RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
CCND1-201ENST00000227507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCND1-201ENST00000227507 TRAK2O60296 914 aa14.48□□□□□ -0.09
CCND1-201ENST00000227507 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
CCND1-201ENST00000227507 DUSP27Q5VZP5 1158 aa14.47□□□□□ -0.09
CCND1-201ENST00000227507 TNRQ92752 1358 aa14.47□□□□□ -0.09
CCND1-201ENST00000227507 HSCBQ8IWL3 235 aa14.47□□□□□ -0.09
CCND1-201ENST00000227507 RTF1Q92541 710 aaKnown RBP14.46□□□□□ -0.1
CCND1-201ENST00000227507 DNAJC5Q9H3Z4 198 aa14.46□□□□□ -0.1
CCND1-201ENST00000227507 DNMT1P26358 1616 aaKnown RBP14.45□□□□□ -0.1
CCND1-201ENST00000227507 KDM2BQ8NHM5 1336 aa14.45□□□□□ -0.1
CCND1-201ENST00000227507 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
CCND1-201ENST00000227507 KDM6BO15054 1643 aa14.45□□□□□ -0.1
CCND1-201ENST00000227507 FTSJ3Q8IY81 847 aaKnown RBP14.45□□□□□ -0.1
CCND1-201ENST00000227507 MCM4P33991 863 aa14.45□□□□□ -0.1
CCND1-201ENST00000227507 ATP7AQ04656 1500 aa14.44□□□□□ -0.1
CCND1-201ENST00000227507 TBC1D2Q9BYX2 928 aa14.44□□□□□ -0.1
CCND1-201ENST00000227507 ATP10AO60312 1499 aa14.44□□□□□ -0.1
CCND1-201ENST00000227507 ZCCHC11Q5TAX3 1644 aaKnown RBP14.44□□□□□ -0.1
CCND1-201ENST00000227507 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
CCND1-201ENST00000227507 DHX37Q8IY37 1157 aaKnown RBP14.43□□□□□ -0.1
CCND1-201ENST00000227507 FAM135AQ9P2D6 1515 aa14.43□□□□□ -0.1
CCND1-201ENST00000227507 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
CCND1-201ENST00000227507 MYO5CQ9NQX4 1742 aa14.43□□□□□ -0.1
CCND1-201ENST00000227507 PPP2R1AP30153 589 aa14.42□□□□□ -0.1
CCND1-201ENST00000227507 CCDC9Q9Y3X0 531 aaKnown RBP14.42□□□□□ -0.1
CCND1-201ENST00000227507 ESPNB1AK53 854 aa14.42□□□□□ -0.1
CCND1-201ENST00000227507 CHMP5Q9NZZ3 219 aa14.41□□□□□ -0.1
CCND1-201ENST00000227507 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
CCND1-201ENST00000227507 MRE11P49959 708 aa14.41□□□□□ -0.1
CCND1-201ENST00000227507 PDZRN3Q9UPQ7 1066 aa14.4□□□□□ -0.1
CCND1-201ENST00000227507 ADGRL2O95490 1459 aa14.4□□□□□ -0.1
CCND1-201ENST00000227507 MSNP26038 577 aaKnown RBP14.4□□□□□ -0.1
CCND1-201ENST00000227507 CFAP74Q9C0B2 1584 aa14.4□□□□□ -0.1
CCND1-201ENST00000227507 ESCO1Q5FWF5 840 aa14.4□□□□□ -0.11
CCND1-201ENST00000227507 RWDD1Q9H446 243 aaPredicted RBP14.4□□□□□ -0.11
CCND1-201ENST00000227507 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.11
CCND1-201ENST00000227507 FAM13BQ9NYF5 915 aa14.4□□□□□ -0.11
CCND1-201ENST00000227507 SLFN5Q08AF3 891 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 GRPEL1Q9HAV7 217 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 C22orf23Q9BZE7 217 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 GPRASP1Q5JY77 1395 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 E9PSI1 815 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 CALD1Q05682 793 aaKnown RBP14.39□□□□□ -0.11
CCND1-201ENST00000227507 NOS1P29475 1434 aa14.39□□□□□ -0.11
CCND1-201ENST00000227507 PER1O15534 1290 aaPredicted RBP14.38□□□□□ -0.11
CCND1-201ENST00000227507 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
CCND1-201ENST00000227507 ZMYM3Q14202 1370 aa14.37□□□□□ -0.11
CCND1-201ENST00000227507 CLCN1P35523 988 aa14.37□□□□□ -0.11
CCND1-201ENST00000227507 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
CCND1-201ENST00000227507 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
CCND1-201ENST00000227507 GOLGA6L22H0YM25 854 aa14.36□□□□□ -0.11
CCND1-201ENST00000227507 NLRP6P59044 892 aa14.36□□□□□ -0.11
CCND1-201ENST00000227507 TTC37Q6PGP7 1564 aa14.36□□□□□ -0.11
CCND1-201ENST00000227507 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
CCND1-201ENST00000227507 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
CCND1-201ENST00000227507 MBD5Q9P267 1494 aa14.35□□□□□ -0.11
CCND1-201ENST00000227507 ARHGEF5Q12774 1597 aa14.35□□□□□ -0.11
CCND1-201ENST00000227507 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
CCND1-201ENST00000227507 DDX11L8A8MPP1 907 aa14.35□□□□□ -0.11
CCND1-201ENST00000227507 AMOTL2Q9Y2J4 779 aa14.35□□□□□ -0.11
CCND1-201ENST00000227507 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
CCND1-201ENST00000227507 CABP1Q9NZU7 370 aa14.34□□□□□ -0.11
CCND1-201ENST00000227507 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
CCND1-201ENST00000227507 EVA1CP58658 441 aa14.34□□□□□ -0.11
CCND1-201ENST00000227507 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
CCND1-201ENST00000227507 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
CCND1-201ENST00000227507 KIAA1211Q6ZU35 1233 aa14.34□□□□□ -0.11
CCND1-201ENST00000227507 C14orf93Q9H972 538 aaKnown RBP14.34□□□□□ -0.11
CCND1-201ENST00000227507 TNNQ9UQP3 1299 aa14.34□□□□□ -0.11
CCND1-201ENST00000227507 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.11
CCND1-201ENST00000227507 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.11
CCND1-201ENST00000227507 LMOD3Q0VAK6 560 aa14.33□□□□□ -0.12
CCND1-201ENST00000227507 DISP3Q9P2K9 1392 aa14.33□□□□□ -0.12
CCND1-201ENST00000227507 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.12
CCND1-201ENST00000227507 ABTB2Q8N961 1025 aa14.32□□□□□ -0.12
CCND1-201ENST00000227507 NUTM2GQ5VZR2 741 aa14.32□□□□□ -0.12
CCND1-201ENST00000227507 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
CCND1-201ENST00000227507 TSPOAP1O95153 1857 aa14.32□□□□□ -0.12
CCND1-201ENST00000227507 DIAPH1O60610 1272 aaKnown RBP14.32□□□□□ -0.12
CCND1-201ENST00000227507 DNTTIP2Q5QJE6 756 aaKnown RBP14.31□□□□□ -0.12
CCND1-201ENST00000227507 TBC1D32Q96NH3 1257 aa14.31□□□□□ -0.12
CCND1-201ENST00000227507 DDX49Q9Y6V7 483 aaKnown RBP14.31□□□□□ -0.12
CCND1-201ENST00000227507 R3HCC1Q9Y3T6 440 aaKnown RBP14.31□□□□□ -0.12
CCND1-201ENST00000227507 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
CCND1-201ENST00000227507 PCDHB15Q9Y5E8 787 aa14.31□□□□□ -0.12
CCND1-201ENST00000227507 PREX2Q70Z35 1606 aa14.3□□□□□ -0.12
CCND1-201ENST00000227507 ABCC1P33527 1531 aa14.3□□□□□ -0.12
CCND1-201ENST00000227507 PDE3AQ14432 1141 aa14.3□□□□□ -0.12
CCND1-201ENST00000227507 USP19O94966 1318 aa14.3□□□□□ -0.12
CCND1-201ENST00000227507 MAGI2Q86UL8 1455 aa14.29□□□□□ -0.12
CCND1-201ENST00000227507 PTMAP06454 111 aaKnown RBP14.29□□□□□ -0.12
CCND1-201ENST00000227507 NUDT16Q96DE0 195 aaKnown RBP14.29□□□□□ -0.12
CCND1-201ENST00000227507 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
CCND1-201ENST00000227507 CHMP4AQ9BY43 222 aa14.29□□□□□ -0.12
CCND1-201ENST00000227507 RIMS2Q9UQ26 1411 aa14.29□□□□□ -0.12
CCND1-201ENST00000227507 MLH3Q9UHC1 1453 aa14.29□□□□□ -0.12
CCND1-201ENST00000227507 SMC4Q9NTJ3 1288 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms