RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 AppP12023 770 aa19.46■□□□□ 0.71
Ret-202ENSMUST00000088790 DroshaQ5HZJ0 1373 aaKnown RBP19.46■□□□□ 0.71
Ret-202ENSMUST00000088790 Smc4Q8CG47 1286 aa19.45■□□□□ 0.7
Ret-202ENSMUST00000088790 Cfdp1O88271 295 aaKnown RBP19.45■□□□□ 0.7
Ret-202ENSMUST00000088790 Rrp12Q6P5B0 1295 aaKnown RBP19.45■□□□□ 0.7
Ret-202ENSMUST00000088790 Phactr2B1AVP0 632 aa19.44■□□□□ 0.7
Ret-202ENSMUST00000088790 MpripP97434 1024 aa19.44■□□□□ 0.7
Ret-202ENSMUST00000088790 Glipr1l2Q9CQ35 332 aa19.44■□□□□ 0.7
Ret-202ENSMUST00000088790 Gtf3c3Q3TMP1 882 aa19.43■□□□□ 0.7
Ret-202ENSMUST00000088790 Thoc2B1AZI6 1594 aaKnown RBP19.43■□□□□ 0.7
Ret-202ENSMUST00000088790 Ddrgk1Q80WW9 315 aa19.43■□□□□ 0.7
Ret-202ENSMUST00000088790 HypkQ9CR41 129 aa19.42■□□□□ 0.7
Ret-202ENSMUST00000088790 Mcm2P97310 904 aa19.42■□□□□ 0.7
Ret-202ENSMUST00000088790 Tnpo1Q8BFY9 898 aaKnown RBP19.42■□□□□ 0.7
Ret-202ENSMUST00000088790 KinQ8K339 391 aa19.41■□□□□ 0.7
Ret-202ENSMUST00000088790 MsnP26041 577 aaKnown RBP19.41■□□□□ 0.7
Ret-202ENSMUST00000088790 Dnajc5bQ9CQ94 199 aa19.4■□□□□ 0.7
Ret-202ENSMUST00000088790 Ccer1Q9CQL2 403 aa19.4■□□□□ 0.7
Ret-202ENSMUST00000088790 Sf3a1Q8K4Z5 791 aaKnown RBP19.4■□□□□ 0.7
Ret-202ENSMUST00000088790 Cabp2Q9JLK4 216 aa19.4■□□□□ 0.7
Ret-202ENSMUST00000088790 Cyp46a1Q9WVK8 500 aa19.39■□□□□ 0.7
Ret-202ENSMUST00000088790 Fchsd2Q3USJ8 740 aa19.39■□□□□ 0.69
Ret-202ENSMUST00000088790 BC005561E9Q5E2 1589 aa19.38■□□□□ 0.69
Ret-202ENSMUST00000088790 Hmox1P14901 289 aa19.38■□□□□ 0.69
Ret-202ENSMUST00000088790 PalmQ9Z0P4 383 aa19.38■□□□□ 0.69
Ret-202ENSMUST00000088790 IbtkQ6ZPR6 1352 aaKnown RBP19.37■□□□□ 0.69
Ret-202ENSMUST00000088790 Nap1l3Q794H2 544 aa19.37■□□□□ 0.69
Ret-202ENSMUST00000088790 Atp10dQ8K2X1 1416 aa19.36■□□□□ 0.69
Ret-202ENSMUST00000088790 Fam135aQ6NS59 1506 aa19.36■□□□□ 0.69
Ret-202ENSMUST00000088790 Tpm3-rs7D3Z2H9 248 aa19.36■□□□□ 0.69
Ret-202ENSMUST00000088790 Map4k4P97820 1233 aaKnown RBP19.36■□□□□ 0.69
Ret-202ENSMUST00000088790 RdxP26043 583 aaKnown RBP19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 Bcl2l13P59017 434 aa19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 Q8C5K5 320 aa19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 Cspp1B2RX88 1205 aa19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 Erc2Q6PH08 957 aa19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 HnrnpmQ9D0E1 729 aaKnown RBP19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 TnnQ80Z71 1560 aa19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 Eif4g1Q6NZJ6 1600 aaKnown RBP19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 Tspyl2Q7TQI8 677 aa19.35■□□□□ 0.69
Ret-202ENSMUST00000088790 Gm10471E9Q1C7 252 aa19.34■□□□□ 0.69
Ret-202ENSMUST00000088790 Becn1O88597 448 aa19.34■□□□□ 0.69
Ret-202ENSMUST00000088790 Chmp4cQ9D7F7 232 aa19.34■□□□□ 0.69
Ret-202ENSMUST00000088790 Rnf20Q5DTM8 973 aa19.34■□□□□ 0.69
Ret-202ENSMUST00000088790 Zkscan2G3X952 960 aa19.33■□□□□ 0.69
Ret-202ENSMUST00000088790 Ddx11Q6AXC6 880 aa19.33■□□□□ 0.69
Ret-202ENSMUST00000088790 Cog6Q8R3I3 657 aa19.33■□□□□ 0.69
Ret-202ENSMUST00000088790 Kif18aQ91WD7 886 aa19.33■□□□□ 0.69
Ret-202ENSMUST00000088790 Disp1Q3TDN0 1521 aa19.33■□□□□ 0.69
Ret-202ENSMUST00000088790 Neurod6P48986 337 aa19.33■□□□□ 0.68
Ret-202ENSMUST00000088790 Sh3bgrQ9WUZ7 214 aa19.33■□□□□ 0.68
Ret-202ENSMUST00000088790 Cdc37l1Q9CZP7 335 aa19.33■□□□□ 0.68
Ret-202ENSMUST00000088790 Fancd2Q80V62 1450 aa19.32■□□□□ 0.68
Ret-202ENSMUST00000088790 VgfQ0VGU4 617 aa19.32■□□□□ 0.68
Ret-202ENSMUST00000088790 Camsap2Q8C1B1 1461 aa19.32■□□□□ 0.68
Ret-202ENSMUST00000088790 1700010I14RikQ7TPG0 532 aa19.32■□□□□ 0.68
Ret-202ENSMUST00000088790 Dnai2A2AC93 623 aa19.31■□□□□ 0.68
Ret-202ENSMUST00000088790 Mphosph10Q810V0 681 aaKnown RBP19.31■□□□□ 0.68
Ret-202ENSMUST00000088790 Gcc1Q9D4H2 778 aa19.31■□□□□ 0.68
Ret-202ENSMUST00000088790 Atxn3Q9CVD2 355 aa19.31■□□□□ 0.68
Ret-202ENSMUST00000088790 PxdnQ3UQ28 1475 aa19.31■□□□□ 0.68
Ret-202ENSMUST00000088790 Gnai2P08752 355 aaKnown RBP19.31■□□□□ 0.68
Ret-202ENSMUST00000088790 Smc3Q9CW03 1217 aaKnown RBP19.31■□□□□ 0.68
Ret-202ENSMUST00000088790 Pla2r1Q62028 1487 aa19.3■□□□□ 0.68
Ret-202ENSMUST00000088790 Dennd6aQ8BH65 605 aa19.29■□□□□ 0.68
Ret-202ENSMUST00000088790 Ush1cQ9ES64 910 aa19.29■□□□□ 0.68
Ret-202ENSMUST00000088790 Atp7aQ64430 1491 aa19.29■□□□□ 0.68
Ret-202ENSMUST00000088790 Gripap1Q8VD04 806 aa19.29■□□□□ 0.68
Ret-202ENSMUST00000088790 Stk11ipQ3TAA7 1072 aa19.29■□□□□ 0.68
Ret-202ENSMUST00000088790 Maco1Q7TQE6 664 aaKnown RBP19.29■□□□□ 0.68
Ret-202ENSMUST00000088790 Ggnbp2Q5SV77 696 aa19.28■□□□□ 0.68
Ret-202ENSMUST00000088790 PsapQ61207 557 aaKnown RBP19.28■□□□□ 0.68
Ret-202ENSMUST00000088790 Samd9lQ69Z37 1561 aa19.28■□□□□ 0.68
Ret-202ENSMUST00000088790 Atf3Q60765 181 aa19.28■□□□□ 0.68
Ret-202ENSMUST00000088790 Nphp1Q9QY53 687 aa19.28■□□□□ 0.68
Ret-202ENSMUST00000088790 PogkQ80TC5 607 aa19.27■□□□□ 0.68
Ret-202ENSMUST00000088790 AI481877A2ALV5 1481 aa19.27■□□□□ 0.68
Ret-202ENSMUST00000088790 Kif4P33174 1231 aa19.27■□□□□ 0.68
Ret-202ENSMUST00000088790 Gpatch11Q3UFS4 262 aa19.27■□□□□ 0.68
Ret-202ENSMUST00000088790 PhaxQ9JJT9 385 aaKnown RBP19.27■□□□□ 0.68
Ret-202ENSMUST00000088790 TmpoQ61033 693 aaKnown RBP19.27■□□□□ 0.67
Ret-202ENSMUST00000088790 Cplx2P84086 134 aa19.26■□□□□ 0.67
Ret-202ENSMUST00000088790 Smc5Q8CG46 1101 aaKnown RBP19.26■□□□□ 0.67
Ret-202ENSMUST00000088790 Ccdc47Q9D024 483 aaKnown RBP19.26■□□□□ 0.67
Ret-202ENSMUST00000088790 Fkbp4P30416 458 aa19.26■□□□□ 0.67
Ret-202ENSMUST00000088790 Zranb3Q6NZP1 1069 aa19.26■□□□□ 0.67
Ret-202ENSMUST00000088790 RalgapbQ8BQZ4 1484 aa19.26■□□□□ 0.67
Ret-202ENSMUST00000088790 Fmnl2A2APV2 1086 aa19.25■□□□□ 0.67
Ret-202ENSMUST00000088790 Utp3Q9JI13 469 aaKnown RBP19.25■□□□□ 0.67
Ret-202ENSMUST00000088790 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.25■□□□□ 0.67
Ret-202ENSMUST00000088790 Trappc8E9PWG2 1437 aa19.25■□□□□ 0.67
Ret-202ENSMUST00000088790 Kank1E9Q238 1360 aa19.25■□□□□ 0.67
Ret-202ENSMUST00000088790 Stk3Q9JI10 497 aa19.24■□□□□ 0.67
Ret-202ENSMUST00000088790 Cchcr1Q8K2I2 770 aa19.24■□□□□ 0.67
Ret-202ENSMUST00000088790 OvosQ3UU35 1456 aa19.24■□□□□ 0.67
Ret-202ENSMUST00000088790 Sptbn5F6UCX4 1208 aa19.23■□□□□ 0.67
Ret-202ENSMUST00000088790 Nol12Q8BG17 217 aa19.23■□□□□ 0.67
Ret-202ENSMUST00000088790 MvpQ9EQK5 861 aa19.23■□□□□ 0.67
Ret-202ENSMUST00000088790 Rapgef6Q5NCJ1 1609 aa19.23■□□□□ 0.67
Ret-202ENSMUST00000088790 NexnQ7TPW1 607 aa19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms