RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 KIF14Q15058 1648 aa18.68■□□□□ 0.58
HOXC12-201ENST00000243103 NUTM2FA1L443 756 aa18.68■□□□□ 0.58
HOXC12-201ENST00000243103 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
HOXC12-201ENST00000243103 DTNBO60941 627 aa18.67■□□□□ 0.58
HOXC12-201ENST00000243103 CD2BP2O95400 341 aaKnown RBP18.67■□□□□ 0.58
HOXC12-201ENST00000243103 PPP4R3BQ5MIZ7 849 aa18.67■□□□□ 0.58
HOXC12-201ENST00000243103 TESK2Q96S53 571 aa18.67■□□□□ 0.58
HOXC12-201ENST00000243103 SYCE3A1L190 88 aa18.66■□□□□ 0.58
HOXC12-201ENST00000243103 TSR2Q969E8 191 aaKnown RBP18.66■□□□□ 0.58
HOXC12-201ENST00000243103 U2AF1L5P0DN76 240 aaPredicted RBP18.65■□□□□ 0.58
HOXC12-201ENST00000243103 U2AF1Q01081 240 aaKnown RBP eCLIP18.65■□□□□ 0.58
HOXC12-201ENST00000243103 ZBTB9Q96C00 473 aa18.65■□□□□ 0.58
HOXC12-201ENST00000243103 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
HOXC12-201ENST00000243103 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
HOXC12-201ENST00000243103 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
HOXC12-201ENST00000243103 PRIM1P49642 420 aaKnown RBP18.64■□□□□ 0.58
HOXC12-201ENST00000243103 RWDD1Q9H446 243 aaPredicted RBP18.64■□□□□ 0.58
HOXC12-201ENST00000243103 PDIA4P13667 645 aaKnown RBP18.64■□□□□ 0.57
HOXC12-201ENST00000243103 RBSNQ9H1K0 784 aa18.64■□□□□ 0.57
HOXC12-201ENST00000243103 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
HOXC12-201ENST00000243103 PLEKHH2Q8IVE3 1493 aa18.63■□□□□ 0.57
HOXC12-201ENST00000243103 MLECQ14165 292 aa18.63■□□□□ 0.57
HOXC12-201ENST00000243103 GTF2E1P29083 439 aaPredicted RBP18.62■□□□□ 0.57
HOXC12-201ENST00000243103 PKP1Q13835 747 aa18.62■□□□□ 0.57
HOXC12-201ENST00000243103 WDR62O43379 1518 aa18.61■□□□□ 0.57
HOXC12-201ENST00000243103 ERICH4A6NGS2 130 aa18.61■□□□□ 0.57
HOXC12-201ENST00000243103 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
HOXC12-201ENST00000243103 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
HOXC12-201ENST00000243103 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
HOXC12-201ENST00000243103 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
HOXC12-201ENST00000243103 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.6■□□□□ 0.57
HOXC12-201ENST00000243103 PMFBP1Q8TBY8 1022 aa18.6■□□□□ 0.57
HOXC12-201ENST00000243103 SPAG9O60271 1321 aaKnown RBP18.6■□□□□ 0.57
HOXC12-201ENST00000243103 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
HOXC12-201ENST00000243103 CABP2Q9NPB3 220 aa18.59■□□□□ 0.57
HOXC12-201ENST00000243103 ROCK1Q13464 1354 aa18.59■□□□□ 0.57
HOXC12-201ENST00000243103 GAS2L2Q8NHY3 880 aa18.59■□□□□ 0.57
HOXC12-201ENST00000243103 TCOF1Q13428 1488 aaKnown RBP18.59■□□□□ 0.57
HOXC12-201ENST00000243103 ADGRF5Q8IZF2 1346 aa18.58■□□□□ 0.57
HOXC12-201ENST00000243103 NPHP1O15259 732 aa18.58■□□□□ 0.56
HOXC12-201ENST00000243103 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.56
HOXC12-201ENST00000243103 TTC12Q9H892 705 aaPredicted RBP18.58■□□□□ 0.56
HOXC12-201ENST00000243103 GRIN2AQ12879 1464 aa18.58■□□□□ 0.56
HOXC12-201ENST00000243103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.57■□□□□ 0.56
HOXC12-201ENST00000243103 ANKRD45Q5TZF3 282 aa18.57■□□□□ 0.56
HOXC12-201ENST00000243103 STAC3Q96MF2 364 aa18.57■□□□□ 0.56
HOXC12-201ENST00000243103 U2AF2P26368 475 aaKnown RBP eCLIP18.56■□□□□ 0.56
HOXC12-201ENST00000243103 SMC4Q9NTJ3 1288 aa18.56■□□□□ 0.56
HOXC12-201ENST00000243103 KDM5CP41229 1560 aa18.56■□□□□ 0.56
HOXC12-201ENST00000243103 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
HOXC12-201ENST00000243103 ZFP91Q96JP5 570 aaPredicted RBP18.56■□□□□ 0.56
HOXC12-201ENST00000243103 ATP10BO94823 1461 aa18.56■□□□□ 0.56
HOXC12-201ENST00000243103 ATP2B3Q16720 1220 aa18.55■□□□□ 0.56
HOXC12-201ENST00000243103 MTHFSP49914 203 aa18.54■□□□□ 0.56
HOXC12-201ENST00000243103 ZSCAN23Q3MJ62 389 aa18.54■□□□□ 0.56
HOXC12-201ENST00000243103 SMAP1Q8IYB5 467 aaPredicted RBP18.54■□□□□ 0.56
HOXC12-201ENST00000243103 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
HOXC12-201ENST00000243103 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
HOXC12-201ENST00000243103 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
HOXC12-201ENST00000243103 MAP7D2Q96T17 732 aa18.54■□□□□ 0.56
HOXC12-201ENST00000243103 CARD14Q9BXL6 1004 aa18.54■□□□□ 0.56
HOXC12-201ENST00000243103 THUMPD2Q9BTF0 503 aaKnown RBP18.53■□□□□ 0.56
HOXC12-201ENST00000243103 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
HOXC12-201ENST00000243103 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
HOXC12-201ENST00000243103 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
HOXC12-201ENST00000243103 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
HOXC12-201ENST00000243103 GCC2Q8IWJ2 1684 aa18.52■□□□□ 0.56
HOXC12-201ENST00000243103 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.55
HOXC12-201ENST00000243103 KCNJ4P48050 445 aa18.52■□□□□ 0.55
HOXC12-201ENST00000243103 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.55
HOXC12-201ENST00000243103 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.55
HOXC12-201ENST00000243103 MINK1Q8N4C8 1332 aaPredicted RBP18.52■□□□□ 0.55
HOXC12-201ENST00000243103 SKOR2Q2VWA4 1001 aaPredicted RBP18.51■□□□□ 0.55
HOXC12-201ENST00000243103 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
HOXC12-201ENST00000243103 ZSCAN20P17040 1043 aaPredicted RBP18.51■□□□□ 0.55
HOXC12-201ENST00000243103 CCDC94Q9BW85 323 aaPredicted RBP18.51■□□□□ 0.55
HOXC12-201ENST00000243103 STAG3Q9UJ98 1225 aa18.5■□□□□ 0.55
HOXC12-201ENST00000243103 PDE3AQ14432 1141 aa18.5■□□□□ 0.55
HOXC12-201ENST00000243103 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
HOXC12-201ENST00000243103 SASS6Q6UVJ0 657 aa18.49■□□□□ 0.55
HOXC12-201ENST00000243103 NSFL1CQ9UNZ2 370 aaKnown RBP18.49■□□□□ 0.55
HOXC12-201ENST00000243103 EIF3AQ14152 1382 aaKnown RBP18.49■□□□□ 0.55
HOXC12-201ENST00000243103 RALGAPBQ86X10 1494 aa18.49■□□□□ 0.55
HOXC12-201ENST00000243103 ZNF592Q92610 1267 aa18.49■□□□□ 0.55
HOXC12-201ENST00000243103 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
HOXC12-201ENST00000243103 DMTNQ08495 405 aa18.48■□□□□ 0.55
HOXC12-201ENST00000243103 ZGPATQ8N5A5 531 aaKnown RBP18.48■□□□□ 0.55
HOXC12-201ENST00000243103 USP25Q9UHP3 1055 aa18.48■□□□□ 0.55
HOXC12-201ENST00000243103 ZMYM4Q5VZL5 1548 aa18.48■□□□□ 0.55
HOXC12-201ENST00000243103 HMOX1P09601 288 aa18.48■□□□□ 0.55
HOXC12-201ENST00000243103 ZKSCAN5Q9Y2L8 839 aa18.48■□□□□ 0.55
HOXC12-201ENST00000243103 MBD5Q9P267 1494 aa18.47■□□□□ 0.55
HOXC12-201ENST00000243103 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
HOXC12-201ENST00000243103 DYNC1I1O14576 645 aa18.46■□□□□ 0.55
HOXC12-201ENST00000243103 RARSP54136 660 aaKnown RBP18.46■□□□□ 0.55
HOXC12-201ENST00000243103 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
HOXC12-201ENST00000243103 PDCL2Q8N4E4 241 aa18.46■□□□□ 0.55
HOXC12-201ENST00000243103 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.46■□□□□ 0.55
HOXC12-201ENST00000243103 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.46■□□□□ 0.55
HOXC12-201ENST00000243103 V9GYY5 206 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms