78□□□□□ -1.48
RC3H1-201ENST00000258349 NAP1L1P55209 391 aaKnown RBP5.78□□□□□ -1.48
RC3H1-201ENST00000258349 PCF11O94913 1555 aaKnown RBP5.77□□□□□ -1.49
RC3H1-201ENST00000258349 HIP1O00291 1037 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 TTC5Q8N0Z6 440 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 HNRNPMP52272 730 aaKnown RBP eCLIP5.77□□□□□ -1.49
RC3H1-201ENST00000258349 G3BP1Q13283 466 aaKnown RBP eCLIP5.77□□□□□ -1.49
RC3H1-201ENST00000258349 TXLNBQ8N3L3 684 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 LEKR1Q6ZMV7 388 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 VPS37DQ86XT2 251 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 CNTROBQ8N137 903 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 COG6Q9Y2V7 657 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 KIF3BO15066 747 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 NCOA2Q15596 1464 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 SMARCE1Q969G3 411 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 VPS37CA5D8V6 355 aaPredicted RBP5.77□□□□□ -1.49
RC3H1-201ENST00000258349 XBP1P17861 261 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 SLC4A3P48751 1232 aa5.77□□□□□ -1.49
RC3H1-201ENST00000258349 APPP05067 770 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 GTF2E1P29083 439 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 NFKBIBQ15653 356 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 VGFO15240 615 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 KINO60870 393 aaKnown RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 ATAD2BQ9ULI0 1458 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 POLA1P09884 1462 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 CCDC43Q96MW1 224 aaKnown RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 SMG6Q86US8 1419 aaKnown RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 RABEP1Q15276 862 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 CT47A1Q5JQC4 288 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 ODF2Q5BJF6 829 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 IQCEQ6IPM2 695 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 H0YHG0 523 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 STAC3Q96MF2 364 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 GOLGA6L10A6NI86 522 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 CAVIN1Q6NZI2 390 aaKnown RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 ZNF396Q96N95 335 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-201ENST00000258349 BCL2L13Q9BXK5 485 aa5.76□□□□□ -1.49
RC3H1-201ENST00000258349 GNAI1P63096 354 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 CADPSQ9ULU8 1353 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 DHX16O60231 1041 aaKnown RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 DIAPH1O60610 1272 aaKnown RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 TEFQ10587 303 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 ERLIN2O94905 339 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 ZRSR2Q15696 482 aaKnown RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 RIPK4P57078 832 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 RALYLQ86SE5 291 aaKnown RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 CTDP1Q9Y5B0 961 aaPredicted RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 NESP48681 1621 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 PIP4K2AP48426 406 aaPredicted RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 MYH10P35580 1976 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 LTV1Q96GA3 475 aaPredicted RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 ANO8Q9HCE9 1232 aaPredicted RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 BIVM-ERCC5R4GMW8 1640 aa5.75□□□□□ -1.49
RC3H1-201ENST00000258349 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 CCDC9Q9Y3X0 531 aaKnown RBP5.75□□□□□ -1.49
RC3H1-201ENST00000258349 TDRD9Q8NDG6 1382 aaKnown RBP5.74□□□□□ -1.49
RC3H1-201ENST00000258349 PDILTQ8N807 584 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 TRIM5Q9C035 493 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 IQGAP2Q13576 1575 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 TRAK1Q9UPV9 953 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 HSP90AB2PQ58FF8 381 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 SMC2O95347 1197 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 MAGEC2Q9UBF1 373 aaPredicted RBP5.74□□□□□ -1.49
RC3H1-201ENST00000258349 TRAK2O60296 914 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 LUC7LQ9NQ29 371 aaKnown RBP5.74□□□□□ -1.49
RC3H1-201ENST00000258349 KDM5AP29375 1690 aaKnown RBP5.74□□□□□ -1.49
RC3H1-201ENST00000258349 RRP9O43818 475 aaKnown RBP5.74□□□□□ -1.49
RC3H1-201ENST00000258349 TXLNAP40222 546 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 SART3Q15020 963 aaKnown RBP5.74□□□□□ -1.49
RC3H1-201ENST00000258349 FBXW7Q969H0 707 aa5.74□□□□□ -1.49
RC3H1-201ENST00000258349 R3HCC1Q9Y3T6 440 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms