RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TPM3P06753 285 aa24.12■■□□□ 1.45
SOX4-201ENST00000244745 C1orf115Q9H7X2 142 aa24.12■■□□□ 1.45
SOX4-201ENST00000244745 C9orf84Q5VXU9 1444 aa24.12■■□□□ 1.45
SOX4-201ENST00000244745 PDE3AQ14432 1141 aa24.12■■□□□ 1.45
SOX4-201ENST00000244745 CCAR2Q8N163 923 aaKnown RBP24.12■■□□□ 1.45
SOX4-201ENST00000244745 MAP7D2Q96T17 732 aa24.12■■□□□ 1.45
SOX4-201ENST00000244745 DAPK1P53355 1430 aa24.11■■□□□ 1.45
SOX4-201ENST00000244745 NOB1Q9ULX3 412 aaKnown RBP24.11■■□□□ 1.45
SOX4-201ENST00000244745 TPD52L1Q16890 204 aaPredicted RBP24.1■■□□□ 1.45
SOX4-201ENST00000244745 ERBINQ96RT1 1412 aa24.1■■□□□ 1.45
SOX4-201ENST00000244745 TSR2Q969E8 191 aaKnown RBP24.1■■□□□ 1.45
SOX4-201ENST00000244745 NEXNQ0ZGT2 675 aa24.1■■□□□ 1.45
SOX4-201ENST00000244745 PES1O00541 588 aaKnown RBP24.09■■□□□ 1.45
SOX4-201ENST00000244745 FOSBP53539 338 aa24.09■■□□□ 1.45
SOX4-201ENST00000244745 RBM10P98175 930 aaKnown RBP24.09■■□□□ 1.45
SOX4-201ENST00000244745 SETQ01105 290 aaPredicted RBP24.08■■□□□ 1.45
SOX4-201ENST00000244745 MTERF4Q7Z6M4 381 aaKnown RBP24.08■■□□□ 1.45
SOX4-201ENST00000244745 CAVIN1Q6NZI2 390 aaKnown RBP24.08■■□□□ 1.45
SOX4-201ENST00000244745 FBXW7Q969H0 707 aa24.08■■□□□ 1.44
SOX4-201ENST00000244745 PCF11O94913 1555 aaKnown RBP24.08■■□□□ 1.44
SOX4-201ENST00000244745 A0A0U1RQG5 324 aaPredicted RBP24.07■■□□□ 1.44
SOX4-201ENST00000244745 CHMP4CQ96CF2 233 aa24.07■■□□□ 1.44
SOX4-201ENST00000244745 RNF214Q8ND24 703 aa24.07■■□□□ 1.44
SOX4-201ENST00000244745 RNF20Q5VTR2 975 aa24.06■■□□□ 1.44
SOX4-201ENST00000244745 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
SOX4-201ENST00000244745 G3BP1Q13283 466 aaKnown RBP eCLIP24.06■■□□□ 1.44
SOX4-201ENST00000244745 PRG4Q92954 1404 aaPredicted RBP24.05■■□□□ 1.44
SOX4-201ENST00000244745 CCDC173Q0VFZ6 552 aa24.05■■□□□ 1.44
SOX4-201ENST00000244745 TEX35Q5T0J7 233 aa24.05■■□□□ 1.44
SOX4-201ENST00000244745 NAIPQ13075 1403 aa24.04■■□□□ 1.44
SOX4-201ENST00000244745 SCAPERQ9BY12 1400 aa24.04■■□□□ 1.44
SOX4-201ENST00000244745 GPS2Q13227 327 aa24.04■■□□□ 1.44
SOX4-201ENST00000244745 SASS6Q6UVJ0 657 aa24.04■■□□□ 1.44
SOX4-201ENST00000244745 TTC5Q8N0Z6 440 aa24.04■■□□□ 1.44
SOX4-201ENST00000244745 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
SOX4-201ENST00000244745 ERC2O15083 957 aa24.02■■□□□ 1.44
SOX4-201ENST00000244745 IFT57Q9NWB7 429 aa24.02■■□□□ 1.44
SOX4-201ENST00000244745 PRPF40AO75400 957 aaKnown RBP24.01■■□□□ 1.43
SOX4-201ENST00000244745 AKAP17AQ02040 695 aaKnown RBP24.01■■□□□ 1.43
SOX4-201ENST00000244745 AFAP1Q8N556 730 aa24.01■■□□□ 1.43
SOX4-201ENST00000244745 NINLQ9Y2I6 1382 aa24.01■■□□□ 1.43
SOX4-201ENST00000244745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.43
SOX4-201ENST00000244745 DDX58O95786 925 aaKnown RBP24■■□□□ 1.43
SOX4-201ENST00000244745 UBTFL1P0CB47 393 aaPredicted RBP24■■□□□ 1.43
SOX4-201ENST00000244745 SYNE3Q6ZMZ3 975 aa24■■□□□ 1.43
SOX4-201ENST00000244745 SYNJ2O15056 1496 aa24■■□□□ 1.43
SOX4-201ENST00000244745 CCDC27Q2M243 656 aa24■■□□□ 1.43
SOX4-201ENST00000244745 C11orf95C9JLR9 678 aaPredicted RBP24■■□□□ 1.43
SOX4-201ENST00000244745 TRIM29Q14134 588 aa24■■□□□ 1.43
SOX4-201ENST00000244745 BCL11BQ9C0K0 894 aaPredicted RBP24■■□□□ 1.43
SOX4-201ENST00000244745 HSP90AB4PQ58FF6 505 aa23.99■■□□□ 1.43
SOX4-201ENST00000244745 GCC1Q96CN9 775 aa23.99■■□□□ 1.43
SOX4-201ENST00000244745 SLC12A5Q9H2X9 1139 aa23.99■■□□□ 1.43
SOX4-201ENST00000244745 CPLX1O14810 134 aa23.99■■□□□ 1.43
SOX4-201ENST00000244745 CDK13Q14004 1512 aaKnown RBP23.98■■□□□ 1.43
SOX4-201ENST00000244745 TWISTNBQ3B726 338 aaPredicted RBP23.98■■□□□ 1.43
SOX4-201ENST00000244745 PDE4CQ08493 712 aa23.98■■□□□ 1.43
SOX4-201ENST00000244745 LRRFIP1Q32MZ4 808 aaKnown RBP23.98■■□□□ 1.43
SOX4-201ENST00000244745 HOMER1Q86YM7 354 aa23.98■■□□□ 1.43
SOX4-201ENST00000244745 RABEP1Q15276 862 aa23.97■■□□□ 1.43
SOX4-201ENST00000244745 TSR1Q2NL82 804 aaKnown RBP23.97■■□□□ 1.43
SOX4-201ENST00000244745 NEK4P51957 841 aa23.97■■□□□ 1.43
SOX4-201ENST00000244745 MVPQ14764 893 aaKnown RBP23.97■■□□□ 1.43
SOX4-201ENST00000244745 GRPEL1Q9HAV7 217 aa23.97■■□□□ 1.43
SOX4-201ENST00000244745 NESP48681 1621 aa23.97■■□□□ 1.43
SOX4-201ENST00000244745 APPP05067 770 aa23.97■■□□□ 1.43
SOX4-201ENST00000244745 TPM1P09493 284 aa23.97■■□□□ 1.43
SOX4-201ENST00000244745 SKAP1Q86WV1 359 aa23.97■■□□□ 1.43
SOX4-201ENST00000244745 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.96■■□□□ 1.43
SOX4-201ENST00000244745 CNTROBQ8N137 903 aa23.95■■□□□ 1.43
SOX4-201ENST00000244745 TSPY26PQ9H489 355 aa23.95■■□□□ 1.43
SOX4-201ENST00000244745 PTPN23Q9H3S7 1636 aa23.95■■□□□ 1.43
SOX4-201ENST00000244745 WDR63Q8IWG1 891 aa23.95■■□□□ 1.42
SOX4-201ENST00000244745 CPLX2Q6PUV4 134 aaKnown RBP23.95■■□□□ 1.42
SOX4-201ENST00000244745 MARCH6O60337 910 aa23.95■■□□□ 1.42
SOX4-201ENST00000244745 TOPBP1Q92547 1522 aa23.95■■□□□ 1.42
SOX4-201ENST00000244745 TROQ12816 1431 aaPredicted RBP23.94■■□□□ 1.42
SOX4-201ENST00000244745 NUTM2GQ5VZR2 741 aa23.94■■□□□ 1.42
SOX4-201ENST00000244745 AIMP1Q12904 312 aaKnown RBP23.94■■□□□ 1.42
SOX4-201ENST00000244745 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
SOX4-201ENST00000244745 GTF2E1P29083 439 aaPredicted RBP23.93■■□□□ 1.42
SOX4-201ENST00000244745 CCDC73Q6ZRK6 1079 aa23.93■■□□□ 1.42
SOX4-201ENST00000244745 SLFN5Q08AF3 891 aa23.92■■□□□ 1.42
SOX4-201ENST00000244745 RRP9O43818 475 aaKnown RBP23.92■■□□□ 1.42
SOX4-201ENST00000244745 PSME1Q06323 249 aa23.92■■□□□ 1.42
SOX4-201ENST00000244745 K7ELQ4 463 aaPredicted RBP23.92■■□□□ 1.42
SOX4-201ENST00000244745 NFXL1Q6ZNB6 911 aa23.91■■□□□ 1.42
SOX4-201ENST00000244745 PRAM1Q96QH2 718 aa23.91■■□□□ 1.42
SOX4-201ENST00000244745 RIC3Q7Z5B4 369 aa23.9■■□□□ 1.42
SOX4-201ENST00000244745 MBD3O95983 291 aa23.9■■□□□ 1.42
SOX4-201ENST00000244745 ATF7IPQ6VMQ6 1270 aa23.9■■□□□ 1.42
SOX4-201ENST00000244745 C20orf194Q5TEA3 1177 aa23.9■■□□□ 1.42
SOX4-201ENST00000244745 VPS53Q5VIR6 699 aa23.9■■□□□ 1.42
SOX4-201ENST00000244745 CHD1LQ86WJ1 897 aa23.9■■□□□ 1.42
SOX4-201ENST00000244745 SURF6O75683 361 aaKnown RBP23.89■■□□□ 1.42
SOX4-201ENST00000244745 TRDNQ13061 729 aa23.89■■□□□ 1.41
SOX4-201ENST00000244745 CCDC30Q5VVM6 783 aa23.89■■□□□ 1.41
SOX4-201ENST00000244745 ARGLU1Q9NWB6 273 aaPredicted RBP23.89■■□□□ 1.41
SOX4-201ENST00000244745 EPRSP07814 1512 aaKnown RBP23.89■■□□□ 1.41
SOX4-201ENST00000244745 LETM1O95202 739 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms