RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Atf3Q60765 181 aa23■■□□□ 1.27
Msh3-205ENSMUST00000187424 Cep152A2AUM9 1736 aaKnown RBP22.99■■□□□ 1.27
Msh3-205ENSMUST00000187424 Ifit1bl1D3Z6F0 470 aa22.99■■□□□ 1.27
Msh3-205ENSMUST00000187424 Shq1Q7TMX5 569 aa22.99■■□□□ 1.27
Msh3-205ENSMUST00000187424 Q9D9H8 365 aa22.99■■□□□ 1.27
Msh3-205ENSMUST00000187424 Atp1b4Q99ME6 356 aa22.98■■□□□ 1.27
Msh3-205ENSMUST00000187424 DccP70211 1447 aa22.97■■□□□ 1.27
Msh3-205ENSMUST00000187424 N4bp2F8VQG7 1678 aaKnown RBP22.97■■□□□ 1.27
Msh3-205ENSMUST00000187424 Ildr2B5TVM2 661 aa22.96■■□□□ 1.27
Msh3-205ENSMUST00000187424 Pik3c2bE9QAN8 1632 aa22.95■■□□□ 1.26
Msh3-205ENSMUST00000187424 Sipa1l2Q80TE4 1722 aa22.95■■□□□ 1.26
Msh3-205ENSMUST00000187424 Kif20bQ80WE4 1774 aaKnown RBP22.95■■□□□ 1.26
Msh3-205ENSMUST00000187424 Grwd1Q810D6 446 aaKnown RBP22.95■■□□□ 1.26
Msh3-205ENSMUST00000187424 Cdk5rap2Q8K389 1822 aa22.95■■□□□ 1.26
Msh3-205ENSMUST00000187424 Rgs17Q9QZB0 210 aa22.95■■□□□ 1.26
Msh3-205ENSMUST00000187424 Kif24Q6NWW5 1356 aa22.93■■□□□ 1.26
Msh3-205ENSMUST00000187424 HnrnpmQ9D0E1 729 aaKnown RBP22.92■■□□□ 1.26
Msh3-205ENSMUST00000187424 Rreb1Q3UH06 1700 aaKnown RBP22.91■■□□□ 1.26
Msh3-205ENSMUST00000187424 Kdm2aP59997 1161 aa22.9■■□□□ 1.26
Msh3-205ENSMUST00000187424 Dmrt2Q8BG36 561 aa22.9■■□□□ 1.26
Msh3-205ENSMUST00000187424 Slc52a2Q9D8F3 450 aa22.9■■□□□ 1.26
Msh3-205ENSMUST00000187424 Polr3aB2RXC6 1390 aa22.89■■□□□ 1.25
Msh3-205ENSMUST00000187424 Acin1Q9JIX8 1338 aaKnown RBP22.88■■□□□ 1.25
Msh3-205ENSMUST00000187424 D430041D05RikF6ZGR6 1678 aa22.87■■□□□ 1.25
Msh3-205ENSMUST00000187424 Fan1Q69ZT1 1020 aa22.87■■□□□ 1.25
Msh3-205ENSMUST00000187424 Cpsf1Q9EPU4 1441 aaKnown RBP22.86■■□□□ 1.25
Msh3-205ENSMUST00000187424 Mug2P28666 1451 aa22.85■■□□□ 1.25
Msh3-205ENSMUST00000187424 Srpk2O54781 681 aaKnown RBP22.85■■□□□ 1.25
Msh3-205ENSMUST00000187424 Neurod1Q60867 357 aa22.85■■□□□ 1.25
Msh3-205ENSMUST00000187424 Sipa1l1Q8C0T5 1782 aa22.85■■□□□ 1.25
Msh3-205ENSMUST00000187424 Usp32F8VPZ3 1604 aa22.85■■□□□ 1.25
Msh3-205ENSMUST00000187424 Lrrc7Q80TE7 1490 aa22.85■■□□□ 1.25
Msh3-205ENSMUST00000187424 Puf60Q3UEB3 564 aaKnown RBP22.83■■□□□ 1.25
Msh3-205ENSMUST00000187424 Cep170bQ80U49 1574 aa22.81■■□□□ 1.24
Msh3-205ENSMUST00000187424 Gm20521D3Z5F7 333 aa22.81■■□□□ 1.24
Msh3-205ENSMUST00000187424 NefmP08553 848 aa22.81■■□□□ 1.24
Msh3-205ENSMUST00000187424 Os9Q8K2C7 672 aa22.81■■□□□ 1.24
Msh3-205ENSMUST00000187424 Tex14Q7M6U3 1450 aa22.8■■□□□ 1.24
Msh3-205ENSMUST00000187424 Ddx17Q501J6 650 aaKnown RBP22.8■■□□□ 1.24
Msh3-205ENSMUST00000187424 Camta1A2A891 1682 aa22.78■■□□□ 1.24
Msh3-205ENSMUST00000187424 C5P06684 1680 aa22.78■■□□□ 1.24
Msh3-205ENSMUST00000187424 Stk26Q99JT2 416 aa22.78■■□□□ 1.24
Msh3-205ENSMUST00000187424 Als2Q920R0 1651 aa22.77■■□□□ 1.24
Msh3-205ENSMUST00000187424 Ggt6Q6PDE7 497 aa22.76■■□□□ 1.23
Msh3-205ENSMUST00000187424 Utp14aQ640M1 767 aaKnown RBP22.75■■□□□ 1.23
Msh3-205ENSMUST00000187424 TonslQ6NZL6 1363 aa22.75■■□□□ 1.23
Msh3-205ENSMUST00000187424 Fam135bQ9DAI6 1403 aa22.74■■□□□ 1.23
Msh3-205ENSMUST00000187424 RalgapbQ8BQZ4 1484 aa22.73■■□□□ 1.23
Msh3-205ENSMUST00000187424 MpndQ3TV65 487 aa22.73■■□□□ 1.23
Msh3-205ENSMUST00000187424 Gm10563F6WIE4 79 aa22.71■■□□□ 1.23
Msh3-205ENSMUST00000187424 Kcna6Q61923 529 aa22.71■■□□□ 1.23
Msh3-205ENSMUST00000187424 Plekhg1F6S200 1446 aa22.71■■□□□ 1.23
Msh3-205ENSMUST00000187424 GnpatP98192 678 aa22.7■■□□□ 1.22
Msh3-205ENSMUST00000187424 Smim5Q8BT42 78 aa22.7■■□□□ 1.22
Msh3-205ENSMUST00000187424 Ppargc1bQ8VHJ7 1014 aa22.7■■□□□ 1.22
Msh3-205ENSMUST00000187424 Robo1O89026 1612 aa22.7■■□□□ 1.22
Msh3-205ENSMUST00000187424 Kif1aP33173 1695 aa22.7■■□□□ 1.22
Msh3-205ENSMUST00000187424 Nphp4P59240 1425 aa22.68■■□□□ 1.22
Msh3-205ENSMUST00000187424 Usp40Q8BWR4 1235 aa22.68■■□□□ 1.22
Msh3-205ENSMUST00000187424 Emilin2Q8K482 1074 aa22.68■■□□□ 1.22
Msh3-205ENSMUST00000187424 Abca14E9Q8F8 1683 aa22.68■■□□□ 1.22
Msh3-205ENSMUST00000187424 Atp7bQ64446 1462 aa22.66■■□□□ 1.22
Msh3-205ENSMUST00000187424 Farp2Q91VS8 1065 aa22.65■■□□□ 1.22
Msh3-205ENSMUST00000187424 Tnks1bp1P58871 1720 aa22.65■■□□□ 1.22
Msh3-205ENSMUST00000187424 Q3UJC8 639 aa22.63■■□□□ 1.21
Msh3-205ENSMUST00000187424 Rundc1Q0VDN7 615 aa22.62■■□□□ 1.21
Msh3-205ENSMUST00000187424 Abca15E9PWH4 1668 aa22.62■■□□□ 1.21
Msh3-205ENSMUST00000187424 Atp10bB1AWN4 1474 aa22.61■■□□□ 1.21
Msh3-205ENSMUST00000187424 IqubQ8CDK3 788 aa22.61■■□□□ 1.21
Msh3-205ENSMUST00000187424 Tmem2Q5FWI3 1383 aa22.6■■□□□ 1.21
Msh3-205ENSMUST00000187424 Stag3O70576 1240 aa22.59■■□□□ 1.21
Msh3-205ENSMUST00000187424 Arhgef1Q61210 920 aaKnown RBP22.58■■□□□ 1.21
Msh3-205ENSMUST00000187424 Tnrc6cQ3UHC0 1690 aaKnown RBP22.58■■□□□ 1.2
Msh3-205ENSMUST00000187424 Card11Q8CIS0 1159 aa22.57■■□□□ 1.2
Msh3-205ENSMUST00000187424 Gtf2e1Q9D0D5 440 aa22.57■■□□□ 1.2
Msh3-205ENSMUST00000187424 Mink1Q9JM52 1308 aa22.56■■□□□ 1.2
Msh3-205ENSMUST00000187424 Atp2b2Q9R0K7 1198 aa22.55■■□□□ 1.2
Msh3-205ENSMUST00000187424 Eno4Q8C042 619 aa22.54■■□□□ 1.2
Msh3-205ENSMUST00000187424 Stard8Q8K031 1019 aa22.54■■□□□ 1.2
Msh3-205ENSMUST00000187424 Srcin1Q9QWI6 1250 aa22.54■■□□□ 1.2
Msh3-205ENSMUST00000187424 Gm16486A0A1D5RMD1 1434 aa22.54■■□□□ 1.2
Msh3-205ENSMUST00000187424 Pola1P33609 1465 aa22.54■■□□□ 1.2
Msh3-205ENSMUST00000187424 Zbtb4Q5F293 982 aa22.53■■□□□ 1.2
Msh3-205ENSMUST00000187424 Lrrc59Q922Q8 307 aaKnown RBP22.53■■□□□ 1.2
Msh3-205ENSMUST00000187424 PtpruB1AUH1 1446 aa22.52■■□□□ 1.2
Msh3-205ENSMUST00000187424 NktrP30415 1453 aa22.52■■□□□ 1.2
Msh3-205ENSMUST00000187424 Ccdc6D3YZP9 469 aa22.51■■□□□ 1.19
Msh3-205ENSMUST00000187424 Shank2Q80Z38 1476 aa22.51■■□□□ 1.19
Msh3-205ENSMUST00000187424 Ltbp1Q8CG19 1712 aa22.51■■□□□ 1.19
Msh3-205ENSMUST00000187424 InhbeO08717 350 aa22.5■■□□□ 1.19
Msh3-205ENSMUST00000187424 Idi1P58044 227 aa22.49■■□□□ 1.19
Msh3-205ENSMUST00000187424 Rpgrip1Q9EPQ2 1331 aa22.49■■□□□ 1.19
Msh3-205ENSMUST00000187424 Rock2P70336 1388 aa22.49■■□□□ 1.19
Msh3-205ENSMUST00000187424 VirmaA2AIV2 1811 aaKnown RBP22.47■■□□□ 1.19
Msh3-205ENSMUST00000187424 Nrxn1Q9CS84 1514 aa22.46■■□□□ 1.19
Msh3-205ENSMUST00000187424 Ddx54Q8K4L0 874 aaKnown RBP22.45■■□□□ 1.18
Msh3-205ENSMUST00000187424 Acsbg1Q99PU5 721 aa22.45■■□□□ 1.18
Msh3-205ENSMUST00000187424 Kdm2bQ6P1G2 1309 aa22.45■■□□□ 1.18
Msh3-205ENSMUST00000187424 CenpjQ569L8 1344 aa22.43■■□□□ 1.18
Msh3-205ENSMUST00000187424 Ly75Q60767 1723 aa22.43■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms