RNA–Protein interactions for RNA: ENST00000200639.8

LAMP2-201, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LAMP2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-201ENST00000200639 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
LAMP2-201ENST00000200639 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
LAMP2-201ENST00000200639 KNDC1Q76NI1 1749 aa18.47■□□□□ 0.55
LAMP2-201ENST00000200639 SBNO2Q9Y2G9 1366 aa18.46■□□□□ 0.55
LAMP2-201ENST00000200639 CPS1P31327 1500 aa18.46■□□□□ 0.55
LAMP2-201ENST00000200639 EVC2Q86UK5 1308 aa18.46■□□□□ 0.55
LAMP2-201ENST00000200639 CDCA8Q53HL2 280 aa18.46■□□□□ 0.54
LAMP2-201ENST00000200639 XRN1Q8IZH2 1706 aaKnown RBP18.44■□□□□ 0.54
LAMP2-201ENST00000200639 PTCH1Q13635 1447 aa18.44■□□□□ 0.54
LAMP2-201ENST00000200639 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
LAMP2-201ENST00000200639 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
LAMP2-201ENST00000200639 CDK19Q9BWU1 502 aa18.43■□□□□ 0.54
LAMP2-201ENST00000200639 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
LAMP2-201ENST00000200639 ZNF335Q9H4Z2 1342 aaPredicted RBP18.41■□□□□ 0.54
LAMP2-201ENST00000200639 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
LAMP2-201ENST00000200639 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.54
LAMP2-201ENST00000200639 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
LAMP2-201ENST00000200639 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.39■□□□□ 0.53
LAMP2-201ENST00000200639 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
LAMP2-201ENST00000200639 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
LAMP2-201ENST00000200639 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
LAMP2-201ENST00000200639 NWD1Q149M9 1564 aa18.36■□□□□ 0.53
LAMP2-201ENST00000200639 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
LAMP2-201ENST00000200639 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
LAMP2-201ENST00000200639 SLC12A5Q9H2X9 1139 aa18.34■□□□□ 0.53
LAMP2-201ENST00000200639 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
LAMP2-201ENST00000200639 PANK3Q9H999 370 aa18.33■□□□□ 0.53
LAMP2-201ENST00000200639 TMEM94Q12767 1356 aa18.33■□□□□ 0.52
LAMP2-201ENST00000200639 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
LAMP2-201ENST00000200639 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
LAMP2-201ENST00000200639 C19orf44Q9H6X5 657 aa18.31■□□□□ 0.52
LAMP2-201ENST00000200639 CABP1Q9NZU7 370 aa18.31■□□□□ 0.52
LAMP2-201ENST00000200639 ADGRL3Q9HAR2 1447 aa18.3■□□□□ 0.52
LAMP2-201ENST00000200639 ADGRB2O60241 1585 aa18.29■□□□□ 0.52
LAMP2-201ENST00000200639 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
LAMP2-201ENST00000200639 PRR36Q9H6K5 1346 aa18.28■□□□□ 0.52
LAMP2-201ENST00000200639 NALCNQ8IZF0 1738 aa18.28■□□□□ 0.52
LAMP2-201ENST00000200639 CNGB1Q14028 1251 aaPredicted RBP18.28■□□□□ 0.52
LAMP2-201ENST00000200639 LRRC7Q96NW7 1537 aa18.26■□□□□ 0.51
LAMP2-201ENST00000200639 ATF3P18847 181 aa18.26■□□□□ 0.51
LAMP2-201ENST00000200639 MYOM1P52179 1685 aa18.26■□□□□ 0.51
LAMP2-201ENST00000200639 NCOA3Q9Y6Q9 1424 aa18.25■□□□□ 0.51
LAMP2-201ENST00000200639 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
LAMP2-201ENST00000200639 PER1O15534 1290 aaPredicted RBP18.24■□□□□ 0.51
LAMP2-201ENST00000200639 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
LAMP2-201ENST00000200639 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
LAMP2-201ENST00000200639 MSH6P52701 1360 aa18.24■□□□□ 0.51
LAMP2-201ENST00000200639 NINLQ9Y2I6 1382 aa18.24■□□□□ 0.51
LAMP2-201ENST00000200639 ATP7BP35670 1465 aa18.23■□□□□ 0.51
LAMP2-201ENST00000200639 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
LAMP2-201ENST00000200639 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
LAMP2-201ENST00000200639 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
LAMP2-201ENST00000200639 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
LAMP2-201ENST00000200639 RGPD8O14715 1765 aaPredicted RBP18.22■□□□□ 0.51
LAMP2-201ENST00000200639 ANP32CO43423 234 aa18.21■□□□□ 0.51
LAMP2-201ENST00000200639 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
LAMP2-201ENST00000200639 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
LAMP2-201ENST00000200639 XIRP1Q702N8 1843 aaKnown RBP18.21■□□□□ 0.51
LAMP2-201ENST00000200639 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
LAMP2-201ENST00000200639 ANKRD36BQ8N2N9 1353 aa18.2■□□□□ 0.5
LAMP2-201ENST00000200639 ANKARQ7Z5J8 1434 aa18.2■□□□□ 0.5
LAMP2-201ENST00000200639 A0A1W2PP64 1363 aa18.2■□□□□ 0.5
LAMP2-201ENST00000200639 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
LAMP2-201ENST00000200639 PLEKHG3A1L390 1219 aa18.2■□□□□ 0.5
LAMP2-201ENST00000200639 USP32Q8NFA0 1604 aa18.19■□□□□ 0.5
LAMP2-201ENST00000200639 ACEP12821 1306 aa18.19■□□□□ 0.5
LAMP2-201ENST00000200639 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
LAMP2-201ENST00000200639 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
LAMP2-201ENST00000200639 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
LAMP2-201ENST00000200639 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
LAMP2-201ENST00000200639 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
LAMP2-201ENST00000200639 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
LAMP2-201ENST00000200639 DCCP43146 1447 aa18.17■□□□□ 0.5
LAMP2-201ENST00000200639 LTBP4Q8N2S1 1624 aa18.17■□□□□ 0.5
LAMP2-201ENST00000200639 ZNF692Q9BU19 519 aaPredicted RBP18.16■□□□□ 0.5
LAMP2-201ENST00000200639 NSD3Q9BZ95 1437 aa18.16■□□□□ 0.5
LAMP2-201ENST00000200639 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
LAMP2-201ENST00000200639 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
LAMP2-201ENST00000200639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
LAMP2-201ENST00000200639 CPSF1Q10570 1443 aaKnown RBP18.14■□□□□ 0.49
LAMP2-201ENST00000200639 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
LAMP2-201ENST00000200639 C1orf167Q5SNV9 1468 aa18.14■□□□□ 0.49
LAMP2-201ENST00000200639 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
LAMP2-201ENST00000200639 SLAIN2Q9P270 581 aa18.14■□□□□ 0.49
LAMP2-201ENST00000200639 ITSN1Q15811 1721 aa18.13■□□□□ 0.49
LAMP2-201ENST00000200639 CGNL1Q0VF96 1302 aa18.13■□□□□ 0.49
LAMP2-201ENST00000200639 MST1RQ04912 1400 aa18.13■□□□□ 0.49
LAMP2-201ENST00000200639 FOXO3O43524 673 aa18.12■□□□□ 0.49
LAMP2-201ENST00000200639 PSME1Q06323 249 aa18.12■□□□□ 0.49
LAMP2-201ENST00000200639 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
LAMP2-201ENST00000200639 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
LAMP2-201ENST00000200639 FYB1O15117 783 aa18.09■□□□□ 0.49
LAMP2-201ENST00000200639 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
LAMP2-201ENST00000200639 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
LAMP2-201ENST00000200639 USP6P35125 1406 aa18.08■□□□□ 0.49
LAMP2-201ENST00000200639 EDC4Q6P2E9 1401 aaKnown RBP18.08■□□□□ 0.49
LAMP2-201ENST00000200639 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
LAMP2-201ENST00000200639 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
LAMP2-201ENST00000200639 RALBP1Q15311 655 aa18.07■□□□□ 0.48
LAMP2-201ENST00000200639 DDX17Q92841 729 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms