RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ANKRD36BQ8N2N9 1353 aa33.36■■■□□ 2.93
TMEM55B-201ENST00000250489 ZNF521Q96K83 1311 aa33.36■■■□□ 2.93
TMEM55B-201ENST00000250489 SENP3Q9H4L4 574 aaPredicted RBP33.36■■■□□ 2.93
TMEM55B-201ENST00000250489 A2ML1A8K2U0 1454 aa33.35■■■□□ 2.93
TMEM55B-201ENST00000250489 MORC1Q86VD1 984 aa33.35■■■□□ 2.93
TMEM55B-201ENST00000250489 MLECQ14165 292 aa33.34■■■□□ 2.93
TMEM55B-201ENST00000250489 SAFB2Q14151 953 aaKnown RBP eCLIP33.33■■■□□ 2.93
TMEM55B-201ENST00000250489 CABP2Q9NPB3 220 aa33.33■■■□□ 2.93
TMEM55B-201ENST00000250489 CCDC136Q96JN2 1154 aa33.32■■■□□ 2.92
TMEM55B-201ENST00000250489 CGNL1Q0VF96 1302 aa33.32■■■□□ 2.92
TMEM55B-201ENST00000250489 CCDC146Q8IYE0 955 aa33.29■■■□□ 2.92
TMEM55B-201ENST00000250489 NINLQ9Y2I6 1382 aa33.29■■■□□ 2.92
TMEM55B-201ENST00000250489 PRAM1Q96QH2 718 aa33.27■■■□□ 2.92
TMEM55B-201ENST00000250489 NSD2O96028 1365 aa33.27■■■□□ 2.92
TMEM55B-201ENST00000250489 RIMS2Q9UQ26 1411 aa33.26■■■□□ 2.92
TMEM55B-201ENST00000250489 SHPRHQ149N8 1683 aa33.26■■■□□ 2.92
TMEM55B-201ENST00000250489 GOLGA2Q08379 1002 aa33.25■■■□□ 2.91
TMEM55B-201ENST00000250489 DUSP27Q5VZP5 1158 aa33.24■■■□□ 2.91
TMEM55B-201ENST00000250489 POGKQ9P215 609 aa33.23■■■□□ 2.91
TMEM55B-201ENST00000250489 SRPK2P78362 688 aaKnown RBP33.23■■■□□ 2.91
TMEM55B-201ENST00000250489 EXOC6Q8TAG9 804 aa33.23■■■□□ 2.91
TMEM55B-201ENST00000250489 ATAD2Q6PL18 1390 aa33.22■■■□□ 2.91
TMEM55B-201ENST00000250489 MINK1Q8N4C8 1332 aaPredicted RBP33.22■■■□□ 2.91
TMEM55B-201ENST00000250489 APAF1O14727 1248 aa33.22■■■□□ 2.91
TMEM55B-201ENST00000250489 SETD1AO15047 1707 aaKnown RBP33.22■■■□□ 2.91
TMEM55B-201ENST00000250489 TNNT2P45379 298 aaPredicted RBP33.21■■■□□ 2.91
TMEM55B-201ENST00000250489 A0A1W2PP64 1363 aa33.21■■■□□ 2.91
TMEM55B-201ENST00000250489 ZMYM3Q14202 1370 aa33.21■■■□□ 2.91
TMEM55B-201ENST00000250489 DLC1Q96QB1 1528 aa33.2■■■□□ 2.91
TMEM55B-201ENST00000250489 SLFN5Q08AF3 891 aa33.18■■■□□ 2.9
TMEM55B-201ENST00000250489 NGEFQ8N5V2 710 aa33.18■■■□□ 2.9
TMEM55B-201ENST00000250489 ABCC11Q96J66 1382 aa33.18■■■□□ 2.9
TMEM55B-201ENST00000250489 ESF1Q9H501 851 aaKnown RBP33.18■■■□□ 2.9
TMEM55B-201ENST00000250489 TRMT2AQ8IZ69 625 aaKnown RBP33.16■■■□□ 2.9
TMEM55B-201ENST00000250489 MTHFSP49914 203 aa33.14■■■□□ 2.9
TMEM55B-201ENST00000250489 CD163L1Q9NR16 1453 aa33.14■■■□□ 2.9
TMEM55B-201ENST00000250489 NRXN3Q9Y4C0 1643 aa33.13■■■□□ 2.89
TMEM55B-201ENST00000250489 PLIN1O60240 522 aa33.13■■■□□ 2.89
TMEM55B-201ENST00000250489 CFAP53Q96M91 514 aa33.1■■■□□ 2.89
TMEM55B-201ENST00000250489 TERF2IPQ9NYB0 399 aa33.1■■■□□ 2.89
TMEM55B-201ENST00000250489 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.09■■■□□ 2.89
TMEM55B-201ENST00000250489 CDK19Q9BWU1 502 aa33.09■■■□□ 2.89
TMEM55B-201ENST00000250489 SPINK5Q9NQ38 1064 aaPredicted RBP33.07■■■□□ 2.88
TMEM55B-201ENST00000250489 ANKRD26Q9UPS8 1709 aa33.07■■■□□ 2.88
TMEM55B-201ENST00000250489 TNRQ92752 1358 aa33.06■■■□□ 2.88
TMEM55B-201ENST00000250489 MED14O60244 1454 aa33.06■■■□□ 2.88
TMEM55B-201ENST00000250489 IQSEC2Q5JU85 1478 aa33.06■■■□□ 2.88
TMEM55B-201ENST00000250489 E9PSI1 815 aa33.05■■■□□ 2.88
TMEM55B-201ENST00000250489 RUNDC1Q96C34 613 aa33.05■■■□□ 2.88
TMEM55B-201ENST00000250489 NKTRP30414 1462 aaKnown RBP33.05■■■□□ 2.88
TMEM55B-201ENST00000250489 NLRP1Q9C000 1473 aa33.04■■■□□ 2.88
TMEM55B-201ENST00000250489 CRBNQ96SW2 442 aa33.03■■■□□ 2.88
TMEM55B-201ENST00000250489 WAPLQ7Z5K2 1190 aa33.02■■■□□ 2.88
TMEM55B-201ENST00000250489 HDGFL2Q7Z4V5 671 aaPredicted RBP33.01■■■□□ 2.87
TMEM55B-201ENST00000250489 GGNBP2Q9H3C7 697 aa33.01■■■□□ 2.87
TMEM55B-201ENST00000250489 DMRT2Q9Y5R5 561 aa33.01■■■□□ 2.87
TMEM55B-201ENST00000250489 WWC1Q8IX03 1113 aa33■■■□□ 2.87
TMEM55B-201ENST00000250489 FYB1O15117 783 aa33■■■□□ 2.87
TMEM55B-201ENST00000250489 METP08581 1390 aa32.99■■■□□ 2.87
TMEM55B-201ENST00000250489 FANCIQ9NVI1 1328 aa32.99■■■□□ 2.87
TMEM55B-201ENST00000250489 UBR1Q8IWV7 1749 aa32.99■■■□□ 2.87
TMEM55B-201ENST00000250489 CABP1Q9NZU7 370 aa32.98■■■□□ 2.87
TMEM55B-201ENST00000250489 C20orf194Q5TEA3 1177 aa32.98■■■□□ 2.87
TMEM55B-201ENST00000250489 HDGFP51858 240 aaKnown RBP32.97■■■□□ 2.87
TMEM55B-201ENST00000250489 KNDC1Q76NI1 1749 aa32.97■■■□□ 2.87
TMEM55B-201ENST00000250489 TCP11L2Q8N4U5 519 aa32.96■■■□□ 2.87
TMEM55B-201ENST00000250489 ATP7BP35670 1465 aa32.95■■■□□ 2.87
TMEM55B-201ENST00000250489 KIF20BQ96Q89 1820 aa32.95■■■□□ 2.87
TMEM55B-201ENST00000250489 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.94■■■□□ 2.86
TMEM55B-201ENST00000250489 PHF23Q9BUL5 403 aaPredicted RBP32.94■■■□□ 2.86
TMEM55B-201ENST00000250489 TMEM2Q9UHN6 1383 aa32.94■■■□□ 2.86
TMEM55B-201ENST00000250489 COL3A1P02461 1466 aaPredicted RBP32.94■■■□□ 2.86
TMEM55B-201ENST00000250489 TECPR2O15040 1411 aa32.92■■■□□ 2.86
TMEM55B-201ENST00000250489 DNAJC5Q9H3Z4 198 aa32.91■■■□□ 2.86
TMEM55B-201ENST00000250489 RRP7AQ9Y3A4 280 aaKnown RBP32.9■■■□□ 2.86
TMEM55B-201ENST00000250489 FAM135BQ49AJ0 1406 aa32.9■■■□□ 2.86
TMEM55B-201ENST00000250489 ADGRB2O60241 1585 aa32.9■■■□□ 2.86
TMEM55B-201ENST00000250489 U2AF1L5P0DN76 240 aaPredicted RBP32.89■■■□□ 2.86
TMEM55B-201ENST00000250489 U2AF1Q01081 240 aaKnown RBP eCLIP32.89■■■□□ 2.86
TMEM55B-201ENST00000250489 NCBP3Q53F19 620 aaKnown RBP32.89■■■□□ 2.86
TMEM55B-201ENST00000250489 CPS1P31327 1500 aa32.89■■■□□ 2.86
TMEM55B-201ENST00000250489 CCDC27Q2M243 656 aa32.89■■■□□ 2.85
TMEM55B-201ENST00000250489 SIRT1Q96EB6 747 aa32.89■■■□□ 2.85
TMEM55B-201ENST00000250489 NEUROD2Q15784 382 aa32.88■■■□□ 2.85
TMEM55B-201ENST00000250489 WASLO00401 505 aaPredicted RBP32.87■■■□□ 2.85
TMEM55B-201ENST00000250489 TXNDC2Q86VQ3 553 aa32.86■■■□□ 2.85
TMEM55B-201ENST00000250489 WDR63Q8IWG1 891 aa32.85■■■□□ 2.85
TMEM55B-201ENST00000250489 CPSF1Q10570 1443 aaKnown RBP32.82■■■□□ 2.84
TMEM55B-201ENST00000250489 BCAR3O75815 825 aa32.81■■■□□ 2.84
TMEM55B-201ENST00000250489 ADAMTS13Q76LX8 1427 aa32.81■■■□□ 2.84
TMEM55B-201ENST00000250489 PPIP5K1Q6PFW1 1433 aa32.81■■■□□ 2.84
TMEM55B-201ENST00000250489 PNPLA6Q8IY17 1366 aa32.8■■■□□ 2.84
TMEM55B-201ENST00000250489 TCERG1O14776 1098 aaKnown RBP32.78■■■□□ 2.84
TMEM55B-201ENST00000250489 U2SURPO15042 1029 aaKnown RBP32.78■■■□□ 2.84
TMEM55B-201ENST00000250489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.78■■■□□ 2.84
TMEM55B-201ENST00000250489 PLEKHF1Q96S99 279 aa32.78■■■□□ 2.84
TMEM55B-201ENST00000250489 EDC4Q6P2E9 1401 aaKnown RBP32.77■■■□□ 2.84
TMEM55B-201ENST00000250489 PLEKHG1Q9ULL1 1385 aa32.77■■■□□ 2.84
TMEM55B-201ENST00000250489 MSH5O43196 834 aa32.76■■■□□ 2.84
TMEM55B-201ENST00000250489 CDC42BPGQ6DT37 1551 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms