RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 A2MP01023 1474 aa14.47□□□□□ -0.09
SOX9-201ENST00000245479 NOL8Q76FK4 1167 aaKnown RBP14.47□□□□□ -0.09
SOX9-201ENST00000245479 FOXD4L5Q5VV16 416 aaPredicted RBP14.47□□□□□ -0.09
SOX9-201ENST00000245479 FOXD4L4Q8WXT5 416 aaPredicted RBP14.47□□□□□ -0.09
SOX9-201ENST00000245479 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.1
SOX9-201ENST00000245479 PARD3Q8TEW0 1356 aa14.46□□□□□ -0.1
SOX9-201ENST00000245479 RALGAPBQ86X10 1494 aa14.46□□□□□ -0.1
SOX9-201ENST00000245479 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
SOX9-201ENST00000245479 MIS18AQ9NYP9 233 aa14.45□□□□□ -0.1
SOX9-201ENST00000245479 BCORL1Q5H9F3 1711 aa14.45□□□□□ -0.1
SOX9-201ENST00000245479 PRKAR2BP31323 418 aa14.45□□□□□ -0.1
SOX9-201ENST00000245479 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
SOX9-201ENST00000245479 PMFBP1Q8TBY8 1022 aa14.45□□□□□ -0.1
SOX9-201ENST00000245479 NOS1P29475 1434 aa14.45□□□□□ -0.1
SOX9-201ENST00000245479 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
SOX9-201ENST00000245479 FOXD4L6Q3SYB3 417 aaPredicted RBP14.44□□□□□ -0.1
SOX9-201ENST00000245479 FOXD4L3Q6VB84 417 aaPredicted RBP14.44□□□□□ -0.1
SOX9-201ENST00000245479 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
SOX9-201ENST00000245479 SLC26A8Q96RN1 970 aa14.43□□□□□ -0.1
SOX9-201ENST00000245479 RWDD1Q9H446 243 aaPredicted RBP14.43□□□□□ -0.1
SOX9-201ENST00000245479 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
SOX9-201ENST00000245479 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
SOX9-201ENST00000245479 DIAPH1O60610 1272 aaKnown RBP14.43□□□□□ -0.1
SOX9-201ENST00000245479 ZKSCAN2Q63HK3 967 aa14.43□□□□□ -0.1
SOX9-201ENST00000245479 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
SOX9-201ENST00000245479 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
SOX9-201ENST00000245479 CDK19Q9BWU1 502 aa14.42□□□□□ -0.1
SOX9-201ENST00000245479 FAM13BQ9NYF5 915 aa14.42□□□□□ -0.1
SOX9-201ENST00000245479 DDX11L8A8MPP1 907 aa14.42□□□□□ -0.1
SOX9-201ENST00000245479 PLCB2Q00722 1185 aa14.42□□□□□ -0.1
SOX9-201ENST00000245479 MBD5Q9P267 1494 aa14.42□□□□□ -0.1
SOX9-201ENST00000245479 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
SOX9-201ENST00000245479 EMILIN1Q9Y6C2 1016 aa14.41□□□□□ -0.1
SOX9-201ENST00000245479 FAM83GA6ND36 823 aa14.41□□□□□ -0.1
SOX9-201ENST00000245479 ZMYND15Q9H091 742 aa14.41□□□□□ -0.1
SOX9-201ENST00000245479 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
SOX9-201ENST00000245479 NUP160Q12769 1436 aa14.4□□□□□ -0.1
SOX9-201ENST00000245479 CEBPAP49715 358 aaPredicted RBP14.4□□□□□ -0.1
SOX9-201ENST00000245479 RRP9O43818 475 aaKnown RBP14.39□□□□□ -0.11
SOX9-201ENST00000245479 MRE11P49959 708 aa14.39□□□□□ -0.11
SOX9-201ENST00000245479 RARSP54136 660 aaKnown RBP14.39□□□□□ -0.11
SOX9-201ENST00000245479 SSH1Q8WYL5 1049 aa14.39□□□□□ -0.11
SOX9-201ENST00000245479 CHMP5Q9NZZ3 219 aa14.39□□□□□ -0.11
SOX9-201ENST00000245479 UGGT1Q9NYU2 1555 aa14.39□□□□□ -0.11
SOX9-201ENST00000245479 LRPPRCP42704 1394 aaKnown RBP14.39□□□□□ -0.11
SOX9-201ENST00000245479 NME9Q86XW9 330 aa14.38□□□□□ -0.11
SOX9-201ENST00000245479 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
SOX9-201ENST00000245479 GCC2Q8IWJ2 1684 aa14.38□□□□□ -0.11
SOX9-201ENST00000245479 FANCAO15360 1455 aa14.37□□□□□ -0.11
SOX9-201ENST00000245479 TRAK2O60296 914 aa14.37□□□□□ -0.11
SOX9-201ENST00000245479 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
SOX9-201ENST00000245479 A0A0G2JS52 829 aa14.37□□□□□ -0.11
SOX9-201ENST00000245479 ABCC10Q5T3U5 1492 aa14.36□□□□□ -0.11
SOX9-201ENST00000245479 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
SOX9-201ENST00000245479 TMEM57Q8N5G2 664 aa14.36□□□□□ -0.11
SOX9-201ENST00000245479 PODXL2Q9NZ53 605 aa14.36□□□□□ -0.11
SOX9-201ENST00000245479 KRT24Q2M2I5 525 aa14.36□□□□□ -0.11
SOX9-201ENST00000245479 ARHGEF12Q9NZN5 1544 aa14.35□□□□□ -0.11
SOX9-201ENST00000245479 PLCH2O75038 1416 aa14.35□□□□□ -0.11
SOX9-201ENST00000245479 PTMSP20962 102 aa14.35□□□□□ -0.11
SOX9-201ENST00000245479 NGDNQ8NEJ9 315 aaKnown RBP14.35□□□□□ -0.11
SOX9-201ENST00000245479 DDX49Q9Y6V7 483 aaKnown RBP14.35□□□□□ -0.11
SOX9-201ENST00000245479 TMPOP42166 694 aaKnown RBP14.35□□□□□ -0.11
SOX9-201ENST00000245479 CALD1Q05682 793 aaKnown RBP14.35□□□□□ -0.11
SOX9-201ENST00000245479 ESPNB1AK53 854 aa14.33□□□□□ -0.12
SOX9-201ENST00000245479 C8orf34Q49A92 452 aa14.33□□□□□ -0.12
SOX9-201ENST00000245479 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
SOX9-201ENST00000245479 RBM10P98175 930 aaKnown RBP14.32□□□□□ -0.12
SOX9-201ENST00000245479 MCM10Q7L590 875 aa14.32□□□□□ -0.12
SOX9-201ENST00000245479 TRIM27P14373 513 aa14.32□□□□□ -0.12
SOX9-201ENST00000245479 COG3Q96JB2 828 aa14.32□□□□□ -0.12
SOX9-201ENST00000245479 CD109Q6YHK3 1445 aa14.32□□□□□ -0.12
SOX9-201ENST00000245479 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
SOX9-201ENST00000245479 UHRF1BP1Q6BDS2 1440 aa14.31□□□□□ -0.12
SOX9-201ENST00000245479 FYB1O15117 783 aa14.31□□□□□ -0.12
SOX9-201ENST00000245479 PHACTR3Q96KR7 559 aa14.31□□□□□ -0.12
SOX9-201ENST00000245479 ADGRL2O95490 1459 aa14.31□□□□□ -0.12
SOX9-201ENST00000245479 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
SOX9-201ENST00000245479 C14orf93Q9H972 538 aaKnown RBP14.31□□□□□ -0.12
SOX9-201ENST00000245479 CCDC9Q9Y3X0 531 aaKnown RBP14.31□□□□□ -0.12
SOX9-201ENST00000245479 IPO8O15397 1037 aaKnown RBP14.3□□□□□ -0.12
SOX9-201ENST00000245479 EIF2S2P20042 333 aaKnown RBP14.3□□□□□ -0.12
SOX9-201ENST00000245479 XPCQ01831 940 aaPredicted RBP14.3□□□□□ -0.12
SOX9-201ENST00000245479 TSPYL6Q8N831 410 aa14.3□□□□□ -0.12
SOX9-201ENST00000245479 KDM5CP41229 1560 aa14.3□□□□□ -0.12
SOX9-201ENST00000245479 AMPHP49418 695 aa14.3□□□□□ -0.12
SOX9-201ENST00000245479 R3HCC1Q9Y3T6 440 aaKnown RBP14.3□□□□□ -0.12
SOX9-201ENST00000245479 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
SOX9-201ENST00000245479 TPM2P07951 284 aa14.29□□□□□ -0.12
SOX9-201ENST00000245479 MCM4P33991 863 aa14.29□□□□□ -0.12
SOX9-201ENST00000245479 SAMD9LQ8IVG5 1584 aa14.29□□□□□ -0.12
SOX9-201ENST00000245479 ITSN2Q9NZM3 1697 aa14.29□□□□□ -0.12
SOX9-201ENST00000245479 KIAA2012Q0VF49 1180 aa14.29□□□□□ -0.12
SOX9-201ENST00000245479 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.29□□□□□ -0.12
SOX9-201ENST00000245479 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
SOX9-201ENST00000245479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.29□□□□□ -0.12
SOX9-201ENST00000245479 ATAD2Q6PL18 1390 aa14.28□□□□□ -0.12
SOX9-201ENST00000245479 DTNBO60941 627 aa14.28□□□□□ -0.12
SOX9-201ENST00000245479 CHAF1AQ13111 956 aaPredicted RBP14.28□□□□□ -0.12
SOX9-201ENST00000245479 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms