RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Tubgcp6G5E8P0 1769 aa33.5■■■□□ 2.95
Pcf11-205ENSMUST00000208255 Cep170bQ80U49 1574 aa33.5■■■□□ 2.95
Pcf11-205ENSMUST00000208255 Thsd7aQ69ZU6 1645 aa33.47■■■□□ 2.95
Pcf11-205ENSMUST00000208255 Tns3Q5SSZ5 1440 aa33.38■■■□□ 2.93
Pcf11-205ENSMUST00000208255 CenpjQ569L8 1344 aa33.38■■■□□ 2.93
Pcf11-205ENSMUST00000208255 Gm16486A0A1D5RMD1 1434 aa33.38■■■□□ 2.93
Pcf11-205ENSMUST00000208255 Atp2b2Q9R0K7 1198 aa33.37■■■□□ 2.93
Pcf11-205ENSMUST00000208255 Sbno1Q689Z5 1390 aa33.35■■■□□ 2.93
Pcf11-205ENSMUST00000208255 Mink1Q9JM52 1308 aa33.32■■■□□ 2.92
Pcf11-205ENSMUST00000208255 Smg6P61406 1418 aaKnown RBP33.32■■■□□ 2.92
Pcf11-205ENSMUST00000208255 Abca14E9Q8F8 1683 aa33.31■■■□□ 2.92
Pcf11-205ENSMUST00000208255 Nwd1A6H603 1563 aa33.3■■■□□ 2.92
Pcf11-205ENSMUST00000208255 Q3UJC8 639 aa33.28■■■□□ 2.92
Pcf11-205ENSMUST00000208255 Rreb1Q3UH06 1700 aaKnown RBP33.27■■■□□ 2.92
Pcf11-205ENSMUST00000208255 Tmem94Q7TSH8 1360 aa33.25■■■□□ 2.91
Pcf11-205ENSMUST00000208255 Usp32F8VPZ3 1604 aa33.25■■■□□ 2.91
Pcf11-205ENSMUST00000208255 Unc13bQ9Z1N9 1602 aa33.25■■■□□ 2.91
Pcf11-205ENSMUST00000208255 Gli3Q61602 1583 aa33.25■■■□□ 2.91
Pcf11-205ENSMUST00000208255 PrxO55103 1391 aa33.23■■■□□ 2.91
Pcf11-205ENSMUST00000208255 Slc24a1Q91WD8 1130 aa33.23■■■□□ 2.91
Pcf11-205ENSMUST00000208255 InsrP15208 1372 aa33.23■■■□□ 2.91
Pcf11-205ENSMUST00000208255 Kif20bQ80WE4 1774 aaKnown RBP33.23■■■□□ 2.91
Pcf11-205ENSMUST00000208255 Cdk19Q8BWD8 501 aa33.19■■■□□ 2.9
Pcf11-205ENSMUST00000208255 Col18a1P39061 1774 aa33.19■■■□□ 2.9
Pcf11-205ENSMUST00000208255 Col14a1Q80X19 1797 aa33.18■■■□□ 2.9
Pcf11-205ENSMUST00000208255 Slain2Q8CI08 581 aa33.17■■■□□ 2.9
Pcf11-205ENSMUST00000208255 Gsto1O09131 240 aa33.16■■■□□ 2.9
Pcf11-205ENSMUST00000208255 D430041D05RikF6ZGR6 1678 aa33.16■■■□□ 2.9
Pcf11-205ENSMUST00000208255 Pik3c2bE9QAN8 1632 aa33.14■■■□□ 2.9
Pcf11-205ENSMUST00000208255 Pank3Q8R2W9 370 aa33.14■■■□□ 2.9
Pcf11-205ENSMUST00000208255 NktrP30415 1453 aa33.14■■■□□ 2.9
Pcf11-205ENSMUST00000208255 Gm10563F6WIE4 79 aa33.13■■■□□ 2.89
Pcf11-205ENSMUST00000208255 Slc4a1apE9PX68 744 aa33.11■■■□□ 2.89
Pcf11-205ENSMUST00000208255 Sirt1Q923E4 737 aa33.11■■■□□ 2.89
Pcf11-205ENSMUST00000208255 Exosc9Q9JHI7 438 aaKnown RBP33.11■■■□□ 2.89
Pcf11-205ENSMUST00000208255 Tmf1B9EKI3 1091 aa33.1■■■□□ 2.89
Pcf11-205ENSMUST00000208255 NalcnQ8BXR5 1738 aa33.09■■■□□ 2.89
Pcf11-205ENSMUST00000208255 Evi5lH3BKQ3 813 aa33.08■■■□□ 2.89
Pcf11-205ENSMUST00000208255 Fam184bQ0KK56 942 aa33.07■■■□□ 2.88
Pcf11-205ENSMUST00000208255 FanciQ8K368 1330 aa33.07■■■□□ 2.88
Pcf11-205ENSMUST00000208255 C3P01027 1663 aa33.06■■■□□ 2.88
Pcf11-205ENSMUST00000208255 Inpp5dQ9ES52 1191 aa33.05■■■□□ 2.88
Pcf11-205ENSMUST00000208255 C5P06684 1680 aa33.05■■■□□ 2.88
Pcf11-205ENSMUST00000208255 Nop58Q6DFW4 536 aaKnown RBP33.04■■■□□ 2.88
Pcf11-205ENSMUST00000208255 Als2Q920R0 1651 aa33.03■■■□□ 2.88
Pcf11-205ENSMUST00000208255 Amigo3Q8C2S7 508 aa33.02■■■□□ 2.88
Pcf11-205ENSMUST00000208255 Zscan10Q3URR7 782 aa33.02■■■□□ 2.88
Pcf11-205ENSMUST00000208255 Cnga1P29974 684 aa32.99■■■□□ 2.87
Pcf11-205ENSMUST00000208255 Zranb1Q7M760 708 aa32.99■■■□□ 2.87
Pcf11-205ENSMUST00000208255 Tnrc6bQ8BKI2 1810 aaKnown RBP32.98■■■□□ 2.87
Pcf11-205ENSMUST00000208255 Atf3Q60765 181 aa32.97■■■□□ 2.87
Pcf11-205ENSMUST00000208255 Idi2Q8BFZ6 227 aa32.94■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Idi1P58044 227 aa32.93■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Brinp3Q499E0 766 aa32.92■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Znf316Q6PGE4 1016 aa32.92■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Iqsec2Q5DU25 1478 aa32.92■■■□□ 2.86
Pcf11-205ENSMUST00000208255 PtpruB1AUH1 1446 aa32.91■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Abcc10Q8R4P9 1501 aa32.91■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Exoc6Q8R313 802 aa32.91■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Wwc2Q6NXJ0 1187 aa32.9■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Map3k19E9Q3S4 1311 aa32.89■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Sipa1l2Q80TE4 1722 aa32.89■■■□□ 2.86
Pcf11-205ENSMUST00000208255 Ap3b2Q9JME5 1082 aa32.88■■■□□ 2.85
Pcf11-205ENSMUST00000208255 N4bp2F8VQG7 1678 aaKnown RBP32.87■■■□□ 2.85
Pcf11-205ENSMUST00000208255 Sox12Q04890 314 aa32.87■■■□□ 2.85
Pcf11-205ENSMUST00000208255 Nrxn1Q9CS84 1514 aa32.86■■■□□ 2.85
Pcf11-205ENSMUST00000208255 NgefQ8CHT1 710 aa32.85■■■□□ 2.85
Pcf11-205ENSMUST00000208255 Adgrl1Q80TR1 1466 aa32.85■■■□□ 2.85
Pcf11-205ENSMUST00000208255 Gprasp1Q5U4C1 1347 aa32.85■■■□□ 2.85
Pcf11-205ENSMUST00000208255 CatipB9EKE5 520 aa32.84■■■□□ 2.85
Pcf11-205ENSMUST00000208255 Tmem2Q5FWI3 1383 aa32.84■■■□□ 2.85
Pcf11-205ENSMUST00000208255 PnisrA2AJT4 805 aaKnown RBP32.81■■■□□ 2.84
Pcf11-205ENSMUST00000208255 Mon2Q80TL7 1715 aa32.81■■■□□ 2.84
Pcf11-205ENSMUST00000208255 Kcna6Q61923 529 aa32.8■■■□□ 2.84
Pcf11-205ENSMUST00000208255 Mrs2Q5NCE8 434 aa32.78■■■□□ 2.84
Pcf11-205ENSMUST00000208255 Wnk3Q80XP9 1757 aa32.77■■■□□ 2.84
Pcf11-205ENSMUST00000208255 Znf335A2A5K6 1337 aa32.76■■■□□ 2.83
Pcf11-205ENSMUST00000208255 Farp2Q91VS8 1065 aa32.75■■■□□ 2.83
Pcf11-205ENSMUST00000208255 Camta1A2A891 1682 aa32.74■■■□□ 2.83
Pcf11-205ENSMUST00000208255 KdrP35918 1367 aa32.74■■■□□ 2.83
Pcf11-205ENSMUST00000208255 Dcaf11Q91VU6 549 aa32.72■■■□□ 2.83
Pcf11-205ENSMUST00000208255 Bcl11bQ99PV8 884 aa32.72■■■□□ 2.83
Pcf11-205ENSMUST00000208255 Kif7B7ZNG0 1348 aa32.72■■■□□ 2.83
Pcf11-205ENSMUST00000208255 Slc4a2P13808 1237 aaKnown RBP32.71■■■□□ 2.83
Pcf11-205ENSMUST00000208255 Tex14Q7M6U3 1450 aa32.71■■■□□ 2.83
Pcf11-205ENSMUST00000208255 NinlQ6ZQ12 1394 aa32.69■■■□□ 2.82
Pcf11-205ENSMUST00000208255 DccP70211 1447 aa32.68■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Hspa1lP16627 641 aa32.68■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Anp32bQ9EST5 272 aaKnown RBP32.68■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Kif1aP33173 1695 aa32.67■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Rpgrip1lQ8CG73 1264 aa32.65■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Rab3gap2Q8BMG7 1366 aa32.65■■■□□ 2.82
Pcf11-205ENSMUST00000208255 GnpatP98192 678 aa32.65■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Ppp2r1aQ76MZ3 589 aa32.65■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Prdm10Q3UTQ7 1184 aa32.64■■■□□ 2.82
Pcf11-205ENSMUST00000208255 Gimap5Q8BWF2 308 aa32.63■■■□□ 2.81
Pcf11-205ENSMUST00000208255 Kif16bB1AVY7 1312 aa32.63■■■□□ 2.81
Pcf11-205ENSMUST00000208255 Wdr17E9Q271 1322 aa32.63■■■□□ 2.81
Pcf11-205ENSMUST00000208255 Ttll13A4Q9F6 804 aa32.56■■■□□ 2.8
Pcf11-205ENSMUST00000208255 Fyb1O35601 819 aa32.56■■■□□ 2.8
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms