RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
RBM28-201ENST00000223073 GOLGA3Q08378 1498 aa8.22□□□□□ -1.09
RBM28-201ENST00000223073 WASHC2AQ641Q2 1341 aa8.22□□□□□ -1.09
RBM28-201ENST00000223073 ESF1Q9H501 851 aaKnown RBP8.22□□□□□ -1.09
RBM28-201ENST00000223073 SH3BGRP55822 239 aaPredicted RBP8.22□□□□□ -1.09
RBM28-201ENST00000223073 SRPK2P78362 688 aaKnown RBP8.22□□□□□ -1.09
RBM28-201ENST00000223073 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.21□□□□□ -1.09
RBM28-201ENST00000223073 H3BQV1 296 aa8.21□□□□□ -1.1
RBM28-201ENST00000223073 TUBBP07437 444 aa8.21□□□□□ -1.1
RBM28-201ENST00000223073 IFFO2Q5TF58 517 aa8.21□□□□□ -1.1
RBM28-201ENST00000223073 JAKMIP3Q5VZ66 844 aa8.21□□□□□ -1.1
RBM28-201ENST00000223073 LRRCC1Q9C099 1032 aa8.21□□□□□ -1.1
RBM28-201ENST00000223073 TTC31Q49AM3 519 aaPredicted RBP8.21□□□□□ -1.1
RBM28-201ENST00000223073 PIK3R5Q8WYR1 880 aa8.21□□□□□ -1.1
RBM28-201ENST00000223073 KIF15Q9NS87 1388 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 WASHC2CQ9Y4E1 1318 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 TSPY4P0CV99 314 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 TSPY10P0CW01 314 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 SF3A1Q15459 793 aaKnown RBP8.2□□□□□ -1.1
RBM28-201ENST00000223073 UVSSAQ2YD98 709 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 AEBP2Q6ZN18 517 aaPredicted RBP8.2□□□□□ -1.1
RBM28-201ENST00000223073 CNKSR2Q8WXI2 1034 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 PDCP20941 246 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 NINLQ9Y2I6 1382 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 CCDC146Q8IYE0 955 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 KDM2AQ9Y2K7 1162 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 SRRTQ9BXP5 876 aaKnown RBP8.2□□□□□ -1.1
RBM28-201ENST00000223073 SOX12O15370 315 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
RBM28-201ENST00000223073 ERLIN2O94905 339 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 EZRP15311 586 aaKnown RBP8.19□□□□□ -1.1
RBM28-201ENST00000223073 WDR66Q8TBY9 1149 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 WDR78Q5VTH9 848 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
RBM28-201ENST00000223073 EXOC6Q8TAG9 804 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 A0A1B0GUA9 196 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 FMNL3Q8IVF7 1028 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 EFCC1Q9HA90 598 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 MYBBP1AQ9BQG0 1328 aaKnown RBP8.19□□□□□ -1.1
RBM28-201ENST00000223073 TOMM22Q9NS69 142 aa8.19□□□□□ -1.1
RBM28-201ENST00000223073 AKAP17AQ02040 695 aaKnown RBP8.18□□□□□ -1.1
RBM28-201ENST00000223073 INTS3Q68E01 1043 aaKnown RBP8.18□□□□□ -1.1
RBM28-201ENST00000223073 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.18□□□□□ -1.1
RBM28-201ENST00000223073 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
RBM28-201ENST00000223073 SIN3AQ96ST3 1273 aa8.18□□□□□ -1.1
RBM28-201ENST00000223073 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
RBM28-201ENST00000223073 CBFA2T2O43439 604 aa8.17□□□□□ -1.1
RBM28-201ENST00000223073 ZNF777Q9ULD5 760 aaPredicted RBP8.17□□□□□ -1.1
RBM28-201ENST00000223073 SAMD1Q6SPF0 538 aaPredicted RBP8.17□□□□□ -1.1
RBM28-201ENST00000223073 RNF168Q8IYW5 571 aaPredicted RBP8.17□□□□□ -1.1
RBM28-201ENST00000223073 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
RBM28-201ENST00000223073 CCDC73Q6ZRK6 1079 aa8.17□□□□□ -1.1
RBM28-201ENST00000223073 MTUS2Q5JR59 1369 aa8.17□□□□□ -1.1
RBM28-201ENST00000223073 SMARCE1Q969G3 411 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 CRBNQ96SW2 442 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 PRKRIP1Q9H875 184 aaPredicted RBP8.16□□□□□ -1.1
RBM28-201ENST00000223073 ANKRD30AQ9BXX3 1397 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 RSRC1Q96IZ7 334 aaKnown RBP8.16□□□□□ -1.1
RBM28-201ENST00000223073 ZKSCAN2Q63HK3 967 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 KCNA4P22459 653 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 RUFY2Q8WXA3 655 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 KIF3CO14782 793 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 RASSF8Q8NHQ8 419 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 PPM1EQ8WY54 764 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 DDX19BQ9UMR2 479 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 SH2D4BQ5SQS7 431 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 PIP4K2AP48426 406 aaPredicted RBP8.16□□□□□ -1.1
RBM28-201ENST00000223073 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.1
RBM28-201ENST00000223073 TCHPQ9BT92 498 aa8.16□□□□□ -1.1
RBM28-201ENST00000223073 ZKSCAN1P17029 563 aaPredicted RBP8.15□□□□□ -1.1
RBM28-201ENST00000223073 PTPN14Q15678 1187 aa8.15□□□□□ -1.1
RBM28-201ENST00000223073 OLFM4Q6UX06 510 aa8.15□□□□□ -1.1
RBM28-201ENST00000223073 RBM33Q96EV2 1170 aaKnown RBP8.15□□□□□ -1.1
RBM28-201ENST00000223073 ZNHIT6Q9NWK9 470 aaKnown RBP8.15□□□□□ -1.1
RBM28-201ENST00000223073 RBBP5Q15291 538 aaKnown RBP8.15□□□□□ -1.1
RBM28-201ENST00000223073 DMTNQ08495 405 aa8.15□□□□□ -1.1
RBM28-201ENST00000223073 GSDMDP57764 484 aa8.15□□□□□ -1.1
RBM28-201ENST00000223073 DNAJC21Q5F1R6 531 aaKnown RBP8.15□□□□□ -1.11
RBM28-201ENST00000223073 CLASRPQ8N2M8 674 aaKnown RBP8.15□□□□□ -1.11
RBM28-201ENST00000223073 PPP1R1BQ9UD71 204 aaPredicted RBP8.15□□□□□ -1.11
RBM28-201ENST00000223073 CCDC83Q8IWF9 413 aa8.15□□□□□ -1.11
RBM28-201ENST00000223073 PDE3AQ14432 1141 aa8.15□□□□□ -1.11
RBM28-201ENST00000223073 RPAINQ86UA6 219 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 FYB1O15117 783 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 AP1ARQ63HQ0 302 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 XRCC6P12956 609 aaKnown RBP eCLIP8.14□□□□□ -1.11
RBM28-201ENST00000223073 ATP6V1AP38606 617 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 SMG6Q86US8 1419 aaKnown RBP8.14□□□□□ -1.11
RBM28-201ENST00000223073 MKRN1Q9UHC7 482 aaKnown RBP8.14□□□□□ -1.11
RBM28-201ENST00000223073 CCDC38Q502W7 563 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 FAM114A1Q8IWE2 563 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 CRACR2AQ9BSW2 395 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 MAP2K2P36507 400 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 CEP120Q8N960 986 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 DBN1Q16643 649 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 SMC4Q9NTJ3 1288 aa8.14□□□□□ -1.11
RBM28-201ENST00000223073 LUC7LQ9NQ29 371 aaKnown RBP8.13□□□□□ -1.11
RBM28-201ENST00000223073 FOXD4L1Q9NU39 408 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 ZSCAN12O43309 604 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms