RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Cnga1P29974 684 aa30.76■■■□□ 2.52
Cln6-201ENSMUST00000034776 Eif2ak4Q9QZ05 1648 aa30.76■■■□□ 2.51
Cln6-201ENSMUST00000034776 P3h3Q8CG70 732 aa30.74■■■□□ 2.51
Cln6-201ENSMUST00000034776 KdrP35918 1367 aa30.73■■■□□ 2.51
Cln6-201ENSMUST00000034776 Q9D9H8 365 aa30.73■■■□□ 2.51
Cln6-201ENSMUST00000034776 Cep170bQ80U49 1574 aa30.73■■■□□ 2.51
Cln6-201ENSMUST00000034776 Gm38655A0A286YDK6 273 aa30.73■■■□□ 2.51
Cln6-201ENSMUST00000034776 Zfp444Q3TDV8 331 aaKnown RBP30.71■■■□□ 2.51
Cln6-201ENSMUST00000034776 L3mbtl2P59178 703 aa30.7■■■□□ 2.5
Cln6-201ENSMUST00000034776 Esx1O88933 382 aa30.69■■■□□ 2.5
Cln6-201ENSMUST00000034776 PplQ9R269 1755 aa30.68■■■□□ 2.5
Cln6-201ENSMUST00000034776 Plekhg1F6S200 1446 aa30.68■■■□□ 2.5
Cln6-201ENSMUST00000034776 Utp14aQ640M1 767 aaKnown RBP30.64■■■□□ 2.5
Cln6-201ENSMUST00000034776 Kank1E9Q238 1360 aa30.63■■■□□ 2.49
Cln6-201ENSMUST00000034776 Chd2E9PZM4 1827 aaKnown RBP30.63■■■□□ 2.49
Cln6-201ENSMUST00000034776 Nrxn1Q9CS84 1514 aa30.62■■■□□ 2.49
Cln6-201ENSMUST00000034776 Mink1Q9JM52 1308 aa30.61■■■□□ 2.49
Cln6-201ENSMUST00000034776 Dip2aQ8BWT5 1523 aa30.6■■■□□ 2.49
Cln6-201ENSMUST00000034776 Abca14E9Q8F8 1683 aa30.6■■■□□ 2.49
Cln6-201ENSMUST00000034776 Exosc9Q9JHI7 438 aaKnown RBP30.59■■■□□ 2.49
Cln6-201ENSMUST00000034776 Nlrp6Q91WS2 869 aa30.59■■■□□ 2.49
Cln6-201ENSMUST00000034776 Gemin5Q8BX17 1502 aaKnown RBP30.57■■■□□ 2.48
Cln6-201ENSMUST00000034776 Atp2b2Q9R0K7 1198 aa30.56■■■□□ 2.48
Cln6-201ENSMUST00000034776 Scaf11E9PZM7 1456 aaKnown RBP30.56■■■□□ 2.48
Cln6-201ENSMUST00000034776 NktrP30415 1453 aa30.55■■■□□ 2.48
Cln6-201ENSMUST00000034776 Erbb3Q61526 1339 aa30.55■■■□□ 2.48
Cln6-201ENSMUST00000034776 Gsto1O09131 240 aa30.55■■■□□ 2.48
Cln6-201ENSMUST00000034776 Prdm10Q3UTQ7 1184 aa30.55■■■□□ 2.48
Cln6-201ENSMUST00000034776 Psme1P97371 249 aa30.53■■■□□ 2.48
Cln6-201ENSMUST00000034776 Rad21Q61550 635 aaKnown RBP30.53■■■□□ 2.48
Cln6-201ENSMUST00000034776 Zranb1Q7M760 708 aa30.53■■■□□ 2.48
Cln6-201ENSMUST00000034776 Kiaa1107Q80TK0 1369 aa30.52■■■□□ 2.48
Cln6-201ENSMUST00000034776 CenpbP27790 599 aa30.52■■■□□ 2.48
Cln6-201ENSMUST00000034776 Asxl2Q8BZ32 1370 aa30.52■■■□□ 2.48
Cln6-201ENSMUST00000034776 Txndc2Q6P902 515 aa30.52■■■□□ 2.48
Cln6-201ENSMUST00000034776 Cdk19Q8BWD8 501 aa30.52■■■□□ 2.48
Cln6-201ENSMUST00000034776 Cald1E9QA15 768 aaKnown RBP30.5■■■□□ 2.47
Cln6-201ENSMUST00000034776 Upf2A2AT37 1269 aaKnown RBP30.5■■■□□ 2.47
Cln6-201ENSMUST00000034776 Kif16bB1AVY7 1312 aa30.49■■■□□ 2.47
Cln6-201ENSMUST00000034776 IbtkQ6ZPR6 1352 aaKnown RBP30.49■■■□□ 2.47
Cln6-201ENSMUST00000034776 Nwd1A6H603 1563 aa30.49■■■□□ 2.47
Cln6-201ENSMUST00000034776 CrbnQ8C7D2 445 aa30.47■■■□□ 2.47
Cln6-201ENSMUST00000034776 Usp19Q3UJD6 1360 aa30.47■■■□□ 2.47
Cln6-201ENSMUST00000034776 Adgrl1Q80TR1 1466 aa30.47■■■□□ 2.47
Cln6-201ENSMUST00000034776 Safb2Q80YR5 991 aaKnown RBP30.46■■■□□ 2.47
Cln6-201ENSMUST00000034776 IghaA0A0A6YXW6 389 aa30.44■■■□□ 2.46
Cln6-201ENSMUST00000034776 P2rx7Q9Z1M0 595 aa30.44■■■□□ 2.46
Cln6-201ENSMUST00000034776 Plppr3Q7TPB0 716 aa30.44■■■□□ 2.46
Cln6-201ENSMUST00000034776 Ttc41Q692V3 1318 aa30.42■■■□□ 2.46
Cln6-201ENSMUST00000034776 FanciQ8K368 1330 aa30.42■■■□□ 2.46
Cln6-201ENSMUST00000034776 Slit3Q9WVB4 1523 aa30.4■■■□□ 2.46
Cln6-201ENSMUST00000034776 Golga2Q921M4 999 aa30.4■■■□□ 2.46
Cln6-201ENSMUST00000034776 Map4k4P97820 1233 aaKnown RBP30.37■■■□□ 2.45
Cln6-201ENSMUST00000034776 Uspl1Q3ULM6 1089 aa30.37■■■□□ 2.45
Cln6-201ENSMUST00000034776 GsdmaQ9EST1 446 aa30.37■■■□□ 2.45
Cln6-201ENSMUST00000034776 Dip2bQ3UH60 1574 aa30.36■■■□□ 2.45
Cln6-201ENSMUST00000034776 NinlQ6ZQ12 1394 aa30.34■■■□□ 2.45
Cln6-201ENSMUST00000034776 Anp32aO35381 247 aa30.33■■■□□ 2.45
Cln6-201ENSMUST00000034776 Cps1Q8C196 1500 aa30.32■■■□□ 2.44
Cln6-201ENSMUST00000034776 Speer4f1Q9D5Q6 258 aa30.32■■■□□ 2.44
Cln6-201ENSMUST00000034776 Map3k19E9Q3S4 1311 aa30.31■■■□□ 2.44
Cln6-201ENSMUST00000034776 PzpQ61838 1495 aa30.29■■■□□ 2.44
Cln6-201ENSMUST00000034776 Wdr43Q6ZQL4 677 aaKnown RBP30.29■■■□□ 2.44
Cln6-201ENSMUST00000034776 Usp32F8VPZ3 1604 aa30.26■■■□□ 2.43
Cln6-201ENSMUST00000034776 Ralbp1Q62172 648 aa30.26■■■□□ 2.43
Cln6-201ENSMUST00000034776 Ccdc30Q8BVF4 654 aa30.26■■■□□ 2.43
Cln6-201ENSMUST00000034776 Pik3r4Q8VD65 1358 aa30.26■■■□□ 2.43
Cln6-201ENSMUST00000034776 Arap3Q8R5G7 1538 aa30.24■■■□□ 2.43
Cln6-201ENSMUST00000034776 Plekhh1Q80TI1 1356 aa30.23■■■□□ 2.43
Cln6-201ENSMUST00000034776 Iqsec2Q5DU25 1478 aa30.23■■■□□ 2.43
Cln6-201ENSMUST00000034776 Ppp4r2Q0VGB7 417 aa30.22■■■□□ 2.43
Cln6-201ENSMUST00000034776 Idi2Q8BFZ6 227 aa30.22■■■□□ 2.43
Cln6-201ENSMUST00000034776 Nolc1E9Q5C9 702 aaKnown RBP30.21■■■□□ 2.43
Cln6-201ENSMUST00000034776 HnrnpmQ9D0E1 729 aaKnown RBP30.21■■■□□ 2.43
Cln6-201ENSMUST00000034776 PtpruB1AUH1 1446 aa30.21■■■□□ 2.43
Cln6-201ENSMUST00000034776 Pik3c2bE9QAN8 1632 aa30.2■■■□□ 2.43
Cln6-201ENSMUST00000034776 Neurod2Q62414 383 aa30.2■■■□□ 2.42
Cln6-201ENSMUST00000034776 Tsen2Q6P7W5 460 aa30.2■■■□□ 2.42
Cln6-201ENSMUST00000034776 Bcl9Q9D219 1425 aa30.19■■■□□ 2.42
Cln6-201ENSMUST00000034776 Pcdh10E9PXQ7 1057 aa30.19■■■□□ 2.42
Cln6-201ENSMUST00000034776 Tnrc6bQ8BKI2 1810 aaKnown RBP30.18■■■□□ 2.42
Cln6-201ENSMUST00000034776 4930407I10RikD3Z5T8 1512 aa30.17■■■□□ 2.42
Cln6-201ENSMUST00000034776 Kcnh8P59111 1102 aa30.17■■■□□ 2.42
Cln6-201ENSMUST00000034776 Ncbp3Q8BZR9 615 aaKnown RBP30.16■■■□□ 2.42
Cln6-201ENSMUST00000034776 U2af1Q9D883 239 aaKnown RBP30.16■■■□□ 2.42
Cln6-201ENSMUST00000034776 Sirt1Q923E4 737 aa30.16■■■□□ 2.42
Cln6-201ENSMUST00000034776 Lmtk3Q5XJV6 1424 aa30.13■■■□□ 2.41
Cln6-201ENSMUST00000034776 Rwdd1Q9CQK7 243 aa30.11■■■□□ 2.41
Cln6-201ENSMUST00000034776 Trim28Q62318 834 aa30.11■■■□□ 2.41
Cln6-201ENSMUST00000034776 Znf316Q6PGE4 1016 aa30.1■■■□□ 2.41
Cln6-201ENSMUST00000034776 Apaf1O88879 1249 aa30.1■■■□□ 2.41
Cln6-201ENSMUST00000034776 CatipB9EKE5 520 aa30.08■■■□□ 2.41
Cln6-201ENSMUST00000034776 Prkrip1Q9CWV6 186 aaKnown RBP30.08■■■□□ 2.41
Cln6-201ENSMUST00000034776 Q3UJC8 639 aa30.07■■■□□ 2.4
Cln6-201ENSMUST00000034776 TnikP83510 1323 aa30.07■■■□□ 2.4
Cln6-201ENSMUST00000034776 Tcerg1Q8CGF7 1100 aaKnown RBP30.07■■■□□ 2.4
Cln6-201ENSMUST00000034776 Rreb1Q3UH06 1700 aaKnown RBP30.06■■■□□ 2.4
Cln6-201ENSMUST00000034776 Kif1aP33173 1695 aa30.06■■■□□ 2.4
Cln6-201ENSMUST00000034776 GphnQ8BUV3 769 aaKnown RBP30.06■■■□□ 2.4
Cln6-201ENSMUST00000034776 NeflP08551 543 aa30.05■■■□□ 2.4
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms