RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Rad54l2Q99NG0 1466 aa26.12■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Gnl3lQ6PGG6 577 aaKnown RBP26.12■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 UvssaQ9D479 717 aa26.12■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Hmgn5Q9JL35 406 aa26.11■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Nek4Q9Z1J2 792 aa26.11■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Gtf3c3Q3TMP1 882 aa26.1■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Kif3aP28741 701 aa26.1■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Mad1l1Q9WTX8 717 aaKnown RBP26.1■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Me1P06801 572 aa26.08■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Mcm2P97310 904 aa26.08■■□□□ 1.77
Smarcc1-201ENSMUST00000088716 Map3k5O35099 1380 aa26.08■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Ccdc183A2AJB1 534 aa26.07■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Ppp2r1aQ76MZ3 589 aa26.07■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 PogkQ80TC5 607 aa26.07■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Psma5Q9Z2U1 241 aaKnown RBP26.07■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Hnrnpul1Q8VDM6 859 aaKnown RBP26.07■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Arid4aF8VPQ2 1261 aaKnown RBP26.06■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Cfap99A0A140LIX9 648 aa26.06■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 HypkQ9CR41 129 aa26.06■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Urb2E9Q7L1 1524 aaKnown RBP26.06■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Ccdc34Q3UI66 367 aa26.05■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Rab3gap2Q8BMG7 1366 aa26.05■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 March6Q6ZQ89 909 aa26.05■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Trim29Q8R2Q0 587 aa26.05■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Pip4k2bQ80XI4 416 aa26.05■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Cavin4A2AMM0 362 aa26.04■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Taok2Q6ZQ29 1240 aa26.04■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Ints3Q7TPD0 1041 aaKnown RBP26.04■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Stk3Q9JI10 497 aa26.04■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 SkilQ60665 675 aa26.04■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Cc2d2aQ8CFW7 1633 aa26.03■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Q7TT23 1179 aa26.03■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 TefQ9JLC6 301 aa26.03■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Taf3Q5HZG4 932 aa26.02■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 ScribQ80U72 1612 aa26.02■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Fam193aQ8CGI1 1231 aaKnown RBP26.02■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Zkscan2G3X952 960 aa26.01■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Zranb3Q6NZP1 1069 aa26.01■■□□□ 1.76
Smarcc1-201ENSMUST00000088716 Arhgap31A6X8Z5 1425 aa26.01■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Wdr78E9PYY5 807 aa26.01■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Ubxn4Q8VCH8 506 aa26■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Myom3A2ABU4 1439 aa26■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Ppp2r3aB2RXC8 1150 aa25.99■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Usp48Q3V0C5 1052 aa25.99■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Ccdc173A0JLY1 547 aa25.99■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Smg7Q5RJH6 1138 aaKnown RBP25.99■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Naip1Q9QWK5 1403 aa25.99■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 MpripP97434 1024 aa25.99■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Dixdc1Q80Y83 711 aa25.98■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Cnnm1Q0GA42 951 aa25.97■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Nol12Q8BG17 217 aa25.97■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Gtf2f1Q3THK3 508 aaKnown RBP25.97■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Gcom1E9PZ54 550 aa25.96■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 MyzapQ3UIJ9 466 aa25.96■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Znhit6Q3UFB2 460 aaKnown RBP25.96■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Ttll13A4Q9F6 804 aa25.95■■□□□ 1.75
Smarcc1-201ENSMUST00000088716 Duox2A2AQ99 1517 aa25.94■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Lrrcc1Q69ZB0 1026 aa25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Fmnl2A2APV2 1086 aa25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Gm7298A0A0N4SVU1 1476 aa25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Necab1Q8BG18 352 aa25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 AnlnQ8K298 1121 aaKnown RBP25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Hap1O35668 628 aa25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Apaf1O88879 1249 aa25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 1700010I14RikQ7TPG0 532 aa25.93■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Gnai2P08752 355 aaKnown RBP25.92■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Abl1P00520 1123 aa25.92■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 EzrP26040 586 aaKnown RBP25.92■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Zrsr2Q62377 462 aaKnown RBP25.92■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Rbm28Q8CGC6 750 aaKnown RBP25.92■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Sf3b2Q3UJB0 878 aaKnown RBP25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Samd1D3YXK1 519 aa25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Fkbp4P30416 458 aa25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 OptnQ8K3K8 584 aa25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 NaspQ99MD9 773 aaKnown RBP25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Zfp444Q3TDV8 331 aaKnown RBP25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Agtpbp1Q641K1 1218 aa25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Odf2lQ9D478 642 aa25.91■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Evi5lH3BKQ3 813 aa25.9■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Nphp1Q9QY53 687 aa25.89■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Sytl4Q9R0Q1 673 aa25.89■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 NrkQ9R0G8 1455 aa25.89■■□□□ 1.74
Smarcc1-201ENSMUST00000088716 Dennd6aQ8BH65 605 aa25.89■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Slc4a2P13808 1237 aaKnown RBP25.89■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 PsapQ61207 557 aaKnown RBP25.89■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Ppp4r3bQ922R5 820 aa25.89■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Cabp2Q9JLK4 216 aa25.89■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Rbm5Q91YE7 815 aaKnown RBP25.88■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Arhgef5E9Q7D5 1581 aa25.88■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Paf1Q8K2T8 535 aa25.87■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Cdk19Q8BWD8 501 aa25.87■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Smc2Q8CG48 1191 aaKnown RBP25.87■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Stard3nlQ9DCI3 235 aa25.87■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 A0A0U1RNP2 1173 aa25.87■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Fbxo2Q80UW2 297 aa25.86■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Rufy1Q8BIJ7 712 aa25.86■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Znf710Q3U288 666 aa25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Gimap6Q8K349 305 aa25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Ccdc141E9Q8Q6 1531 aa25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Prl7d1P04769 244 aa25.85■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms