RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 CLTCQ00610 1675 aaKnown RBP22.77■■□□□ 1.24
PRPF19-201ENST00000227524 IDI1Q13907 227 aa22.77■■□□□ 1.24
PRPF19-201ENST00000227524 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
PRPF19-201ENST00000227524 TRMT2AQ8IZ69 625 aaKnown RBP22.77■■□□□ 1.24
PRPF19-201ENST00000227524 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
PRPF19-201ENST00000227524 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
PRPF19-201ENST00000227524 C8orf34Q49A92 452 aa22.76■■□□□ 1.23
PRPF19-201ENST00000227524 MYO5BQ9ULV0 1848 aa22.75■■□□□ 1.23
PRPF19-201ENST00000227524 NKTRP30414 1462 aaKnown RBP22.75■■□□□ 1.23
PRPF19-201ENST00000227524 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
PRPF19-201ENST00000227524 RPGRIP1LQ68CZ1 1315 aa22.74■■□□□ 1.23
PRPF19-201ENST00000227524 FBXO31Q5XUX0 539 aaPredicted RBP22.74■■□□□ 1.23
PRPF19-201ENST00000227524 CCDC146Q8IYE0 955 aa22.74■■□□□ 1.23
PRPF19-201ENST00000227524 ERVK-7P63135 1459 aa22.74■■□□□ 1.23
PRPF19-201ENST00000227524 SLC52A1Q9NWF4 448 aa22.73■■□□□ 1.23
PRPF19-201ENST00000227524 VIRMAQ69YN4 1812 aaKnown RBP22.73■■□□□ 1.23
PRPF19-201ENST00000227524 TMEM131LA2VDJ0 1609 aa22.73■■□□□ 1.23
PRPF19-201ENST00000227524 SETBP1Q9Y6X0 1596 aa22.72■■□□□ 1.23
PRPF19-201ENST00000227524 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.23
PRPF19-201ENST00000227524 ADGRB1O14514 1584 aa22.7■■□□□ 1.22
PRPF19-201ENST00000227524 APAF1O14727 1248 aa22.69■■□□□ 1.22
PRPF19-201ENST00000227524 SLC4A3P48751 1232 aa22.69■■□□□ 1.22
PRPF19-201ENST00000227524 IL27Q8NEV9 243 aa22.69■■□□□ 1.22
PRPF19-201ENST00000227524 MLECQ14165 292 aa22.69■■□□□ 1.22
PRPF19-201ENST00000227524 C14orf93Q9H972 538 aaKnown RBP22.69■■□□□ 1.22
PRPF19-201ENST00000227524 NFKBIBQ15653 356 aa22.68■■□□□ 1.22
PRPF19-201ENST00000227524 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
PRPF19-201ENST00000227524 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
PRPF19-201ENST00000227524 MYO3AQ8NEV4 1616 aa22.67■■□□□ 1.22
PRPF19-201ENST00000227524 E9PSI1 815 aa22.66■■□□□ 1.22
PRPF19-201ENST00000227524 RGS3P49796 1198 aa22.66■■□□□ 1.22
PRPF19-201ENST00000227524 BCAR3O75815 825 aa22.65■■□□□ 1.22
PRPF19-201ENST00000227524 NUTM2DQ5VT03 806 aaPredicted RBP22.65■■□□□ 1.22
PRPF19-201ENST00000227524 ZFYVE9O95405 1425 aa22.64■■□□□ 1.21
PRPF19-201ENST00000227524 NGEFQ8N5V2 710 aa22.62■■□□□ 1.21
PRPF19-201ENST00000227524 VGFO15240 615 aaPredicted RBP22.62■■□□□ 1.21
PRPF19-201ENST00000227524 GSE1Q14687 1217 aa22.62■■□□□ 1.21
PRPF19-201ENST00000227524 SLC24A1O60721 1099 aa22.61■■□□□ 1.21
PRPF19-201ENST00000227524 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
PRPF19-201ENST00000227524 CARD14Q9BXL6 1004 aa22.6■■□□□ 1.21
PRPF19-201ENST00000227524 TMEM132EQ6IEE7 984 aa22.6■■□□□ 1.21
PRPF19-201ENST00000227524 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
PRPF19-201ENST00000227524 NINLQ9Y2I6 1382 aa22.59■■□□□ 1.21
PRPF19-201ENST00000227524 SBNO2Q9Y2G9 1366 aa22.58■■□□□ 1.21
PRPF19-201ENST00000227524 CGNL1Q0VF96 1302 aa22.57■■□□□ 1.2
PRPF19-201ENST00000227524 ZMYM3Q14202 1370 aa22.57■■□□□ 1.2
PRPF19-201ENST00000227524 POLR3AO14802 1390 aaPredicted RBP22.57■■□□□ 1.2
PRPF19-201ENST00000227524 IGHDP01880 384 aa22.57■■□□□ 1.2
PRPF19-201ENST00000227524 PDE3AQ14432 1141 aa22.56■■□□□ 1.2
PRPF19-201ENST00000227524 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
PRPF19-201ENST00000227524 A2ML1A8K2U0 1454 aa22.55■■□□□ 1.2
PRPF19-201ENST00000227524 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
PRPF19-201ENST00000227524 QRICH2Q9H0J4 1663 aa22.54■■□□□ 1.2
PRPF19-201ENST00000227524 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
PRPF19-201ENST00000227524 RTN4Q9NQC3 1192 aaKnown RBP22.53■■□□□ 1.2
PRPF19-201ENST00000227524 WWC1Q8IX03 1113 aa22.53■■□□□ 1.2
PRPF19-201ENST00000227524 FRAT1Q92837 279 aaPredicted RBP22.52■■□□□ 1.2
PRPF19-201ENST00000227524 CLUAP1Q96AJ1 413 aa22.52■■□□□ 1.2
PRPF19-201ENST00000227524 USP19O94966 1318 aa22.51■■□□□ 1.19
PRPF19-201ENST00000227524 MAPK8IP3Q9UPT6 1336 aa22.5■■□□□ 1.19
PRPF19-201ENST00000227524 CANXP27824 592 aaKnown RBP22.5■■□□□ 1.19
PRPF19-201ENST00000227524 IQSEC2Q5JU85 1478 aa22.5■■□□□ 1.19
PRPF19-201ENST00000227524 PANK1Q8TE04 598 aa22.49■■□□□ 1.19
PRPF19-201ENST00000227524 ESF1Q9H501 851 aaKnown RBP22.49■■□□□ 1.19
PRPF19-201ENST00000227524 COG6Q9Y2V7 657 aa22.49■■□□□ 1.19
PRPF19-201ENST00000227524 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
PRPF19-201ENST00000227524 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
PRPF19-201ENST00000227524 BRPF3Q9ULD4 1205 aa22.48■■□□□ 1.19
PRPF19-201ENST00000227524 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
PRPF19-201ENST00000227524 STAG3Q9UJ98 1225 aa22.48■■□□□ 1.19
PRPF19-201ENST00000227524 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
PRPF19-201ENST00000227524 ALKQ9UM73 1620 aa22.46■■□□□ 1.19
PRPF19-201ENST00000227524 RIMS2Q9UQ26 1411 aa22.45■■□□□ 1.18
PRPF19-201ENST00000227524 NLRP1Q9C000 1473 aa22.45■■□□□ 1.18
PRPF19-201ENST00000227524 MORC1Q86VD1 984 aa22.44■■□□□ 1.18
PRPF19-201ENST00000227524 RUNDC1Q96C34 613 aa22.44■■□□□ 1.18
PRPF19-201ENST00000227524 SETD1AO15047 1707 aaKnown RBP22.44■■□□□ 1.18
PRPF19-201ENST00000227524 TNRQ92752 1358 aa22.43■■□□□ 1.18
PRPF19-201ENST00000227524 TULP4Q9NRJ4 1543 aa22.42■■□□□ 1.18
PRPF19-201ENST00000227524 SEC24BO95487 1268 aa22.42■■□□□ 1.18
PRPF19-201ENST00000227524 RARSP54136 660 aaKnown RBP22.42■■□□□ 1.18
PRPF19-201ENST00000227524 PTPRMP28827 1452 aa22.42■■□□□ 1.18
PRPF19-201ENST00000227524 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
PRPF19-201ENST00000227524 ANO8Q9HCE9 1232 aaPredicted RBP22.41■■□□□ 1.18
PRPF19-201ENST00000227524 YTHDC2Q9H6S0 1430 aaKnown RBP22.41■■□□□ 1.18
PRPF19-201ENST00000227524 RRP7AQ9Y3A4 280 aaKnown RBP22.4■■□□□ 1.18
PRPF19-201ENST00000227524 NRXN3Q9Y4C0 1643 aa22.4■■□□□ 1.18
PRPF19-201ENST00000227524 AAMPQ13685 434 aa22.4■■□□□ 1.18
PRPF19-201ENST00000227524 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
PRPF19-201ENST00000227524 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
PRPF19-201ENST00000227524 PMFBP1Q8TBY8 1022 aa22.4■■□□□ 1.18
PRPF19-201ENST00000227524 UBR1Q8IWV7 1749 aa22.4■■□□□ 1.18
PRPF19-201ENST00000227524 TNNT2P45379 298 aaPredicted RBP22.38■■□□□ 1.17
PRPF19-201ENST00000227524 WDR63Q8IWG1 891 aa22.38■■□□□ 1.17
PRPF19-201ENST00000227524 STK26Q9P289 416 aa22.38■■□□□ 1.17
PRPF19-201ENST00000227524 C3P01024 1663 aa22.37■■□□□ 1.17
PRPF19-201ENST00000227524 BECN1Q14457 450 aa22.37■■□□□ 1.17
PRPF19-201ENST00000227524 SLC12A5Q9H2X9 1139 aa22.37■■□□□ 1.17
PRPF19-201ENST00000227524 RLBP1P12271 317 aa22.36■■□□□ 1.17
PRPF19-201ENST00000227524 FER1L4A9Z1Z3 1794 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms