RNA–Protein interactions for RNA: ENSMUST00000222316.1

Trim9-209, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 2 BASIC

Gene Trim9, Length 3,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-209ENSMUST00000222316 NischQ80TM9 1593 aa23.64■■□□□ 1.38
Trim9-209ENSMUST00000222316 Abcc9P70170 1546 aa22.86■■□□□ 1.25
Trim9-209ENSMUST00000222316 Gm35339A0A140LHH9 1649 aa22.86■■□□□ 1.25
Trim9-209ENSMUST00000222316 Rhox8Q6VSS7 320 aa22.52■■□□□ 1.2
Trim9-209ENSMUST00000222316 Abcc8B2RUS7 1588 aa22.35■■□□□ 1.17
Trim9-209ENSMUST00000222316 Rtl1Q7M732 1744 aa21.58■■□□□ 1.04
Trim9-209ENSMUST00000222316 Ccdc180J3QNE4 1664 aa21.35■■□□□ 1.01
Trim9-209ENSMUST00000222316 Zcchc6Q5BLK4 1491 aaKnown RBP21■□□□□ 0.95
Trim9-209ENSMUST00000222316 Ccdc136Q3TVA9 1136 aa20.91■□□□□ 0.94
Trim9-209ENSMUST00000222316 ScribQ80U72 1612 aa20.82■□□□□ 0.92
Trim9-209ENSMUST00000222316 Ehmt2Q9Z148 1263 aaKnown RBP20.78■□□□□ 0.92
Trim9-209ENSMUST00000222316 Rb1cc1Q9ESK9 1588 aa20.75■□□□□ 0.91
Trim9-209ENSMUST00000222316 Dcaf1Q80TR8 1506 aa20.61■□□□□ 0.89
Trim9-209ENSMUST00000222316 Kdm5dQ62240 1548 aa20.5■□□□□ 0.87
Trim9-209ENSMUST00000222316 Rpgrip1Q9EPQ2 1331 aa20.43■□□□□ 0.86
Trim9-209ENSMUST00000222316 Baz1aO88379 1555 aa20.41■□□□□ 0.86
Trim9-209ENSMUST00000222316 HrcG5E8J6 738 aa20.41■□□□□ 0.86
Trim9-209ENSMUST00000222316 Acin1Q9JIX8 1338 aaKnown RBP20.32■□□□□ 0.84
Trim9-209ENSMUST00000222316 Trim41Q5NCC3 630 aa20.32■□□□□ 0.84
Trim9-209ENSMUST00000222316 NacadQ5SWP3 1504 aa20.2■□□□□ 0.82
Trim9-209ENSMUST00000222316 Cngb1E1AZ71 1325 aa19.95■□□□□ 0.78
Trim9-209ENSMUST00000222316 Smarca2Q6DIC0 1577 aa19.95■□□□□ 0.78
Trim9-209ENSMUST00000222316 Gab3Q8BSM5 595 aa19.88■□□□□ 0.77
Trim9-209ENSMUST00000222316 Cep164Q5DU05 1446 aa19.82■□□□□ 0.76
Trim9-209ENSMUST00000222316 Chic1Q8CBW7 227 aa19.8■□□□□ 0.76
Trim9-209ENSMUST00000222316 Sycp2Q9CUU3 1500 aa19.78■□□□□ 0.76
Trim9-209ENSMUST00000222316 Crybg2B7ZCC2 1516 aa19.77■□□□□ 0.76
Trim9-209ENSMUST00000222316 Rsf1E9PWW9 1441 aaKnown RBP19.68■□□□□ 0.74
Trim9-209ENSMUST00000222316 Pcgf6Q99NA9 353 aa19.67■□□□□ 0.74
Trim9-209ENSMUST00000222316 Cecr2E9Q2Z1 1453 aa19.66■□□□□ 0.74
Trim9-209ENSMUST00000222316 Brd4Q9ESU6 1400 aaKnown RBP19.55■□□□□ 0.72
Trim9-209ENSMUST00000222316 Esf1Q3V1V3 845 aaKnown RBP19.55■□□□□ 0.72
Trim9-209ENSMUST00000222316 Ccdc88bQ4QRL3 1481 aa19.55■□□□□ 0.72
Trim9-209ENSMUST00000222316 Synj1Q8CHC4 1574 aa19.46■□□□□ 0.71
Trim9-209ENSMUST00000222316 Supt5hO55201 1082 aaKnown RBP19.44■□□□□ 0.7
Trim9-209ENSMUST00000222316 Golga3P55937 1487 aa19.43■□□□□ 0.7
Trim9-209ENSMUST00000222316 BicraF8VPZ9 1578 aa19.38■□□□□ 0.69
Trim9-209ENSMUST00000222316 Zeb1Q64318 1117 aa19.36■□□□□ 0.69
Trim9-209ENSMUST00000222316 CftrP26361 1476 aa19.27■□□□□ 0.68
Trim9-209ENSMUST00000222316 Mier1Q5UAK0 511 aa19.26■□□□□ 0.67
Trim9-209ENSMUST00000222316 UbtfP25976 765 aaKnown RBP19.11■□□□□ 0.65
Trim9-209ENSMUST00000222316 Myt1lP97500 1187 aa19.11■□□□□ 0.65
Trim9-209ENSMUST00000222316 Cc2d2aQ8CFW7 1633 aa19.09■□□□□ 0.65
Trim9-209ENSMUST00000222316 Top2bQ64511 1612 aa19.08■□□□□ 0.64
Trim9-209ENSMUST00000222316 Cttnbp2B9EJA2 1648 aa19.06■□□□□ 0.64
Trim9-209ENSMUST00000222316 NefmP08553 848 aa19.03■□□□□ 0.64
Trim9-209ENSMUST00000222316 Smarca4Q3TKT4 1613 aaKnown RBP18.97■□□□□ 0.63
Trim9-209ENSMUST00000222316 Npm2Q80W85 207 aa18.93■□□□□ 0.62
Trim9-209ENSMUST00000222316 Sall2Q9QX96 1004 aa18.91■□□□□ 0.62
Trim9-209ENSMUST00000222316 Neurod1Q60867 357 aa18.9■□□□□ 0.62
Trim9-209ENSMUST00000222316 Rapgef2Q8CHG7 1496 aa18.85■□□□□ 0.61
Trim9-209ENSMUST00000222316 Fmn1Q05860 1466 aa18.83■□□□□ 0.61
Trim9-209ENSMUST00000222316 Wdr66E9Q743 1299 aa18.81■□□□□ 0.6
Trim9-209ENSMUST00000222316 Ppargc1bQ8VHJ7 1014 aa18.8■□□□□ 0.6
Trim9-209ENSMUST00000222316 Cep162Q6ZQ06 1403 aa18.78■□□□□ 0.6
Trim9-209ENSMUST00000222316 Top2aQ01320 1528 aaKnown RBP18.78■□□□□ 0.6
Trim9-209ENSMUST00000222316 Plekhg3Q4VAC9 1341 aa18.78■□□□□ 0.6
Trim9-209ENSMUST00000222316 Iqgap2Q3UQ44 1575 aa18.76■□□□□ 0.59
Trim9-209ENSMUST00000222316 Aebp2Q9Z248 504 aaKnown RBP18.73■□□□□ 0.59
Trim9-209ENSMUST00000222316 Il27Q8K3I6 234 aa18.71■□□□□ 0.59
Trim9-209ENSMUST00000222316 Las1lA2BE28 776 aaKnown RBP18.69■□□□□ 0.58
Trim9-209ENSMUST00000222316 Clip1Q922J3 1391 aa18.64■□□□□ 0.57
Trim9-209ENSMUST00000222316 Ap3b1Q9Z1T1 1105 aa18.63■□□□□ 0.57
Trim9-209ENSMUST00000222316 Atad2bE9Q166 1460 aaKnown RBP18.55■□□□□ 0.56
Trim9-209ENSMUST00000222316 TonslQ6NZL6 1363 aa18.48■□□□□ 0.55
Trim9-209ENSMUST00000222316 PtprkP35822 1457 aa18.48■□□□□ 0.55
Trim9-209ENSMUST00000222316 Pds5bQ4VA53 1446 aaKnown RBP18.43■□□□□ 0.54
Trim9-209ENSMUST00000222316 Eid3Q3V124 375 aa18.42■□□□□ 0.54
Trim9-209ENSMUST00000222316 Arhgap35Q91YM2 1499 aa18.41■□□□□ 0.54
Trim9-209ENSMUST00000222316 ClspnQ80YR7 1315 aa18.41■□□□□ 0.54
Trim9-209ENSMUST00000222316 Eif4g1Q6NZJ6 1600 aaKnown RBP18.41■□□□□ 0.54
Trim9-209ENSMUST00000222316 Kif15Q6P9L6 1387 aa18.4■□□□□ 0.54
Trim9-209ENSMUST00000222316 Frmpd1A2AKB4 1549 aa18.39■□□□□ 0.53
Trim9-209ENSMUST00000222316 TnnQ80Z71 1560 aa18.37■□□□□ 0.53
Trim9-209ENSMUST00000222316 Nop58Q6DFW4 536 aaKnown RBP18.35■□□□□ 0.53
Trim9-209ENSMUST00000222316 Arap1Q4LDD4 1452 aa18.33■□□□□ 0.53
Trim9-209ENSMUST00000222316 Ncapd3Q6ZQK0 1506 aa18.33■□□□□ 0.52
Trim9-209ENSMUST00000222316 Csrnp3P59055 597 aa18.32■□□□□ 0.52
Trim9-209ENSMUST00000222316 Setd5Q5XJV7 1441 aa18.32■□□□□ 0.52
Trim9-209ENSMUST00000222316 Cdk11bP24788 784 aaKnown RBP18.31■□□□□ 0.52
Trim9-209ENSMUST00000222316 Eea1Q8BL66 1411 aa18.31■□□□□ 0.52
Trim9-209ENSMUST00000222316 Wdr62Q3U3T8 1523 aa18.3■□□□□ 0.52
Trim9-209ENSMUST00000222316 Anks4bQ8K3X6 423 aa18.28■□□□□ 0.52
Trim9-209ENSMUST00000222316 NrkQ9R0G8 1455 aa18.24■□□□□ 0.51
Trim9-209ENSMUST00000222316 Lmod2Q3UHZ5 550 aa18.23■□□□□ 0.51
Trim9-209ENSMUST00000222316 Lamc3Q9R0B6 1581 aa18.22■□□□□ 0.51
Trim9-209ENSMUST00000222316 Shroom4Q1W617 1475 aa18.21■□□□□ 0.51
Trim9-209ENSMUST00000222316 Ercc6F8VPZ5 1481 aa18.2■□□□□ 0.5
Trim9-209ENSMUST00000222316 Fam50aQ9WV03 339 aaKnown RBP18.19■□□□□ 0.5
Trim9-209ENSMUST00000222316 Camsap1A2AHC3 1581 aa18.19■□□□□ 0.5
Trim9-209ENSMUST00000222316 Arhgef5E9Q7D5 1581 aa18.17■□□□□ 0.5
Trim9-209ENSMUST00000222316 Mapk8ip2Q9ERE9 830 aa18.16■□□□□ 0.5
Trim9-209ENSMUST00000222316 BlmO88700 1416 aa18.16■□□□□ 0.5
Trim9-209ENSMUST00000222316 1700123L14RikQ3V2K7 440 aa18.15■□□□□ 0.5
Trim9-209ENSMUST00000222316 Unc13aQ4KUS2 1712 aa18.14■□□□□ 0.49
Trim9-209ENSMUST00000222316 Baz1bQ9Z277 1479 aa18.14■□□□□ 0.49
Trim9-209ENSMUST00000222316 AqrQ8CFQ3 1481 aaKnown RBP18.13■□□□□ 0.49
Trim9-209ENSMUST00000222316 Ccdc18Q640L5 1455 aa18.12■□□□□ 0.49
Trim9-209ENSMUST00000222316 Gm38655A0A286YDK6 273 aa18.11■□□□□ 0.49
Trim9-209ENSMUST00000222316 Grin2bQ01097 1482 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms