RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 ERVK-7P63135 1459 aa19.89■□□□□ 0.78
PCDHB8-201ENST00000239444 E9PSI1 815 aa19.89■□□□□ 0.78
PCDHB8-201ENST00000239444 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.78
PCDHB8-201ENST00000239444 NRXN1Q9ULB1 1477 aa19.89■□□□□ 0.77
PCDHB8-201ENST00000239444 ADGRB3O60242 1522 aa19.88■□□□□ 0.77
PCDHB8-201ENST00000239444 NPATQ14207 1427 aa19.87■□□□□ 0.77
PCDHB8-201ENST00000239444 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
PCDHB8-201ENST00000239444 NUTM2DQ5VT03 806 aaPredicted RBP19.86■□□□□ 0.77
PCDHB8-201ENST00000239444 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
PCDHB8-201ENST00000239444 USP19O94966 1318 aa19.85■□□□□ 0.77
PCDHB8-201ENST00000239444 CFAP65Q6ZU64 1925 aaKnown RBP19.85■□□□□ 0.77
PCDHB8-201ENST00000239444 NPC1L1Q9UHC9 1359 aa19.84■□□□□ 0.77
PCDHB8-201ENST00000239444 GGT6Q6P531 493 aa19.84■□□□□ 0.77
PCDHB8-201ENST00000239444 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
PCDHB8-201ENST00000239444 NEO1Q92859 1461 aa19.84■□□□□ 0.77
PCDHB8-201ENST00000239444 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
PCDHB8-201ENST00000239444 CLUAP1Q96AJ1 413 aa19.83■□□□□ 0.77
PCDHB8-201ENST00000239444 NOS1P29475 1434 aa19.83■□□□□ 0.77
PCDHB8-201ENST00000239444 ABCC3O15438 1527 aa19.82■□□□□ 0.76
PCDHB8-201ENST00000239444 MYO3AQ8NEV4 1616 aa19.82■□□□□ 0.76
PCDHB8-201ENST00000239444 RLBP1P12271 317 aa19.82■□□□□ 0.76
PCDHB8-201ENST00000239444 PPLO60437 1756 aa19.82■□□□□ 0.76
PCDHB8-201ENST00000239444 SLC24A1O60721 1099 aa19.82■□□□□ 0.76
PCDHB8-201ENST00000239444 TMEM132EQ6IEE7 984 aa19.81■□□□□ 0.76
PCDHB8-201ENST00000239444 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
PCDHB8-201ENST00000239444 SETBP1Q9Y6X0 1596 aa19.81■□□□□ 0.76
PCDHB8-201ENST00000239444 SLKQ9H2G2 1235 aaPredicted RBP19.8■□□□□ 0.76
PCDHB8-201ENST00000239444 NSD3Q9BZ95 1437 aa19.8■□□□□ 0.76
PCDHB8-201ENST00000239444 RAPGEF3O95398 923 aa19.8■□□□□ 0.76
PCDHB8-201ENST00000239444 CGNL1Q0VF96 1302 aa19.79■□□□□ 0.76
PCDHB8-201ENST00000239444 TCP11L2Q8N4U5 519 aa19.79■□□□□ 0.76
PCDHB8-201ENST00000239444 PCDHB15Q9Y5E8 787 aa19.79■□□□□ 0.76
PCDHB8-201ENST00000239444 CAMSAP1Q5T5Y3 1602 aa19.78■□□□□ 0.76
PCDHB8-201ENST00000239444 DIP2CQ9Y2E4 1556 aa19.78■□□□□ 0.76
PCDHB8-201ENST00000239444 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
PCDHB8-201ENST00000239444 PDE3AQ14432 1141 aa19.77■□□□□ 0.76
PCDHB8-201ENST00000239444 SIGLEC1Q9BZZ2 1709 aa19.77■□□□□ 0.76
PCDHB8-201ENST00000239444 RARSP54136 660 aaKnown RBP19.76■□□□□ 0.75
PCDHB8-201ENST00000239444 RICTORQ6R327 1708 aa19.76■□□□□ 0.75
PCDHB8-201ENST00000239444 POLR3AO14802 1390 aaPredicted RBP19.75■□□□□ 0.75
PCDHB8-201ENST00000239444 MTHFSP49914 203 aa19.75■□□□□ 0.75
PCDHB8-201ENST00000239444 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
PCDHB8-201ENST00000239444 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
PCDHB8-201ENST00000239444 RPGRIP1LQ68CZ1 1315 aa19.73■□□□□ 0.75
PCDHB8-201ENST00000239444 PIK3C2BO00750 1634 aa19.73■□□□□ 0.75
PCDHB8-201ENST00000239444 VIRMAQ69YN4 1812 aaKnown RBP19.73■□□□□ 0.75
PCDHB8-201ENST00000239444 SHPRHQ149N8 1683 aa19.73■□□□□ 0.75
PCDHB8-201ENST00000239444 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
PCDHB8-201ENST00000239444 POGKQ9P215 609 aa19.72■□□□□ 0.75
PCDHB8-201ENST00000239444 ZC3H13Q5T200 1668 aaKnown RBP19.72■□□□□ 0.75
PCDHB8-201ENST00000239444 SPRYD3Q8NCJ5 442 aa19.72■□□□□ 0.75
PCDHB8-201ENST00000239444 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
PCDHB8-201ENST00000239444 PDZRN3Q9UPQ7 1066 aa19.71■□□□□ 0.75
PCDHB8-201ENST00000239444 QRICH2Q9H0J4 1663 aa19.7■□□□□ 0.74
PCDHB8-201ENST00000239444 MAPK8IP3Q9UPT6 1336 aa19.69■□□□□ 0.74
PCDHB8-201ENST00000239444 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
PCDHB8-201ENST00000239444 UBE2Q2Q8WVN8 375 aa19.68■□□□□ 0.74
PCDHB8-201ENST00000239444 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
PCDHB8-201ENST00000239444 ARHGAP31Q2M1Z3 1444 aa19.68■□□□□ 0.74
PCDHB8-201ENST00000239444 ARXQ96QS3 562 aa19.67■□□□□ 0.74
PCDHB8-201ENST00000239444 YEATS2Q9ULM3 1422 aa19.67■□□□□ 0.74
PCDHB8-201ENST00000239444 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
PCDHB8-201ENST00000239444 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.74
PCDHB8-201ENST00000239444 NEXMIFQ5QGS0 1516 aa19.67■□□□□ 0.74
PCDHB8-201ENST00000239444 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
PCDHB8-201ENST00000239444 GLI2P10070 1586 aa19.65■□□□□ 0.74
PCDHB8-201ENST00000239444 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
PCDHB8-201ENST00000239444 NGEFQ8N5V2 710 aa19.65■□□□□ 0.74
PCDHB8-201ENST00000239444 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.73
PCDHB8-201ENST00000239444 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.73
PCDHB8-201ENST00000239444 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.73
PCDHB8-201ENST00000239444 PMFBP1Q8TBY8 1022 aa19.63■□□□□ 0.73
PCDHB8-201ENST00000239444 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
PCDHB8-201ENST00000239444 CABP2Q9NPB3 220 aa19.63■□□□□ 0.73
PCDHB8-201ENST00000239444 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
PCDHB8-201ENST00000239444 VGFO15240 615 aaPredicted RBP19.62■□□□□ 0.73
PCDHB8-201ENST00000239444 BECN1Q14457 450 aa19.62■□□□□ 0.73
PCDHB8-201ENST00000239444 TBC1D2Q9BYX2 928 aa19.62■□□□□ 0.73
PCDHB8-201ENST00000239444 IDI1Q13907 227 aa19.61■□□□□ 0.73
PCDHB8-201ENST00000239444 ARHGEF28Q8N1W1 1705 aaKnown RBP19.61■□□□□ 0.73
PCDHB8-201ENST00000239444 WDR63Q8IWG1 891 aa19.6■□□□□ 0.73
PCDHB8-201ENST00000239444 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
PCDHB8-201ENST00000239444 TBC1D32Q96NH3 1257 aa19.6■□□□□ 0.73
PCDHB8-201ENST00000239444 FTSJ3Q8IY81 847 aaKnown RBP19.59■□□□□ 0.73
PCDHB8-201ENST00000239444 CFAP53Q96M91 514 aa19.59■□□□□ 0.73
PCDHB8-201ENST00000239444 ANTXR1Q9H6X2 564 aa19.59■□□□□ 0.73
PCDHB8-201ENST00000239444 PREX1Q8TCU6 1659 aa19.59■□□□□ 0.73
PCDHB8-201ENST00000239444 EIF5BO60841 1220 aaKnown RBP19.58■□□□□ 0.73
PCDHB8-201ENST00000239444 MVPQ14764 893 aaKnown RBP19.58■□□□□ 0.73
PCDHB8-201ENST00000239444 SLC52A1Q9NWF4 448 aa19.58■□□□□ 0.73
PCDHB8-201ENST00000239444 MYO5BQ9ULV0 1848 aa19.58■□□□□ 0.73
PCDHB8-201ENST00000239444 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
PCDHB8-201ENST00000239444 GGNBP2Q9H3C7 697 aa19.58■□□□□ 0.72
PCDHB8-201ENST00000239444 RWDD1Q9H446 243 aaPredicted RBP19.58■□□□□ 0.72
PCDHB8-201ENST00000239444 UPF2Q9HAU5 1272 aaKnown RBP19.58■□□□□ 0.72
PCDHB8-201ENST00000239444 MFAP1P55081 439 aaKnown RBP19.57■□□□□ 0.72
PCDHB8-201ENST00000239444 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
PCDHB8-201ENST00000239444 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
PCDHB8-201ENST00000239444 STK26Q9P289 416 aa19.57■□□□□ 0.72
PCDHB8-201ENST00000239444 USP32Q8NFA0 1604 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms