RNA–Protein interactions for RNA: ENSMUST00000074002.11

Ube3b-201, Transcript of Ubiquitin-protein ligase E3B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube3b, Length 5,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3b-201ENSMUST00000074002 Tmco5bQ80X59 307 aa17.14■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Znf608Q56A10 1511 aa17.14■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Mast1Q9R1L5 1570 aa17.14■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Cdk19Q8BWD8 501 aa17.13■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Ttll13A4Q9F6 804 aa17.11■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Abcc6Q9R1S7 1498 aa17.11■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Rbm10Q99KG3 930 aaKnown RBP17.1■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Znf330Q922H9 316 aa17.09■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Gli2Q0VGT2 1544 aa17.09■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Cabp4Q8VHC5 271 aa17.09■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Stk31Q99MW1 1018 aa17.09■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Senp3Q9EP97 568 aaKnown RBP17.09■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Lamc1P02468 1607 aaKnown RBP17.08■□□□□ 0.33
Ube3b-201ENSMUST00000074002 Paxip1Q6NZQ4 1056 aa17.08■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Ppip5k1A2ARP1 1436 aa17.08■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Cul7Q8VE73 1689 aa17.08■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Gtf3c5Q8R2T8 520 aa17.08■□□□□ 0.32
Ube3b-201ENSMUST00000074002 TimelessQ9R1X4 1197 aa17.07■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Map7O88735 730 aa17.07■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Znf518aB2RRF6 1478 aaKnown RBP17.07■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Plekhh1Q80TI1 1356 aa17.07■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Ak7Q9D2H2 614 aa17.06■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Ciz1Q8VEH2 845 aa17.05■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Ptch1Q61115 1434 aa17.05■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Cald1E9QA15 768 aaKnown RBP17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Ccdc60Q8C4J0 545 aa17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Mfap1aC0HKD8 439 aaKnown RBP17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Mfap1bC0HKD9 439 aaKnown RBP17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 PtprtQ99M80 1454 aa17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Rnf17Q99MV7 1640 aa17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Cluap1Q8R3P7 413 aa17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Edc4Q3UJB9 1406 aaKnown RBP17.04■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Apaf1O88879 1249 aa17.02■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Gm21190A0A0G2JGJ6 266 aa17.02■□□□□ 0.32
Ube3b-201ENSMUST00000074002 Egfem1Q8C088 590 aa17.02■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Phf14Q9D4H9 881 aa17.02■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Ush1cQ9ES64 910 aa17.01■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Becn1O88597 448 aa17.01■□□□□ 0.31
Ube3b-201ENSMUST00000074002 HnrnpmQ9D0E1 729 aaKnown RBP17.01■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Talpid3E9PV87 1520 aa17.01■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Q3TQI7 289 aaKnown RBP17.01■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Trim58Q5NCC9 485 aa17.01■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Usp54Q8BL06 1588 aaKnown RBP17.01■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Prkrip1Q9CWV6 186 aaKnown RBP17■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Adgrl3Q80TS3 1537 aa17■□□□□ 0.31
Ube3b-201ENSMUST00000074002 L3mbtl2P59178 703 aa17■□□□□ 0.31
Ube3b-201ENSMUST00000074002 HnrnpuQ8VEK3 800 aaKnown RBP17■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Pibf1E9Q6K3 756 aa17■□□□□ 0.31
Ube3b-201ENSMUST00000074002 G3bp1P97855 465 aaKnown RBP16.99■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Swt1Q9DBQ9 907 aa16.99■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Znf326O88291 580 aa16.98■□□□□ 0.31
Ube3b-201ENSMUST00000074002 AatkQ80YE4 1365 aa16.98■□□□□ 0.31
Ube3b-201ENSMUST00000074002 KnstrnQ9D9Z1 312 aaKnown RBP16.98■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Kif1bQ60575 1816 aaKnown RBP16.97■□□□□ 0.31
Ube3b-201ENSMUST00000074002 IbtkQ6ZPR6 1352 aaKnown RBP16.97■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Cep170Q6A065 1588 aa16.97■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Cavin4A2AMM0 362 aa16.96■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Tpm2P58774 284 aa16.96■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Setd1bQ8CFT2 1985 aa16.96■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Fam43aQ8BUP8 424 aa16.96■□□□□ 0.31
Ube3b-201ENSMUST00000074002 Vgll3P85442 326 aa16.95■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Setbp1Q9Z180 1582 aa16.95■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Tnnt1O88346 262 aa16.95■□□□□ 0.3
Ube3b-201ENSMUST00000074002 NhsB1AV60 1647 aa16.95■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Pank1Q8K4K6 548 aa16.94■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Gpatch11Q3UFS4 262 aa16.94■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Sbno1Q689Z5 1390 aa16.94■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Tarbp1E9Q368 1579 aa16.94■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Dot1lQ6XZL8 1540 aa16.94■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Rbm25B2RY56 838 aaKnown RBP16.94■□□□□ 0.3
Ube3b-201ENSMUST00000074002 InsrP15208 1372 aa16.93■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Kiaa0754Q69ZZ9 979 aa16.93■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Pprc1Q6NZN1 1644 aa16.93■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Gnai1B2RSH2 354 aa16.93■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Gnai3Q9DC51 354 aa16.93■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Fyb1O35601 819 aa16.92■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Dusp27Q148W8 1138 aa16.92■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Abcc3B2RX12 1523 aa16.92■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Kif14L0N7N1 1674 aaKnown RBP16.92■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Casc1Q6TDU8 730 aa16.91■□□□□ 0.3
Ube3b-201ENSMUST00000074002 GphnQ8BUV3 769 aaKnown RBP16.91■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Trpm2Q91YD4 1506 aa16.91■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Map4k4P97820 1233 aaKnown RBP16.91■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Prrc2bQ7TPM1 1486 aaKnown RBP16.91■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Uggt2E9Q4X2 1504 aa16.9■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Hecw1Q8K4P8 1604 aa16.9■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Nos1Q9Z0J4 1429 aa16.89■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Adam1bQ8R534 806 aa16.89■□□□□ 0.3
Ube3b-201ENSMUST00000074002 Gm32742A0A1B0GT42 1604 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Abca8bQ8K440 1620 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Zmym4A2A791 1549 aaKnown RBP16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Synj2Q9D2G5 1434 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Pdia4P08003 638 aaKnown RBP16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Rab11fip3Q8CHD8 1047 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Usp16Q99LG0 825 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Mbd5B1AYB6 1498 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 PalldQ9ET54 1408 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Zranb1Q7M760 708 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Nphp4P59240 1425 aa16.89■□□□□ 0.29
Ube3b-201ENSMUST00000074002 Q3UJC8 639 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms