RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 FAM135BQ49AJ0 1406 aa23.09■■□□□ 1.29
POLR2E-201ENST00000215587 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
POLR2E-201ENST00000215587 SIRT1Q96EB6 747 aa23.09■■□□□ 1.29
POLR2E-201ENST00000215587 CCDC7Q96M83 1385 aa23.09■■□□□ 1.29
POLR2E-201ENST00000215587 AMOTL2Q9Y2J4 779 aa23.08■■□□□ 1.29
POLR2E-201ENST00000215587 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.28
POLR2E-201ENST00000215587 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
POLR2E-201ENST00000215587 XRN1Q8IZH2 1706 aaKnown RBP23.07■■□□□ 1.28
POLR2E-201ENST00000215587 PTCH1Q13635 1447 aa23.07■■□□□ 1.28
POLR2E-201ENST00000215587 KIF7Q2M1P5 1343 aa23.07■■□□□ 1.28
POLR2E-201ENST00000215587 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
POLR2E-201ENST00000215587 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
POLR2E-201ENST00000215587 ROBO2Q9HCK4 1378 aa23.04■■□□□ 1.28
POLR2E-201ENST00000215587 POLR3GLQ9BT43 218 aa23.04■■□□□ 1.28
POLR2E-201ENST00000215587 WAPLQ7Z5K2 1190 aa23.02■■□□□ 1.28
POLR2E-201ENST00000215587 CHD2O14647 1828 aaKnown RBP23.02■■□□□ 1.28
POLR2E-201ENST00000215587 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
POLR2E-201ENST00000215587 EVC2Q86UK5 1308 aa23.01■■□□□ 1.27
POLR2E-201ENST00000215587 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
POLR2E-201ENST00000215587 KCNA6P17658 529 aa23■■□□□ 1.27
POLR2E-201ENST00000215587 NWD1Q149M9 1564 aa23■■□□□ 1.27
POLR2E-201ENST00000215587 DDX10Q13206 875 aaKnown RBP22.98■■□□□ 1.27
POLR2E-201ENST00000215587 TULP4Q9NRJ4 1543 aa22.98■■□□□ 1.27
POLR2E-201ENST00000215587 DIEXFQ68CQ4 756 aaKnown RBP22.96■■□□□ 1.27
POLR2E-201ENST00000215587 NKTRP30414 1462 aaKnown RBP22.96■■□□□ 1.27
POLR2E-201ENST00000215587 PUS7Q96PZ0 661 aaKnown RBP22.93■■□□□ 1.26
POLR2E-201ENST00000215587 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
POLR2E-201ENST00000215587 SRPK2P78362 688 aaKnown RBP22.91■■□□□ 1.26
POLR2E-201ENST00000215587 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.9■■□□□ 1.26
POLR2E-201ENST00000215587 CDK19Q9BWU1 502 aa22.89■■□□□ 1.25
POLR2E-201ENST00000215587 ATAD2Q6PL18 1390 aa22.89■■□□□ 1.25
POLR2E-201ENST00000215587 WASLO00401 505 aaPredicted RBP22.88■■□□□ 1.25
POLR2E-201ENST00000215587 PROSER2Q86WR7 435 aaPredicted RBP22.88■■□□□ 1.25
POLR2E-201ENST00000215587 RGS17Q9UGC6 210 aaPredicted RBP22.88■■□□□ 1.25
POLR2E-201ENST00000215587 CABP2Q9NPB3 220 aa22.87■■□□□ 1.25
POLR2E-201ENST00000215587 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
POLR2E-201ENST00000215587 LRRC7Q96NW7 1537 aa22.85■■□□□ 1.25
POLR2E-201ENST00000215587 MYOM1P52179 1685 aa22.84■■□□□ 1.25
POLR2E-201ENST00000215587 C14orf37Q86TY3 774 aa22.84■■□□□ 1.25
POLR2E-201ENST00000215587 NINLQ9Y2I6 1382 aa22.84■■□□□ 1.25
POLR2E-201ENST00000215587 STRCP1A6NGW2 1772 aa22.83■■□□□ 1.24
POLR2E-201ENST00000215587 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
POLR2E-201ENST00000215587 TMC1Q8TDI8 760 aa22.82■■□□□ 1.24
POLR2E-201ENST00000215587 NCOA3Q9Y6Q9 1424 aa22.82■■□□□ 1.24
POLR2E-201ENST00000215587 CDC42BPGQ6DT37 1551 aa22.81■■□□□ 1.24
POLR2E-201ENST00000215587 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
POLR2E-201ENST00000215587 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
POLR2E-201ENST00000215587 NUDT16Q96DE0 195 aaKnown RBP22.78■■□□□ 1.24
POLR2E-201ENST00000215587 PANK3Q9H999 370 aa22.78■■□□□ 1.24
POLR2E-201ENST00000215587 ATP7BP35670 1465 aa22.77■■□□□ 1.24
POLR2E-201ENST00000215587 ANKARQ7Z5J8 1434 aa22.76■■□□□ 1.23
POLR2E-201ENST00000215587 SLC12A5Q9H2X9 1139 aa22.76■■□□□ 1.23
POLR2E-201ENST00000215587 FMN2Q9NZ56 1722 aa22.76■■□□□ 1.23
POLR2E-201ENST00000215587 C19orf44Q9H6X5 657 aa22.74■■□□□ 1.23
POLR2E-201ENST00000215587 TERF2IPQ9NYB0 399 aa22.74■■□□□ 1.23
POLR2E-201ENST00000215587 CCDC61Q9Y6R9 512 aa22.74■■□□□ 1.23
POLR2E-201ENST00000215587 ANKRD36BQ8N2N9 1353 aa22.74■■□□□ 1.23
POLR2E-201ENST00000215587 PPIP5K1Q6PFW1 1433 aa22.74■■□□□ 1.23
POLR2E-201ENST00000215587 PRR36Q9H6K5 1346 aa22.73■■□□□ 1.23
POLR2E-201ENST00000215587 DCCP43146 1447 aa22.73■■□□□ 1.23
POLR2E-201ENST00000215587 NUTM2FA1L443 756 aa22.72■■□□□ 1.23
POLR2E-201ENST00000215587 ANP32CO43423 234 aa22.72■■□□□ 1.23
POLR2E-201ENST00000215587 POTEAQ6S8J7 498 aa22.72■■□□□ 1.23
POLR2E-201ENST00000215587 CABP1Q9NZU7 370 aa22.72■■□□□ 1.23
POLR2E-201ENST00000215587 MSH6P52701 1360 aa22.72■■□□□ 1.23
POLR2E-201ENST00000215587 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
POLR2E-201ENST00000215587 HDGFL2Q7Z4V5 671 aaPredicted RBP22.71■■□□□ 1.23
POLR2E-201ENST00000215587 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
POLR2E-201ENST00000215587 ITSN1Q15811 1721 aa22.71■■□□□ 1.23
POLR2E-201ENST00000215587 USP32Q8NFA0 1604 aa22.7■■□□□ 1.22
POLR2E-201ENST00000215587 ATF3P18847 181 aa22.69■■□□□ 1.22
POLR2E-201ENST00000215587 A0A1W2PP64 1363 aa22.68■■□□□ 1.22
POLR2E-201ENST00000215587 PER1O15534 1290 aaPredicted RBP22.67■■□□□ 1.22
POLR2E-201ENST00000215587 NSD3Q9BZ95 1437 aa22.66■■□□□ 1.22
POLR2E-201ENST00000215587 CADPS2Q86UW7 1296 aa22.66■■□□□ 1.22
POLR2E-201ENST00000215587 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
POLR2E-201ENST00000215587 PLEKHG3A1L390 1219 aa22.65■■□□□ 1.22
POLR2E-201ENST00000215587 XIRP1Q702N8 1843 aaKnown RBP22.65■■□□□ 1.22
POLR2E-201ENST00000215587 CARD14Q9BXL6 1004 aa22.64■■□□□ 1.21
POLR2E-201ENST00000215587 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
POLR2E-201ENST00000215587 MIER1Q8N108 512 aa22.63■■□□□ 1.21
POLR2E-201ENST00000215587 CPSF1Q10570 1443 aaKnown RBP22.63■■□□□ 1.21
POLR2E-201ENST00000215587 ZNF692Q9BU19 519 aaPredicted RBP22.62■■□□□ 1.21
POLR2E-201ENST00000215587 NPC1L1Q9UHC9 1359 aa22.61■■□□□ 1.21
POLR2E-201ENST00000215587 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
POLR2E-201ENST00000215587 ACEP12821 1306 aa22.6■■□□□ 1.21
POLR2E-201ENST00000215587 CGNL1Q0VF96 1302 aa22.6■■□□□ 1.21
POLR2E-201ENST00000215587 MST1RQ04912 1400 aa22.6■■□□□ 1.21
POLR2E-201ENST00000215587 EDC4Q6P2E9 1401 aaKnown RBP22.6■■□□□ 1.21
POLR2E-201ENST00000215587 CNGB1Q14028 1251 aaPredicted RBP22.6■■□□□ 1.21
POLR2E-201ENST00000215587 NGDNQ8NEJ9 315 aaKnown RBP22.6■■□□□ 1.21
POLR2E-201ENST00000215587 PMFBP1Q8TBY8 1022 aa22.6■■□□□ 1.21
POLR2E-201ENST00000215587 PHF8Q9UPP1 1060 aa22.6■■□□□ 1.21
POLR2E-201ENST00000215587 RGPD8O14715 1765 aaPredicted RBP22.6■■□□□ 1.21
POLR2E-201ENST00000215587 AKAP12Q02952 1782 aa22.59■■□□□ 1.21
POLR2E-201ENST00000215587 ESCO1Q5FWF5 840 aa22.59■■□□□ 1.21
POLR2E-201ENST00000215587 AMER1Q5JTC6 1135 aaPredicted RBP22.59■■□□□ 1.21
POLR2E-201ENST00000215587 PRKRIP1Q9H875 184 aaPredicted RBP22.59■■□□□ 1.21
POLR2E-201ENST00000215587 POLR3AO14802 1390 aaPredicted RBP22.59■■□□□ 1.21
POLR2E-201ENST00000215587 CC2D1BQ5T0F9 858 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms