RNA–Protein interactions for RNA: ENSMUST00000222316.1

Trim9-209, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 2 BASIC

Gene Trim9, Length 3,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-209ENSMUST00000222316 Prex1Q69ZK0 1650 aa16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 Ttc41Q692V3 1318 aa16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 Nkx1-2P42580 305 aa16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 Exosc9Q9JHI7 438 aaKnown RBP16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 Clasp1Q80TV8 1535 aaKnown RBP16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 PrkcshO08795 521 aa16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 Hsp90aa1P07901 733 aaKnown RBP16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 Cep152A2AUM9 1736 aaKnown RBP16.13■□□□□ 0.17
Trim9-209ENSMUST00000222316 IqubQ8CDK3 788 aa16.12■□□□□ 0.17
Trim9-209ENSMUST00000222316 Smc5Q8CG46 1101 aaKnown RBP16.12■□□□□ 0.17
Trim9-209ENSMUST00000222316 Cdk5rap2Q8K389 1822 aa16.12■□□□□ 0.17
Trim9-209ENSMUST00000222316 Rims1Q99NE5 1463 aa16.11■□□□□ 0.17
Trim9-209ENSMUST00000222316 4933416C03RikQ3V063 378 aa16.11■□□□□ 0.17
Trim9-209ENSMUST00000222316 Ksr2Q3UVC0 959 aa16.11■□□□□ 0.17
Trim9-209ENSMUST00000222316 Ralbp1Q62172 648 aa16.11■□□□□ 0.17
Trim9-209ENSMUST00000222316 Eif2s2Q99L45 331 aaKnown RBP16.1■□□□□ 0.17
Trim9-209ENSMUST00000222316 OvosQ3UU35 1456 aa16.1■□□□□ 0.17
Trim9-209ENSMUST00000222316 Gli2Q0VGT2 1544 aa16.1■□□□□ 0.17
Trim9-209ENSMUST00000222316 Senp3Q9EP97 568 aaKnown RBP16.1■□□□□ 0.17
Trim9-209ENSMUST00000222316 Abca8aQ8K442 1620 aa16.1■□□□□ 0.17
Trim9-209ENSMUST00000222316 Tsen2Q6P7W5 460 aa16.09■□□□□ 0.17
Trim9-209ENSMUST00000222316 Dnai1Q8C0M8 701 aa16.09■□□□□ 0.17
Trim9-209ENSMUST00000222316 Tmem131lQ3U3D7 1597 aa16.09■□□□□ 0.17
Trim9-209ENSMUST00000222316 Ak7Q9D2H2 614 aa16.08■□□□□ 0.17
Trim9-209ENSMUST00000222316 Adgrb3Q80ZF8 1522 aa16.08■□□□□ 0.16
Trim9-209ENSMUST00000222316 Myom1Q62234 1667 aaKnown RBP16.08■□□□□ 0.16
Trim9-209ENSMUST00000222316 Rlbp1Q9Z275 317 aa16.08■□□□□ 0.16
Trim9-209ENSMUST00000222316 IbtkQ6ZPR6 1352 aaKnown RBP16.07■□□□□ 0.16
Trim9-209ENSMUST00000222316 Cald1E9QA15 768 aaKnown RBP16.07■□□□□ 0.16
Trim9-209ENSMUST00000222316 Hsp90ab1P11499 724 aaKnown RBP16.06■□□□□ 0.16
Trim9-209ENSMUST00000222316 Ppp1r3fQ9JIG4 799 aa16.06■□□□□ 0.16
Trim9-209ENSMUST00000222316 Efcab6Q6P1E8 1516 aa16.06■□□□□ 0.16
Trim9-209ENSMUST00000222316 Shq1Q7TMX5 569 aa16.05■□□□□ 0.16
Trim9-209ENSMUST00000222316 Cluap1Q8R3P7 413 aa16.05■□□□□ 0.16
Trim9-209ENSMUST00000222316 Duxf3A0A0N4SV92 674 aa16.05■□□□□ 0.16
Trim9-209ENSMUST00000222316 Lrrc7Q80TE7 1490 aa16.05■□□□□ 0.16
Trim9-209ENSMUST00000222316 Znf330Q922H9 316 aa16.05■□□□□ 0.16
Trim9-209ENSMUST00000222316 Talpid3E9PV87 1520 aa16.04■□□□□ 0.16
Trim9-209ENSMUST00000222316 Scaf11E9PZM7 1456 aaKnown RBP16.04■□□□□ 0.16
Trim9-209ENSMUST00000222316 CenpjQ569L8 1344 aa16.03■□□□□ 0.16
Trim9-209ENSMUST00000222316 Gprasp1Q5U4C1 1347 aa16.03■□□□□ 0.16
Trim9-209ENSMUST00000222316 Mapk8ip3Q9ESN9 1337 aa16.03■□□□□ 0.16
Trim9-209ENSMUST00000222316 Ehbp1l1Q99MS7 1716 aa16.03■□□□□ 0.16
Trim9-209ENSMUST00000222316 Trim58Q5NCC9 485 aa16.03■□□□□ 0.16
Trim9-209ENSMUST00000222316 Map4k4P97820 1233 aaKnown RBP16.02■□□□□ 0.16
Trim9-209ENSMUST00000222316 PalldQ9ET54 1408 aa16.02■□□□□ 0.16
Trim9-209ENSMUST00000222316 KarsQ99MN1 595 aaKnown RBP16.02■□□□□ 0.15
Trim9-209ENSMUST00000222316 Pnmal2G3X9N3 661 aa16■□□□□ 0.15
Trim9-209ENSMUST00000222316 Ipo8Q7TMY7 1010 aa16■□□□□ 0.15
Trim9-209ENSMUST00000222316 Q9D9H8 365 aa16■□□□□ 0.15
Trim9-209ENSMUST00000222316 Myom2Q14BI5 1463 aa16■□□□□ 0.15
Trim9-209ENSMUST00000222316 Ccdc183A2AJB1 534 aa16■□□□□ 0.15
Trim9-209ENSMUST00000222316 Dusp27Q148W8 1138 aa16■□□□□ 0.15
Trim9-209ENSMUST00000222316 Uggt1Q6P5E4 1551 aa16■□□□□ 0.15
Trim9-209ENSMUST00000222316 Cfap65Q3V0B4 1847 aa15.99■□□□□ 0.15
Trim9-209ENSMUST00000222316 Ppm1gQ61074 542 aa15.98■□□□□ 0.15
Trim9-209ENSMUST00000222316 Topbp1Q6ZQF0 1515 aa15.98■□□□□ 0.15
Trim9-209ENSMUST00000222316 DnmbpQ6TXD4 1580 aa15.98■□□□□ 0.15
Trim9-209ENSMUST00000222316 Znf316Q6PGE4 1016 aa15.97■□□□□ 0.15
Trim9-209ENSMUST00000222316 InsrP15208 1372 aa15.97■□□□□ 0.15
Trim9-209ENSMUST00000222316 Gm6268A2A3U9 297 aa15.97■□□□□ 0.15
Trim9-209ENSMUST00000222316 Nutm1Q8BHP2 1126 aa15.97■□□□□ 0.15
Trim9-209ENSMUST00000222316 Utp14aQ640M1 767 aaKnown RBP15.97■□□□□ 0.15
Trim9-209ENSMUST00000222316 Yeats2Q3TUF7 1407 aa15.96■□□□□ 0.14
Trim9-209ENSMUST00000222316 Skint5A7XUY5 1461 aa15.95■□□□□ 0.14
Trim9-209ENSMUST00000222316 Sipa1l1Q8C0T5 1782 aa15.95■□□□□ 0.14
Trim9-209ENSMUST00000222316 Pabpn1Q8CCS6 302 aaKnown RBP15.94■□□□□ 0.14
Trim9-209ENSMUST00000222316 Ccar1Q8CH18 1146 aaKnown RBP15.94■□□□□ 0.14
Trim9-209ENSMUST00000222316 Atp2b2Q9R0K7 1198 aa15.94■□□□□ 0.14
Trim9-209ENSMUST00000222316 Iqsec2Q5DU25 1478 aa15.93■□□□□ 0.14
Trim9-209ENSMUST00000222316 Slc52a2Q9D8F3 450 aa15.93■□□□□ 0.14
Trim9-209ENSMUST00000222316 Plin1Q8CGN5 517 aa15.93■□□□□ 0.14
Trim9-209ENSMUST00000222316 Znf521Q6KAS7 1311 aa15.93■□□□□ 0.14
Trim9-209ENSMUST00000222316 Dip2cE9PWR4 1557 aa15.92■□□□□ 0.14
Trim9-209ENSMUST00000222316 Nectin2P32507 530 aa15.92■□□□□ 0.14
Trim9-209ENSMUST00000222316 Trpm1Q2TV84 1622 aa15.92■□□□□ 0.14
Trim9-209ENSMUST00000222316 Birc3O08863 600 aa15.92■□□□□ 0.14
Trim9-209ENSMUST00000222316 Ccdc60Q8C4J0 545 aa15.92■□□□□ 0.14
Trim9-209ENSMUST00000222316 Mre11Q61216 706 aa15.92■□□□□ 0.14
Trim9-209ENSMUST00000222316 Prrc2bQ7TPM1 1486 aaKnown RBP15.91■□□□□ 0.14
Trim9-209ENSMUST00000222316 Gm156Q58A37 223 aa15.91■□□□□ 0.14
Trim9-209ENSMUST00000222316 NinlQ6ZQ12 1394 aa15.91■□□□□ 0.14
Trim9-209ENSMUST00000222316 Prdm2A2A7B5 1709 aaKnown RBP15.91■□□□□ 0.14
Trim9-209ENSMUST00000222316 Atp10aO54827 1508 aa15.91■□□□□ 0.14
Trim9-209ENSMUST00000222316 Depdc5P61460 1591 aa15.91■□□□□ 0.14
Trim9-209ENSMUST00000222316 Cdk19Q8BWD8 501 aa15.91■□□□□ 0.14
Trim9-209ENSMUST00000222316 Cep170bQ80U49 1574 aa15.9■□□□□ 0.14
Trim9-209ENSMUST00000222316 Afap1Q80YS6 731 aa15.9■□□□□ 0.14
Trim9-209ENSMUST00000222316 Knl1Q66JQ7 1612 aa15.9■□□□□ 0.14
Trim9-209ENSMUST00000222316 Asxl2Q8BZ32 1370 aa15.9■□□□□ 0.14
Trim9-209ENSMUST00000222316 Gsto1O09131 240 aa15.9■□□□□ 0.14
Trim9-209ENSMUST00000222316 Tmco5bQ80X59 307 aa15.9■□□□□ 0.14
Trim9-209ENSMUST00000222316 MaddQ80U28 1577 aa15.89■□□□□ 0.13
Trim9-209ENSMUST00000222316 Ppp2r3aB2RXC8 1150 aa15.88■□□□□ 0.13
Trim9-209ENSMUST00000222316 Rbm25B2RY56 838 aaKnown RBP15.88■□□□□ 0.13
Trim9-209ENSMUST00000222316 AU019823E9PUQ3 292 aa15.88■□□□□ 0.13
Trim9-209ENSMUST00000222316 Ino80Q6ZPV2 1559 aa15.88■□□□□ 0.13
Trim9-209ENSMUST00000222316 Mfap1aC0HKD8 439 aaKnown RBP15.87■□□□□ 0.13
Trim9-209ENSMUST00000222316 Mfap1bC0HKD9 439 aaKnown RBP15.87■□□□□ 0.13
Trim9-209ENSMUST00000222316 Spryd3E9Q9B3 442 aa15.87■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms