RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
CCDC47-201ENST00000225726 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.82
CCDC47-201ENST00000225726 NINLQ9Y2I6 1382 aa20.14■□□□□ 0.81
CCDC47-201ENST00000225726 TECPR2O15040 1411 aa20.14■□□□□ 0.81
CCDC47-201ENST00000225726 ADAMTS13Q76LX8 1427 aa20.14■□□□□ 0.81
CCDC47-201ENST00000225726 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
CCDC47-201ENST00000225726 CPS1P31327 1500 aa20.13■□□□□ 0.81
CCDC47-201ENST00000225726 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
CCDC47-201ENST00000225726 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
CCDC47-201ENST00000225726 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
CCDC47-201ENST00000225726 LTKP29376 864 aa20.12■□□□□ 0.81
CCDC47-201ENST00000225726 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-201ENST00000225726 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-201ENST00000225726 TXNDC2Q86VQ3 553 aa20.12■□□□□ 0.81
CCDC47-201ENST00000225726 BCANQ96GW7 911 aa20.11■□□□□ 0.81
CCDC47-201ENST00000225726 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
CCDC47-201ENST00000225726 ATAD2Q6PL18 1390 aa20.11■□□□□ 0.81
CCDC47-201ENST00000225726 SIRT1Q96EB6 747 aa20.11■□□□□ 0.81
CCDC47-201ENST00000225726 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
CCDC47-201ENST00000225726 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
CCDC47-201ENST00000225726 MED14O60244 1454 aa20.1■□□□□ 0.81
CCDC47-201ENST00000225726 BCL11AQ9H165 835 aa20.1■□□□□ 0.81
CCDC47-201ENST00000225726 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
CCDC47-201ENST00000225726 ZNF142P52746 1687 aaPredicted RBP20.1■□□□□ 0.81
CCDC47-201ENST00000225726 ANKRD36BQ8N2N9 1353 aa20.1■□□□□ 0.81
CCDC47-201ENST00000225726 SRPK2P78362 688 aaKnown RBP20.09■□□□□ 0.81
CCDC47-201ENST00000225726 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.81
CCDC47-201ENST00000225726 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
CCDC47-201ENST00000225726 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.8
CCDC47-201ENST00000225726 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
CCDC47-201ENST00000225726 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
CCDC47-201ENST00000225726 CDK19Q9BWU1 502 aa20.06■□□□□ 0.8
CCDC47-201ENST00000225726 INSRP06213 1382 aa20.04■□□□□ 0.8
CCDC47-201ENST00000225726 TBX22Q9Y458 520 aa20.02■□□□□ 0.8
CCDC47-201ENST00000225726 NSD2O96028 1365 aa20.02■□□□□ 0.79
CCDC47-201ENST00000225726 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.79
CCDC47-201ENST00000225726 A0A1W2PP64 1363 aa20.01■□□□□ 0.79
CCDC47-201ENST00000225726 SETD1BQ9UPS6 1966 aaKnown RBP20■□□□□ 0.79
CCDC47-201ENST00000225726 ROBO2Q9HCK4 1378 aa20■□□□□ 0.79
CCDC47-201ENST00000225726 ADGRB2O60241 1585 aa20■□□□□ 0.79
CCDC47-201ENST00000225726 CD163L1Q9NR16 1453 aa20■□□□□ 0.79
CCDC47-201ENST00000225726 TERF2IPQ9NYB0 399 aa20■□□□□ 0.79
CCDC47-201ENST00000225726 PTPRUQ92729 1446 aa20■□□□□ 0.79
CCDC47-201ENST00000225726 WASLO00401 505 aaPredicted RBP19.99■□□□□ 0.79
CCDC47-201ENST00000225726 SLC26A8Q96RN1 970 aa19.99■□□□□ 0.79
CCDC47-201ENST00000225726 ATP7BP35670 1465 aa19.97■□□□□ 0.79
CCDC47-201ENST00000225726 BLMP54132 1417 aaPredicted RBP19.97■□□□□ 0.79
CCDC47-201ENST00000225726 MORC1Q86VD1 984 aa19.96■□□□□ 0.79
CCDC47-201ENST00000225726 PTCH1Q13635 1447 aa19.96■□□□□ 0.79
CCDC47-201ENST00000225726 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
CCDC47-201ENST00000225726 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
CCDC47-201ENST00000225726 XRN1Q8IZH2 1706 aaKnown RBP19.95■□□□□ 0.78
CCDC47-201ENST00000225726 ANKRD26Q9UPS8 1709 aa19.95■□□□□ 0.78
CCDC47-201ENST00000225726 CABP1Q9NZU7 370 aa19.94■□□□□ 0.78
CCDC47-201ENST00000225726 PIK3R4Q99570 1358 aa19.94■□□□□ 0.78
CCDC47-201ENST00000225726 ANKLE2Q86XL3 938 aa19.93■□□□□ 0.78
CCDC47-201ENST00000225726 AMOTL2Q9Y2J4 779 aa19.93■□□□□ 0.78
CCDC47-201ENST00000225726 KIF20BQ96Q89 1820 aa19.92■□□□□ 0.78
CCDC47-201ENST00000225726 WDR43Q15061 677 aaKnown RBP eCLIP19.91■□□□□ 0.78
CCDC47-201ENST00000225726 PPIP5K1Q6PFW1 1433 aa19.91■□□□□ 0.78
CCDC47-201ENST00000225726 POLR3AO14802 1390 aaPredicted RBP19.91■□□□□ 0.78
CCDC47-201ENST00000225726 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
CCDC47-201ENST00000225726 NUDT16Q96DE0 195 aaKnown RBP19.89■□□□□ 0.78
CCDC47-201ENST00000225726 CPSF1Q10570 1443 aaKnown RBP19.89■□□□□ 0.77
CCDC47-201ENST00000225726 TOPAZ1Q8N9V7 1692 aa19.89■□□□□ 0.77
CCDC47-201ENST00000225726 PRKCSHP14314 528 aaPredicted RBP19.88■□□□□ 0.77
CCDC47-201ENST00000225726 ADAMTS8Q9UP79 889 aa19.88■□□□□ 0.77
CCDC47-201ENST00000225726 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
CCDC47-201ENST00000225726 ITSN1Q15811 1721 aa19.88■□□□□ 0.77
CCDC47-201ENST00000225726 AKAP12Q02952 1782 aa19.87■□□□□ 0.77
CCDC47-201ENST00000225726 MON2Q7Z3U7 1717 aa19.87■□□□□ 0.77
CCDC47-201ENST00000225726 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
CCDC47-201ENST00000225726 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
CCDC47-201ENST00000225726 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
CCDC47-201ENST00000225726 FYB1O15117 783 aa19.85■□□□□ 0.77
CCDC47-201ENST00000225726 SHPRHQ149N8 1683 aa19.85■□□□□ 0.77
CCDC47-201ENST00000225726 TNNT2P45379 298 aaPredicted RBP19.84■□□□□ 0.77
CCDC47-201ENST00000225726 PRR36Q9H6K5 1346 aa19.84■□□□□ 0.77
CCDC47-201ENST00000225726 GGNBP2Q9H3C7 697 aa19.83■□□□□ 0.77
CCDC47-201ENST00000225726 NEFLP07196 543 aa19.82■□□□□ 0.76
CCDC47-201ENST00000225726 NUDCQ9Y266 331 aa19.82■□□□□ 0.76
CCDC47-201ENST00000225726 NPHP4O75161 1426 aaPredicted RBP19.82■□□□□ 0.76
CCDC47-201ENST00000225726 SUPT16HQ9Y5B9 1047 aaKnown RBP19.81■□□□□ 0.76
CCDC47-201ENST00000225726 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
CCDC47-201ENST00000225726 MTHFSP49914 203 aa19.81■□□□□ 0.76
CCDC47-201ENST00000225726 PDE3BQ13370 1112 aa19.81■□□□□ 0.76
CCDC47-201ENST00000225726 SENP3-EIF4A1A0A087X0R7 540 aa19.8■□□□□ 0.76
CCDC47-201ENST00000225726 KCNA6P17658 529 aa19.8■□□□□ 0.76
CCDC47-201ENST00000225726 ZNF692Q9BU19 519 aaPredicted RBP19.79■□□□□ 0.76
CCDC47-201ENST00000225726 NCKAP5LQ9HCH0 1330 aa19.79■□□□□ 0.76
CCDC47-201ENST00000225726 PLEKHG3A1L390 1219 aa19.78■□□□□ 0.76
CCDC47-201ENST00000225726 NRKQ7Z2Y5 1582 aa19.78■□□□□ 0.76
CCDC47-201ENST00000225726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCDC47-201ENST00000225726 FKBP8Q14318 412 aa19.77■□□□□ 0.76
CCDC47-201ENST00000225726 NKTRP30414 1462 aaKnown RBP19.76■□□□□ 0.75
CCDC47-201ENST00000225726 FMN2Q9NZ56 1722 aa19.76■□□□□ 0.75
CCDC47-201ENST00000225726 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
CCDC47-201ENST00000225726 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
CCDC47-201ENST00000225726 NALCNQ8IZF0 1738 aa19.74■□□□□ 0.75
CCDC47-201ENST00000225726 COL3A1P02461 1466 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms