RNA–Protein interactions for RNA: ENSMUST00000075141.6

Trim17-202, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim17, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-202ENSMUST00000075141 Phf14Q9D4H9 881 aa11.7□□□□□ -0.54
Trim17-202ENSMUST00000075141 TimelessQ9R1X4 1197 aa11.69□□□□□ -0.54
Trim17-202ENSMUST00000075141 Adamts13Q769J6 1426 aa11.69□□□□□ -0.54
Trim17-202ENSMUST00000075141 Tbc1d32Q3URV1 1296 aa11.69□□□□□ -0.54
Trim17-202ENSMUST00000075141 Caskin1Q6P9K8 1431 aa11.69□□□□□ -0.54
Trim17-202ENSMUST00000075141 IbspQ61711 324 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Cog6Q8R3I3 657 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Tmc1Q8R4P5 757 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Rrp9Q91WM3 475 aaKnown RBP11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Dmrtc1Q9D9R7 182 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Trim44Q9QXA7 346 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Nectin2P32507 530 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Fmn2Q9JL04 1578 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 P2rx7Q9Z1M0 595 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Kif3bQ61771 747 aa11.68□□□□□ -0.54
Trim17-202ENSMUST00000075141 Neo1P97798 1493 aa11.67□□□□□ -0.54
Trim17-202ENSMUST00000075141 Terf2O35144 541 aa11.67□□□□□ -0.54
Trim17-202ENSMUST00000075141 Tsen2Q6P7W5 460 aa11.67□□□□□ -0.54
Trim17-202ENSMUST00000075141 Stag3O70576 1240 aa11.67□□□□□ -0.54
Trim17-202ENSMUST00000075141 Tmco5bQ80X59 307 aa11.66□□□□□ -0.54
Trim17-202ENSMUST00000075141 Sbno1Q689Z5 1390 aa11.66□□□□□ -0.54
Trim17-202ENSMUST00000075141 Q4VA45 678 aa11.66□□□□□ -0.54
Trim17-202ENSMUST00000075141 Rrbp1Q99PL5 1605 aaKnown RBP11.66□□□□□ -0.54
Trim17-202ENSMUST00000075141 Edc4Q3UJB9 1406 aaKnown RBP11.66□□□□□ -0.54
Trim17-202ENSMUST00000075141 Zranb1Q7M760 708 aa11.65□□□□□ -0.54
Trim17-202ENSMUST00000075141 Znf521Q6KAS7 1311 aa11.65□□□□□ -0.54
Trim17-202ENSMUST00000075141 Kif18aQ91WD7 886 aa11.65□□□□□ -0.54
Trim17-202ENSMUST00000075141 Nup160Q9Z0W3 1402 aaKnown RBP11.65□□□□□ -0.54
Trim17-202ENSMUST00000075141 Ccar1Q8CH18 1146 aaKnown RBP11.65□□□□□ -0.55
Trim17-202ENSMUST00000075141 Tfip11Q9ERA6 838 aaKnown RBP11.65□□□□□ -0.55
Trim17-202ENSMUST00000075141 Col17a1Q07563 1470 aa11.64□□□□□ -0.55
Trim17-202ENSMUST00000075141 Ccdc60Q8C4J0 545 aa11.64□□□□□ -0.55
Trim17-202ENSMUST00000075141 Kif2cQ922S8 721 aa11.64□□□□□ -0.55
Trim17-202ENSMUST00000075141 Clasp1Q80TV8 1535 aaKnown RBP11.64□□□□□ -0.55
Trim17-202ENSMUST00000075141 Tulp4Q9JIL5 1547 aa11.64□□□□□ -0.55
Trim17-202ENSMUST00000075141 Dusp27Q148W8 1138 aa11.63□□□□□ -0.55
Trim17-202ENSMUST00000075141 Maco1Q7TQE6 664 aaKnown RBP11.63□□□□□ -0.55
Trim17-202ENSMUST00000075141 Rbm10Q99KG3 930 aaKnown RBP11.63□□□□□ -0.55
Trim17-202ENSMUST00000075141 Adgrl2Q8JZZ7 1487 aa11.63□□□□□ -0.55
Trim17-202ENSMUST00000075141 Zmym3Q9JLM4 1370 aa11.62□□□□□ -0.55
Trim17-202ENSMUST00000075141 Atp1b4Q99ME6 356 aa11.62□□□□□ -0.55
Trim17-202ENSMUST00000075141 Erich6bQ9D4S6 220 aa11.62□□□□□ -0.55
Trim17-202ENSMUST00000075141 Map7O88735 730 aa11.61□□□□□ -0.55
Trim17-202ENSMUST00000075141 Atl3Q91YH5 541 aa11.61□□□□□ -0.55
Trim17-202ENSMUST00000075141 Stk26Q99JT2 416 aa11.61□□□□□ -0.55
Trim17-202ENSMUST00000075141 Puf60Q3UEB3 564 aaKnown RBP11.61□□□□□ -0.55
Trim17-202ENSMUST00000075141 Phlpp2Q8BXA7 1320 aa11.61□□□□□ -0.55
Trim17-202ENSMUST00000075141 Map4k4P97820 1233 aaKnown RBP11.6□□□□□ -0.55
Trim17-202ENSMUST00000075141 Fam208aQ69ZR9 1610 aaKnown RBP11.6□□□□□ -0.55
Trim17-202ENSMUST00000075141 Gm14025A2AP89 1413 aa11.6□□□□□ -0.55
Trim17-202ENSMUST00000075141 Kif20aP97329 887 aa11.6□□□□□ -0.55
Trim17-202ENSMUST00000075141 Rrp12Q6P5B0 1295 aaKnown RBP11.6□□□□□ -0.55
Trim17-202ENSMUST00000075141 PogkQ80TC5 607 aa11.6□□□□□ -0.55
Trim17-202ENSMUST00000075141 Abcc6Q9R1S7 1498 aa11.59□□□□□ -0.55
Trim17-202ENSMUST00000075141 Ccdc146E9Q9F7 977 aa11.59□□□□□ -0.55
Trim17-202ENSMUST00000075141 Fancd2Q80V62 1450 aa11.59□□□□□ -0.55
Trim17-202ENSMUST00000075141 Cald1E9QA15 768 aaKnown RBP11.58□□□□□ -0.56
Trim17-202ENSMUST00000075141 4933402E13RikQ9D4D2 429 aa11.58□□□□□ -0.56
Trim17-202ENSMUST00000075141 Exosc9Q9JHI7 438 aaKnown RBP11.58□□□□□ -0.56
Trim17-202ENSMUST00000075141 Ddit3P35639 168 aa11.57□□□□□ -0.56
Trim17-202ENSMUST00000075141 Plin1Q8CGN5 517 aa11.57□□□□□ -0.56
Trim17-202ENSMUST00000075141 Chmp4cQ9D7F7 232 aa11.57□□□□□ -0.56
Trim17-202ENSMUST00000075141 Nek4Q9Z1J2 792 aa11.57□□□□□ -0.56
Trim17-202ENSMUST00000075141 PtmaP26350 111 aa11.57□□□□□ -0.56
Trim17-202ENSMUST00000075141 Rsph3aQ3UFY4 516 aa11.57□□□□□ -0.56
Trim17-202ENSMUST00000075141 Nsd2Q8BVE8 1365 aa11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 AI481877A2ALV5 1481 aa11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 ErbinQ80TH2 1402 aa11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 Rbm25B2RY56 838 aaKnown RBP11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 G3bp1P97855 465 aaKnown RBP11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 SkilQ60665 675 aa11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 IbtkQ6ZPR6 1352 aaKnown RBP11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 Ythdc1E9Q5K9 736 aaKnown RBP11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 KnstrnQ9D9Z1 312 aaKnown RBP11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 Ppip5k1A2ARP1 1436 aa11.56□□□□□ -0.56
Trim17-202ENSMUST00000075141 Zcchc11B2RX14 1644 aaKnown RBP11.55□□□□□ -0.56
Trim17-202ENSMUST00000075141 Pdia4P08003 638 aaKnown RBP11.55□□□□□ -0.56
Trim17-202ENSMUST00000075141 Fam135bQ9DAI6 1403 aa11.55□□□□□ -0.56
Trim17-202ENSMUST00000075141 Kdm5aQ3UXZ9 1690 aa11.55□□□□□ -0.56
Trim17-202ENSMUST00000075141 Cep170Q6A065 1588 aa11.55□□□□□ -0.56
Trim17-202ENSMUST00000075141 Prdm16A2A935 1275 aa11.54□□□□□ -0.56
Trim17-202ENSMUST00000075141 Mast1Q9R1L5 1570 aa11.54□□□□□ -0.56
Trim17-202ENSMUST00000075141 Arid3cA6PWV5 409 aa11.54□□□□□ -0.56
Trim17-202ENSMUST00000075141 CastP51125 788 aa11.54□□□□□ -0.56
Trim17-202ENSMUST00000075141 Ttc21bQ0HA38 1315 aa11.53□□□□□ -0.56
Trim17-202ENSMUST00000075141 Myom2Q14BI5 1463 aa11.52□□□□□ -0.56
Trim17-202ENSMUST00000075141 Bloc1s4Q8VED2 215 aa11.52□□□□□ -0.56
Trim17-202ENSMUST00000075141 Chrna2Q91X60 512 aa11.52□□□□□ -0.56
Trim17-202ENSMUST00000075141 Tbc1d9Q3UYK3 1264 aa11.52□□□□□ -0.57
Trim17-202ENSMUST00000075141 Brd1E9PZ26 1189 aaKnown RBP11.52□□□□□ -0.57
Trim17-202ENSMUST00000075141 IqubQ8CDK3 788 aa11.52□□□□□ -0.57
Trim17-202ENSMUST00000075141 Dhx16G3X8X0 1044 aaKnown RBP11.51□□□□□ -0.57
Trim17-202ENSMUST00000075141 U2surpQ6NV83 1029 aaKnown RBP11.51□□□□□ -0.57
Trim17-202ENSMUST00000075141 Cfap65Q3V0B4 1847 aa11.51□□□□□ -0.57
Trim17-202ENSMUST00000075141 1700019A02RikA0A087WPV9 146 aa11.51□□□□□ -0.57
Trim17-202ENSMUST00000075141 Scaf11E9PZM7 1456 aaKnown RBP11.51□□□□□ -0.57
Trim17-202ENSMUST00000075141 Irf5P56477 497 aa11.5□□□□□ -0.57
Trim17-202ENSMUST00000075141 Myo3aQ8K3H5 1613 aa11.5□□□□□ -0.57
Trim17-202ENSMUST00000075141 Pola1P33609 1465 aa11.49□□□□□ -0.57
Trim17-202ENSMUST00000075141 Usp54Q8BL06 1588 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms