RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Ssh1Q76I79 1042 aa13.3□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Kif3cO35066 796 aa13.3□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Rnf20Q5DTM8 973 aa13.3□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Trim58Q5NCC9 485 aa13.3□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Cep112Q5PR68 954 aa13.3□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Gigyf1Q99MR1 1044 aaKnown RBP13.3□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Me1P06801 572 aa13.29□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 DmtnQ9WV69 405 aa13.29□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Anapc15-psA0A140T8L6 141 aa13.29□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Rpgrip1lQ8CG73 1264 aa13.29□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Rock1P70335 1354 aa13.29□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Rad54l2Q99NG0 1466 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 CrcpO35427 148 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Lamb3Q61087 1168 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Gm42641I6L9G2 585 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Kcnj4P52189 445 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 AtripQ8BMG1 785 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Cabp4Q8VHC5 271 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Cers3Q1A3B0 383 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Cnnm3Q32NY4 713 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Golga3P55937 1487 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Kif7B7ZNG0 1348 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Ccdc30Q8BVF4 654 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Cep89Q9CZX2 791 aa13.28□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Tax1bp1Q3UKC1 814 aaKnown RBP13.27□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Usp16Q99LG0 825 aa13.27□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Ccdc18Q640L5 1455 aa13.27□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Znf710Q3U288 666 aa13.27□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Bag1Q60739 355 aa13.27□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Eif5P59325 429 aaKnown RBP13.27□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Cfap58B2RW38 873 aa13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Serpina10Q8R121 448 aa13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Sytl4Q9R0Q1 673 aa13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Nop14Q8R3N1 860 aaKnown RBP13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Cpa2Q504N0 417 aa13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Cfap99A0A140LIX9 648 aa13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 TnmdQ9EP64 317 aa13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Hap1O35668 628 aa13.26□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Fez1Q8K0X8 392 aa13.25□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Mctp1E9PV86 951 aa13.25□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Nbr1P97432 988 aa13.25□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Samm50Q8BGH2 469 aa13.25□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Ppm1fQ8CGA0 452 aa13.25□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Syce3B5KM66 88 aa13.25□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 OptnQ8K3K8 584 aa13.25□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Baz1bQ9Z277 1479 aa13.24□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Ppp2r3aB2RXC8 1150 aa13.24□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Kif27Q7M6Z4 1394 aa13.24□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Prkrip1Q9CWV6 186 aaKnown RBP13.24□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Cyp46a1Q9WVK8 500 aa13.23□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Rbm28Q8CGC6 750 aaKnown RBP13.23□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Ssr1Q9CY50 286 aaKnown RBP13.23□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 PdcQ9QW08 244 aa13.23□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Cfdp1O88271 295 aaKnown RBP13.23□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Gnl2Q99LH1 728 aaKnown RBP13.22□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Abcd1P48410 736 aa13.22□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Utp14aQ640M1 767 aaKnown RBP13.22□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Larp1Q6ZQ58 1072 aaKnown RBP13.22□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Fyco1Q8VDC1 1437 aa13.22□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Exoc8Q6PGF7 716 aa13.22□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Kiaa0753Q6A000 959 aa13.21□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Spag5Q7TME2 1165 aa13.21□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Ciz1Q8VEH2 845 aa13.21□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Chrna2Q91X60 512 aa13.21□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Ints3Q7TPD0 1041 aaKnown RBP13.21□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Stk38Q91VJ4 465 aa13.21□□□□□ -0.29
Gtf3c1-201ENSMUST00000055506 Prpf4bQ61136 1007 aaKnown RBP13.21□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Q7TT23 1179 aa13.2□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Tmx4Q8C0L0 335 aa13.2□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Cog6Q8R3I3 657 aa13.2□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Trim29Q8R2Q0 587 aa13.2□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 PhaxQ9JJT9 385 aaKnown RBP13.2□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Kif3bQ61771 747 aa13.2□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Usp47Q8BY87 1376 aa13.2□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Nup155Q99P88 1391 aaKnown RBP13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Jakmip1Q8BVL9 626 aa13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Zbtb22Q9Z0G7 638 aa13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Mink1Q9JM52 1308 aa13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Ercc3P49135 783 aa13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Zkscan1Q8BGS3 561 aaKnown RBP13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 TxlnbQ8VBT1 685 aa13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Erlin2Q8BFZ9 340 aa13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Smc4Q8CG47 1286 aa13.19□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Ccdc83Q9D4V3 305 aa13.18□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Atl3Q91YH5 541 aa13.18□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Eif3aP23116 1344 aaKnown RBP13.18□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Dydc1Q9D9T0 175 aa13.18□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Otud6bQ8K2H2 294 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 SkilQ60665 675 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Arhgap35Q91YM2 1499 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Dusp27Q148W8 1138 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Smc2Q8CG48 1191 aaKnown RBP13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Erc2Q6PH08 957 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 NexnQ7TPW1 607 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Atp2b2Q9R0K7 1198 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Usp40Q8BWR4 1235 aa13.17□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Tfip11Q9ERA6 838 aaKnown RBP13.16□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Cchcr1Q8K2I2 770 aa13.16□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 CenpjQ569L8 1344 aa13.16□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Arglu1Q3UL36 271 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms