RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 CABP2Q9NPB3 220 aa24.4■■□□□ 1.5
KLHDC3-201ENST00000244670 PLEKHH1Q9ULM0 1364 aa24.39■■□□□ 1.5
KLHDC3-201ENST00000244670 ABCC11Q96J66 1382 aa24.39■■□□□ 1.49
KLHDC3-201ENST00000244670 SLC12A5Q9H2X9 1139 aa24.37■■□□□ 1.49
KLHDC3-201ENST00000244670 SRPK2P78362 688 aaKnown RBP24.36■■□□□ 1.49
KLHDC3-201ENST00000244670 SLC26A8Q96RN1 970 aa24.36■■□□□ 1.49
KLHDC3-201ENST00000244670 KNDC1Q76NI1 1749 aa24.36■■□□□ 1.49
KLHDC3-201ENST00000244670 AMER1Q5JTC6 1135 aaPredicted RBP24.35■■□□□ 1.49
KLHDC3-201ENST00000244670 CARD14Q9BXL6 1004 aa24.35■■□□□ 1.49
KLHDC3-201ENST00000244670 ZNF142P52746 1687 aaPredicted RBP24.34■■□□□ 1.49
KLHDC3-201ENST00000244670 HNRNPUQ00839 825 aaKnown RBP eCLIP24.33■■□□□ 1.49
KLHDC3-201ENST00000244670 PUS7Q96PZ0 661 aaKnown RBP24.32■■□□□ 1.48
KLHDC3-201ENST00000244670 SETD1BQ9UPS6 1966 aaKnown RBP24.32■■□□□ 1.48
KLHDC3-201ENST00000244670 CPS1P31327 1500 aa24.32■■□□□ 1.48
KLHDC3-201ENST00000244670 MED14O60244 1454 aa24.32■■□□□ 1.48
KLHDC3-201ENST00000244670 TECPR2O15040 1411 aa24.31■■□□□ 1.48
KLHDC3-201ENST00000244670 BRD4O60885 1362 aaPredicted RBP24.31■■□□□ 1.48
KLHDC3-201ENST00000244670 CDK19Q9BWU1 502 aa24.3■■□□□ 1.48
KLHDC3-201ENST00000244670 NLRP13Q86W25 1043 aa24.29■■□□□ 1.48
KLHDC3-201ENST00000244670 NSD3Q9BZ95 1437 aa24.29■■□□□ 1.48
KLHDC3-201ENST00000244670 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
KLHDC3-201ENST00000244670 PTPRUQ92729 1446 aa24.27■■□□□ 1.48
KLHDC3-201ENST00000244670 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
KLHDC3-201ENST00000244670 ATAD2Q6PL18 1390 aa24.26■■□□□ 1.47
KLHDC3-201ENST00000244670 NPC1L1Q9UHC9 1359 aa24.25■■□□□ 1.47
KLHDC3-201ENST00000244670 PNISRQ8TF01 805 aaKnown RBP24.25■■□□□ 1.47
KLHDC3-201ENST00000244670 TBX22Q9Y458 520 aa24.24■■□□□ 1.47
KLHDC3-201ENST00000244670 ANKRD36BQ8N2N9 1353 aa24.24■■□□□ 1.47
KLHDC3-201ENST00000244670 DIP2AQ14689 1571 aa24.24■■□□□ 1.47
KLHDC3-201ENST00000244670 SIRT1Q96EB6 747 aa24.23■■□□□ 1.47
KLHDC3-201ENST00000244670 PPP2R1AP30153 589 aa24.22■■□□□ 1.47
KLHDC3-201ENST00000244670 A0A1W2PP64 1363 aa24.21■■□□□ 1.47
KLHDC3-201ENST00000244670 NINLQ9Y2I6 1382 aa24.21■■□□□ 1.47
KLHDC3-201ENST00000244670 ANKLE2Q86XL3 938 aa24.21■■□□□ 1.47
KLHDC3-201ENST00000244670 AMOTL2Q9Y2J4 779 aa24.21■■□□□ 1.47
KLHDC3-201ENST00000244670 WASLO00401 505 aaPredicted RBP24.2■■□□□ 1.46
KLHDC3-201ENST00000244670 USP32Q8NFA0 1604 aa24.19■■□□□ 1.46
KLHDC3-201ENST00000244670 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.19■■□□□ 1.46
KLHDC3-201ENST00000244670 CABP1Q9NZU7 370 aa24.18■■□□□ 1.46
KLHDC3-201ENST00000244670 CD163L1Q9NR16 1453 aa24.17■■□□□ 1.46
KLHDC3-201ENST00000244670 CGNL1Q0VF96 1302 aa24.16■■□□□ 1.46
KLHDC3-201ENST00000244670 XRN1Q8IZH2 1706 aaKnown RBP24.14■■□□□ 1.46
KLHDC3-201ENST00000244670 ZBED9Q6R2W3 1325 aa24.14■■□□□ 1.46
KLHDC3-201ENST00000244670 TERF2IPQ9NYB0 399 aa24.14■■□□□ 1.46
KLHDC3-201ENST00000244670 SENP3-EIF4A1A0A087X0R7 540 aa24.14■■□□□ 1.45
KLHDC3-201ENST00000244670 PTCH1Q13635 1447 aa24.13■■□□□ 1.45
KLHDC3-201ENST00000244670 ADGRB2O60241 1585 aa24.12■■□□□ 1.45
KLHDC3-201ENST00000244670 MORC1Q86VD1 984 aa24.12■■□□□ 1.45
KLHDC3-201ENST00000244670 HDGFL2Q7Z4V5 671 aaPredicted RBP24.12■■□□□ 1.45
KLHDC3-201ENST00000244670 PPIP5K1Q6PFW1 1433 aa24.11■■□□□ 1.45
KLHDC3-201ENST00000244670 NCKAP5LQ9HCH0 1330 aa24.11■■□□□ 1.45
KLHDC3-201ENST00000244670 TNNT2P45379 298 aaPredicted RBP24.11■■□□□ 1.45
KLHDC3-201ENST00000244670 NUDT16Q96DE0 195 aaKnown RBP24.11■■□□□ 1.45
KLHDC3-201ENST00000244670 KCNA6P17658 529 aa24.1■■□□□ 1.45
KLHDC3-201ENST00000244670 SUPT16HQ9Y5B9 1047 aaKnown RBP24.1■■□□□ 1.45
KLHDC3-201ENST00000244670 PIK3R4Q99570 1358 aa24.08■■□□□ 1.45
KLHDC3-201ENST00000244670 ATP7BP35670 1465 aa24.08■■□□□ 1.45
KLHDC3-201ENST00000244670 PRR36Q9H6K5 1346 aa24.07■■□□□ 1.44
KLHDC3-201ENST00000244670 NPHP4O75161 1426 aaPredicted RBP24.07■■□□□ 1.44
KLHDC3-201ENST00000244670 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
KLHDC3-201ENST00000244670 NUTM2FA1L443 756 aa24.07■■□□□ 1.44
KLHDC3-201ENST00000244670 NSD2O96028 1365 aa24.06■■□□□ 1.44
KLHDC3-201ENST00000244670 GGNBP2Q9H3C7 697 aa24.05■■□□□ 1.44
KLHDC3-201ENST00000244670 CCDC61Q9Y6R9 512 aa24.04■■□□□ 1.44
KLHDC3-201ENST00000244670 KIF20BQ96Q89 1820 aa24.04■■□□□ 1.44
KLHDC3-201ENST00000244670 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
KLHDC3-201ENST00000244670 ANKRD26Q9UPS8 1709 aa24.02■■□□□ 1.44
KLHDC3-201ENST00000244670 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
KLHDC3-201ENST00000244670 FYB1O15117 783 aa24.02■■□□□ 1.44
KLHDC3-201ENST00000244670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.02■■□□□ 1.44
KLHDC3-201ENST00000244670 TOPAZ1Q8N9V7 1692 aa24.01■■□□□ 1.43
KLHDC3-201ENST00000244670 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
KLHDC3-201ENST00000244670 WDR43Q15061 677 aaKnown RBP eCLIP24■■□□□ 1.43
KLHDC3-201ENST00000244670 KDM4FA0A1W2PPD8 638 aa24■■□□□ 1.43
KLHDC3-201ENST00000244670 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
KLHDC3-201ENST00000244670 AKAP12Q02952 1782 aa23.99■■□□□ 1.43
KLHDC3-201ENST00000244670 MON2Q7Z3U7 1717 aa23.98■■□□□ 1.43
KLHDC3-201ENST00000244670 BLMP54132 1417 aaPredicted RBP23.98■■□□□ 1.43
KLHDC3-201ENST00000244670 RBM33Q96EV2 1170 aaKnown RBP23.98■■□□□ 1.43
KLHDC3-201ENST00000244670 RGPD8O14715 1765 aaPredicted RBP23.97■■□□□ 1.43
KLHDC3-201ENST00000244670 FKBP8Q14318 412 aa23.96■■□□□ 1.43
KLHDC3-201ENST00000244670 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
KLHDC3-201ENST00000244670 EDC4Q6P2E9 1401 aaKnown RBP23.96■■□□□ 1.43
KLHDC3-201ENST00000244670 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
KLHDC3-201ENST00000244670 POLR3AO14802 1390 aaPredicted RBP23.95■■□□□ 1.42
KLHDC3-201ENST00000244670 MTHFSP49914 203 aa23.95■■□□□ 1.42
KLHDC3-201ENST00000244670 NALCNQ8IZF0 1738 aa23.95■■□□□ 1.42
KLHDC3-201ENST00000244670 HSPA2P54652 639 aa23.94■■□□□ 1.42
KLHDC3-201ENST00000244670 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
KLHDC3-201ENST00000244670 ACEP12821 1306 aa23.93■■□□□ 1.42
KLHDC3-201ENST00000244670 INSRP06213 1382 aa23.92■■□□□ 1.42
KLHDC3-201ENST00000244670 NME9Q86XW9 330 aa23.92■■□□□ 1.42
KLHDC3-201ENST00000244670 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
KLHDC3-201ENST00000244670 FMN2Q9NZ56 1722 aa23.91■■□□□ 1.42
KLHDC3-201ENST00000244670 PLEKHG3A1L390 1219 aa23.9■■□□□ 1.42
KLHDC3-201ENST00000244670 NEFLP07196 543 aa23.9■■□□□ 1.42
KLHDC3-201ENST00000244670 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
KLHDC3-201ENST00000244670 SMG6Q86US8 1419 aaKnown RBP23.9■■□□□ 1.42
KLHDC3-201ENST00000244670 ZNF692Q9BU19 519 aaPredicted RBP23.9■■□□□ 1.42
KLHDC3-201ENST00000244670 ZRANB1Q9UGI0 708 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms