RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ofd1Q80Z25 1017 aa21.3■■□□□ 1
Trim39-203ENSMUST00000113706 Kif7B7ZNG0 1348 aa21.3■■□□□ 1
Trim39-203ENSMUST00000113706 Eif2ak4Q9QZ05 1648 aa21.29■■□□□ 1
Trim39-203ENSMUST00000113706 P3h3Q8CG70 732 aa21.29■■□□□ 1
Trim39-203ENSMUST00000113706 Dcaf11Q91VU6 549 aa21.28■■□□□ 1
Trim39-203ENSMUST00000113706 PplQ9R269 1755 aa21.27■■□□□ 1
Trim39-203ENSMUST00000113706 Gprasp1Q5U4C1 1347 aa21.25■□□□□ 0.99
Trim39-203ENSMUST00000113706 Chd2E9PZM4 1827 aaKnown RBP21.24■□□□□ 0.99
Trim39-203ENSMUST00000113706 Abca14E9Q8F8 1683 aa21.23■□□□□ 0.99
Trim39-203ENSMUST00000113706 Mak16Q8BGS0 296 aaKnown RBP21.23■□□□□ 0.99
Trim39-203ENSMUST00000113706 Dip2aQ8BWT5 1523 aa21.22■□□□□ 0.99
Trim39-203ENSMUST00000113706 Utp14aQ640M1 767 aaKnown RBP21.21■□□□□ 0.99
Trim39-203ENSMUST00000113706 Prdm10Q3UTQ7 1184 aa21.21■□□□□ 0.99
Trim39-203ENSMUST00000113706 Mink1Q9JM52 1308 aa21.21■□□□□ 0.99
Trim39-203ENSMUST00000113706 Asxl2Q8BZ32 1370 aa21.2■□□□□ 0.98
Trim39-203ENSMUST00000113706 Plekhg1F6S200 1446 aa21.19■□□□□ 0.98
Trim39-203ENSMUST00000113706 Anp32aO35381 247 aa21.19■□□□□ 0.98
Trim39-203ENSMUST00000113706 L3mbtl2P59178 703 aa21.19■□□□□ 0.98
Trim39-203ENSMUST00000113706 Safb2Q80YR5 991 aaKnown RBP21.18■□□□□ 0.98
Trim39-203ENSMUST00000113706 Atf7ipQ7TT18 1306 aa21.18■□□□□ 0.98
Trim39-203ENSMUST00000113706 Gemin5Q8BX17 1502 aaKnown RBP21.17■□□□□ 0.98
Trim39-203ENSMUST00000113706 Txndc2Q6P902 515 aa21.16■□□□□ 0.98
Trim39-203ENSMUST00000113706 Zranb1Q7M760 708 aa21.16■□□□□ 0.98
Trim39-203ENSMUST00000113706 Exosc9Q9JHI7 438 aaKnown RBP21.16■□□□□ 0.98
Trim39-203ENSMUST00000113706 Nrxn1Q9CS84 1514 aa21.16■□□□□ 0.98
Trim39-203ENSMUST00000113706 KdrP35918 1367 aa21.16■□□□□ 0.98
Trim39-203ENSMUST00000113706 Nolc1E9Q5C9 702 aaKnown RBP21.15■□□□□ 0.98
Trim39-203ENSMUST00000113706 Esx1O88933 382 aa21.15■□□□□ 0.98
Trim39-203ENSMUST00000113706 Psme1P97371 249 aa21.15■□□□□ 0.98
Trim39-203ENSMUST00000113706 Atp2b2Q9R0K7 1198 aa21.15■□□□□ 0.98
Trim39-203ENSMUST00000113706 Nwd1A6H603 1563 aa21.15■□□□□ 0.98
Trim39-203ENSMUST00000113706 Zfp444Q3TDV8 331 aaKnown RBP21.14■□□□□ 0.98
Trim39-203ENSMUST00000113706 NktrP30415 1453 aa21.14■□□□□ 0.97
Trim39-203ENSMUST00000113706 Fam71e1A1L3C1 212 aa21.14■□□□□ 0.97
Trim39-203ENSMUST00000113706 Dip2bQ3UH60 1574 aa21.12■□□□□ 0.97
Trim39-203ENSMUST00000113706 Nlrp6Q91WS2 869 aa21.12■□□□□ 0.97
Trim39-203ENSMUST00000113706 IghaA0A0A6YXW6 389 aa21.1■□□□□ 0.97
Trim39-203ENSMUST00000113706 Gsto1O09131 240 aa21.1■□□□□ 0.97
Trim39-203ENSMUST00000113706 Scaf11E9PZM7 1456 aaKnown RBP21.1■□□□□ 0.97
Trim39-203ENSMUST00000113706 Erbb3Q61526 1339 aa21.1■□□□□ 0.97
Trim39-203ENSMUST00000113706 Cdk19Q8BWD8 501 aa21.1■□□□□ 0.97
Trim39-203ENSMUST00000113706 Kank1E9Q238 1360 aa21.09■□□□□ 0.97
Trim39-203ENSMUST00000113706 Rad21Q61550 635 aaKnown RBP21.08■□□□□ 0.97
Trim39-203ENSMUST00000113706 Slit3Q9WVB4 1523 aa21.08■□□□□ 0.96
Trim39-203ENSMUST00000113706 Pcdh10E9PXQ7 1057 aa21.07■□□□□ 0.96
Trim39-203ENSMUST00000113706 Wdr43Q6ZQL4 677 aaKnown RBP21.06■□□□□ 0.96
Trim39-203ENSMUST00000113706 Kiaa1107Q80TK0 1369 aa21.05■□□□□ 0.96
Trim39-203ENSMUST00000113706 Adgrl1Q80TR1 1466 aa21.05■□□□□ 0.96
Trim39-203ENSMUST00000113706 IbtkQ6ZPR6 1352 aaKnown RBP21.04■□□□□ 0.96
Trim39-203ENSMUST00000113706 CrbnQ8C7D2 445 aa21.03■□□□□ 0.96
Trim39-203ENSMUST00000113706 Cps1Q8C196 1500 aa21.03■□□□□ 0.96
Trim39-203ENSMUST00000113706 Ppp4r2Q0VGB7 417 aa21.02■□□□□ 0.96
Trim39-203ENSMUST00000113706 Cald1E9QA15 768 aaKnown RBP21.02■□□□□ 0.96
Trim39-203ENSMUST00000113706 Usp19Q3UJD6 1360 aa21.02■□□□□ 0.96
Trim39-203ENSMUST00000113706 Kif16bB1AVY7 1312 aa21.02■□□□□ 0.95
Trim39-203ENSMUST00000113706 P2rx7Q9Z1M0 595 aa21.01■□□□□ 0.95
Trim39-203ENSMUST00000113706 FanciQ8K368 1330 aa21.01■□□□□ 0.95
Trim39-203ENSMUST00000113706 4930407I10RikD3Z5T8 1512 aa21.01■□□□□ 0.95
Trim39-203ENSMUST00000113706 PzpQ61838 1495 aa21■□□□□ 0.95
Trim39-203ENSMUST00000113706 NinlQ6ZQ12 1394 aa21■□□□□ 0.95
Trim39-203ENSMUST00000113706 Usp32F8VPZ3 1604 aa21■□□□□ 0.95
Trim39-203ENSMUST00000113706 Map3k19E9Q3S4 1311 aa20.95■□□□□ 0.94
Trim39-203ENSMUST00000113706 Pik3c2bE9QAN8 1632 aa20.95■□□□□ 0.94
Trim39-203ENSMUST00000113706 Golga2Q921M4 999 aa20.95■□□□□ 0.94
Trim39-203ENSMUST00000113706 Arap3Q8R5G7 1538 aa20.95■□□□□ 0.94
Trim39-203ENSMUST00000113706 Kcnh8P59111 1102 aa20.95■□□□□ 0.94
Trim39-203ENSMUST00000113706 GsdmaQ9EST1 446 aa20.94■□□□□ 0.94
Trim39-203ENSMUST00000113706 Dnajc5P60904 198 aa20.93■□□□□ 0.94
Trim39-203ENSMUST00000113706 HnrnpmQ9D0E1 729 aaKnown RBP20.93■□□□□ 0.94
Trim39-203ENSMUST00000113706 Pik3r4Q8VD65 1358 aa20.92■□□□□ 0.94
Trim39-203ENSMUST00000113706 Supt16hQ920B9 1047 aa20.91■□□□□ 0.94
Trim39-203ENSMUST00000113706 Upf2A2AT37 1269 aaKnown RBP20.91■□□□□ 0.94
Trim39-203ENSMUST00000113706 Bcl9Q9D219 1425 aa20.91■□□□□ 0.94
Trim39-203ENSMUST00000113706 Speer4f1Q9D5Q6 258 aa20.9■□□□□ 0.94
Trim39-203ENSMUST00000113706 Tnrc6bQ8BKI2 1810 aaKnown RBP20.9■□□□□ 0.94
Trim39-203ENSMUST00000113706 Znf316Q6PGE4 1016 aa20.9■□□□□ 0.94
Trim39-203ENSMUST00000113706 Uspl1Q3ULM6 1089 aa20.89■□□□□ 0.93
Trim39-203ENSMUST00000113706 Map4k4P97820 1233 aaKnown RBP20.88■□□□□ 0.93
Trim39-203ENSMUST00000113706 Rreb1Q3UH06 1700 aaKnown RBP20.88■□□□□ 0.93
Trim39-203ENSMUST00000113706 PtpruB1AUH1 1446 aa20.88■□□□□ 0.93
Trim39-203ENSMUST00000113706 Iqsec2Q5DU25 1478 aa20.88■□□□□ 0.93
Trim39-203ENSMUST00000113706 MyclP10166 368 aa20.87■□□□□ 0.93
Trim39-203ENSMUST00000113706 Ttc41Q692V3 1318 aa20.87■□□□□ 0.93
Trim39-203ENSMUST00000113706 Idi2Q8BFZ6 227 aa20.85■□□□□ 0.93
Trim39-203ENSMUST00000113706 Neurod2Q62414 383 aa20.85■□□□□ 0.93
Trim39-203ENSMUST00000113706 Kif1aP33173 1695 aa20.84■□□□□ 0.93
Trim39-203ENSMUST00000113706 Topaz1E5FYH1 1653 aa20.84■□□□□ 0.93
Trim39-203ENSMUST00000113706 Tsen2Q6P7W5 460 aa20.84■□□□□ 0.93
Trim39-203ENSMUST00000113706 Liat1Q810M6 228 aa20.84■□□□□ 0.93
Trim39-203ENSMUST00000113706 Ccdc30Q8BVF4 654 aa20.83■□□□□ 0.93
Trim39-203ENSMUST00000113706 Lmtk3Q5XJV6 1424 aa20.83■□□□□ 0.92
Trim39-203ENSMUST00000113706 D430041D05RikF6ZGR6 1678 aa20.82■□□□□ 0.92
Trim39-203ENSMUST00000113706 U2af1Q9D883 239 aaKnown RBP20.82■□□□□ 0.92
Trim39-203ENSMUST00000113706 N4bp2F8VQG7 1678 aaKnown RBP20.82■□□□□ 0.92
Trim39-203ENSMUST00000113706 Q3UJC8 639 aa20.82■□□□□ 0.92
Trim39-203ENSMUST00000113706 GphnQ8BUV3 769 aaKnown RBP20.82■□□□□ 0.92
Trim39-203ENSMUST00000113706 Plekhh1Q80TI1 1356 aa20.82■□□□□ 0.92
Trim39-203ENSMUST00000113706 Slc4a3P16283 1227 aa20.82■□□□□ 0.92
Trim39-203ENSMUST00000113706 Kif20bQ80WE4 1774 aaKnown RBP20.81■□□□□ 0.92
Trim39-203ENSMUST00000113706 Ralbp1Q62172 648 aa20.8■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms