RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Atad2bE9Q166 1460 aaKnown RBP14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Ppp2r3aB2RXC8 1150 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Zkscan2G3X952 960 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Dctn1O08788 1281 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 SkilQ60665 675 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Pnmal2G3X9N3 661 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Me1P06801 572 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Fyb1O35601 819 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Rpgrip1lQ8CG73 1264 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Vps8Q0P5W1 1427 aa14.94□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Sv2bQ8BG39 683 aa14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Nek4Q9Z1J2 792 aa14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Smarca2Q6DIC0 1577 aa14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Gnl3lQ6PGG6 577 aaKnown RBP14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Hoxa7P02830 229 aa14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Cdkn1cP49919 348 aa14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Smc2Q8CG48 1191 aaKnown RBP14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 KarsQ99MN1 595 aaKnown RBP14.93□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Cfdp1O88271 295 aaKnown RBP14.92□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Pank1Q8K4K6 548 aa14.91□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Ttll5Q8CHB8 1328 aa14.91□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Polr1aO35134 1717 aaKnown RBP14.91□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Pknox2Q8BG99 474 aa14.91□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Tubb6Q922F4 447 aa14.9□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Prdm16A2A935 1275 aa14.9□□□□□ -0.02
Ssh1-202ENSMUST00000112298 OptnQ8K3K8 584 aa14.9□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Tdrd9Q14BI7 1383 aa14.9□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Ppp4r3bQ922R5 820 aa14.9□□□□□ -0.02
Ssh1-202ENSMUST00000112298 Cttnbp2B9EJA2 1648 aa14.89□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Ttll13A4Q9F6 804 aa14.89□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Nop14Q8R3N1 860 aaKnown RBP14.89□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Smarca4Q3TKT4 1613 aaKnown RBP14.89□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Zkscan1Q8BGS3 561 aaKnown RBP14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Ipo4Q8VI75 1082 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Usp48Q3V0C5 1052 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Odf2lQ9D478 642 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Rab3gap2Q8BMG7 1366 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Pip4k2aO70172 405 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Gcc1Q9D4H2 778 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Cecr2E9Q2Z1 1453 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Jph4Q80WT0 628 aa14.87□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Soga1E1U8D0 1418 aa14.86□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Puf60Q3UEB3 564 aaKnown RBP14.86□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Rrp9Q91WM3 475 aaKnown RBP14.86□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Cavin4A2AMM0 362 aa14.86□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Ppm1eQ80TL0 749 aa14.86□□□□□ -0.03
Ssh1-202ENSMUST00000112298 FosbP13346 338 aa14.86□□□□□ -0.03
Ssh1-202ENSMUST00000112298 CalrP14211 416 aaKnown RBP14.85□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Nap1l1P28656 391 aaKnown RBP14.85□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Sycp1Q62209 993 aa14.85□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Tmco3Q8BH01 678 aa14.85□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Mphosph10Q810V0 681 aaKnown RBP14.84□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Rnf214Q8BFU3 668 aaKnown RBP14.84□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Ppm1fQ8CGA0 452 aa14.84□□□□□ -0.03
Ssh1-202ENSMUST00000112298 A0A0U1RNP2 1173 aa14.84□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Nectin2P32507 530 aa14.84□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Gtf2f1Q3THK3 508 aaKnown RBP14.84□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Fez1Q8K0X8 392 aa14.84□□□□□ -0.03
Ssh1-202ENSMUST00000112298 Prm3Q62100 101 aa14.83□□□□□ -0.04
Ssh1-202ENSMUST00000112298 TatQ8QZR1 454 aa14.83□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Q9D9S1 216 aa14.83□□□□□ -0.04
Ssh1-202ENSMUST00000112298 HypkQ9CR41 129 aa14.83□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Ift140E9PY46 1464 aa14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Rbm28Q8CGC6 750 aaKnown RBP14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Samd1D3YXK1 519 aa14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Ppp2r1aQ76MZ3 589 aa14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Eva1cP58659 440 aa14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Cep112Q5PR68 954 aa14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Tnpo1Q8BFY9 898 aaKnown RBP14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Gnai2P08752 355 aaKnown RBP14.82□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Phf14Q9D4H9 881 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Znf710Q3U288 666 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Pde4cQ3UEI1 686 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Prl7d1P04769 244 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Kiaa0753Q6A000 959 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Stk38Q91VJ4 465 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Zpr1Q62384 459 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Def6Q8C2K1 630 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Nphp1Q9QY53 687 aa14.81□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Eif3aP23116 1344 aaKnown RBP14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Luc7lQ9CYI4 371 aaKnown RBP14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Stk3Q9JI10 497 aa14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 TefQ9JLC6 301 aa14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Atp2b2Q9R0K7 1198 aa14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Nol12Q8BG17 217 aa14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Nat10Q8K224 1024 aaKnown RBP14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Paf1Q8K2T8 535 aa14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Nutm1Q8BHP2 1126 aa14.8□□□□□ -0.04
Ssh1-202ENSMUST00000112298 SelenooQ9DBC0 667 aa14.79□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Erlin2Q8BFZ9 340 aa14.79□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Ercc6lQ8BHK9 1240 aa14.79□□□□□ -0.04
Ssh1-202ENSMUST00000112298 PsapQ61207 557 aaKnown RBP14.79□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Agtpbp1Q641K1 1218 aa14.79□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Rhot2Q8JZN7 620 aa14.79□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Phldb2Q8K1N2 1249 aa14.78□□□□□ -0.04
Ssh1-202ENSMUST00000112298 BcanQ61361 883 aa14.78□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Fam13bQ8K2H3 851 aa14.78□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Myom3A2ABU4 1439 aa14.78□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Ccdc96Q9CR92 584 aa14.78□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Top2aQ01320 1528 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 1131.6 ms