RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Tnpo1Q8BFY9 898 aaKnown RBP24.68■■□□□ 1.54
Tram1-201ENSMUST00000027068 Abcc3B2RX12 1523 aa24.68■■□□□ 1.54
Tram1-201ENSMUST00000027068 Ppp1r3fQ9JIG4 799 aa24.67■■□□□ 1.54
Tram1-201ENSMUST00000027068 Tmc1Q8R4P5 757 aa24.66■■□□□ 1.54
Tram1-201ENSMUST00000027068 Ppp2r3aB2RXC8 1150 aa24.66■■□□□ 1.54
Tram1-201ENSMUST00000027068 GsdmaQ9EST1 446 aa24.66■■□□□ 1.54
Tram1-201ENSMUST00000027068 Htatsf1Q8BGC0 757 aa24.65■■□□□ 1.54
Tram1-201ENSMUST00000027068 Itsn2Q9Z0R6 1659 aa24.65■■□□□ 1.54
Tram1-201ENSMUST00000027068 ErbinQ80TH2 1402 aa24.65■■□□□ 1.54
Tram1-201ENSMUST00000027068 Sptbn5F6UCX4 1208 aa24.65■■□□□ 1.54
Tram1-201ENSMUST00000027068 Hecw1Q8K4P8 1604 aa24.64■■□□□ 1.54
Tram1-201ENSMUST00000027068 Pdcl3Q8BVF2 240 aa24.64■■□□□ 1.54
Tram1-201ENSMUST00000027068 Ttc21bQ0HA38 1315 aa24.64■■□□□ 1.53
Tram1-201ENSMUST00000027068 Abcc1O35379 1528 aa24.62■■□□□ 1.53
Tram1-201ENSMUST00000027068 AnkarA2RT91 1465 aa24.62■■□□□ 1.53
Tram1-201ENSMUST00000027068 Atp10dQ8K2X1 1416 aa24.62■■□□□ 1.53
Tram1-201ENSMUST00000027068 Ylpm1Q9R0I7 1386 aaKnown RBP24.62■■□□□ 1.53
Tram1-201ENSMUST00000027068 Map4k4P97820 1233 aaKnown RBP24.62■■□□□ 1.53
Tram1-201ENSMUST00000027068 Puf60Q3UEB3 564 aaKnown RBP24.61■■□□□ 1.53
Tram1-201ENSMUST00000027068 Myo3aQ8K3H5 1613 aa24.61■■□□□ 1.53
Tram1-201ENSMUST00000027068 Uggt2E9Q4X2 1504 aa24.6■■□□□ 1.53
Tram1-201ENSMUST00000027068 Ecm2Q5FW85 670 aa24.59■■□□□ 1.53
Tram1-201ENSMUST00000027068 U2af1Q9D883 239 aaKnown RBP24.59■■□□□ 1.53
Tram1-201ENSMUST00000027068 Stag3O70576 1240 aa24.58■■□□□ 1.53
Tram1-201ENSMUST00000027068 Mfap1aC0HKD8 439 aaKnown RBP24.58■■□□□ 1.53
Tram1-201ENSMUST00000027068 Mfap1bC0HKD9 439 aaKnown RBP24.58■■□□□ 1.53
Tram1-201ENSMUST00000027068 Stard8Q8K031 1019 aa24.57■■□□□ 1.52
Tram1-201ENSMUST00000027068 Znf608Q56A10 1511 aa24.57■■□□□ 1.52
Tram1-201ENSMUST00000027068 Dnttip2Q8R2M2 758 aaKnown RBP24.56■■□□□ 1.52
Tram1-201ENSMUST00000027068 IbtkQ6ZPR6 1352 aaKnown RBP24.55■■□□□ 1.52
Tram1-201ENSMUST00000027068 Gprasp1Q5U4C1 1347 aa24.55■■□□□ 1.52
Tram1-201ENSMUST00000027068 DmtnQ9WV69 405 aa24.55■■□□□ 1.52
Tram1-201ENSMUST00000027068 Myom2Q14BI5 1463 aa24.54■■□□□ 1.52
Tram1-201ENSMUST00000027068 Rabep1O35551 862 aa24.54■■□□□ 1.52
Tram1-201ENSMUST00000027068 Znf330Q922H9 316 aa24.54■■□□□ 1.52
Tram1-201ENSMUST00000027068 Nphp4P59240 1425 aa24.54■■□□□ 1.52
Tram1-201ENSMUST00000027068 AatkQ80YE4 1365 aa24.54■■□□□ 1.52
Tram1-201ENSMUST00000027068 Tsen2Q6P7W5 460 aa24.53■■□□□ 1.52
Tram1-201ENSMUST00000027068 Cald1E9QA15 768 aaKnown RBP24.52■■□□□ 1.52
Tram1-201ENSMUST00000027068 Myom1Q62234 1667 aaKnown RBP24.52■■□□□ 1.52
Tram1-201ENSMUST00000027068 NhsB1AV60 1647 aa24.52■■□□□ 1.52
Tram1-201ENSMUST00000027068 Tbc1d32Q3URV1 1296 aa24.52■■□□□ 1.52
Tram1-201ENSMUST00000027068 Xrn1P97789 1719 aaKnown RBP24.52■■□□□ 1.52
Tram1-201ENSMUST00000027068 Kidins220E9Q9B7 1793 aa24.52■■□□□ 1.52
Tram1-201ENSMUST00000027068 Scaf11E9PZM7 1456 aaKnown RBP24.49■■□□□ 1.51
Tram1-201ENSMUST00000027068 Fam135bQ9DAI6 1403 aa24.49■■□□□ 1.51
Tram1-201ENSMUST00000027068 AU019823E9PUQ3 292 aa24.49■■□□□ 1.51
Tram1-201ENSMUST00000027068 Ccar1Q8CH18 1146 aaKnown RBP24.49■■□□□ 1.51
Tram1-201ENSMUST00000027068 Catsper2A2ARP9 588 aa24.48■■□□□ 1.51
Tram1-201ENSMUST00000027068 Zranb1Q7M760 708 aa24.48■■□□□ 1.51
Tram1-201ENSMUST00000027068 Abca17E9PX95 1733 aa24.48■■□□□ 1.51
Tram1-201ENSMUST00000027068 Plppr3Q7TPB0 716 aa24.48■■□□□ 1.51
Tram1-201ENSMUST00000027068 Antxr1Q9CZ52 562 aa24.48■■□□□ 1.51
Tram1-201ENSMUST00000027068 Dusp27Q148W8 1138 aa24.47■■□□□ 1.51
Tram1-201ENSMUST00000027068 Chrna2Q91X60 512 aa24.47■■□□□ 1.51
Tram1-201ENSMUST00000027068 Gtf2a1Q99PM3 378 aa24.47■■□□□ 1.51
Tram1-201ENSMUST00000027068 Arid3cA6PWV5 409 aa24.47■■□□□ 1.51
Tram1-201ENSMUST00000027068 Cep152A2AUM9 1736 aaKnown RBP24.46■■□□□ 1.51
Tram1-201ENSMUST00000027068 AU015836B2RUM3 263 aa24.46■■□□□ 1.51
Tram1-201ENSMUST00000027068 Myo5cE9Q1F5 1742 aa24.45■■□□□ 1.5
Tram1-201ENSMUST00000027068 Abca8bQ8K440 1620 aa24.45■■□□□ 1.5
Tram1-201ENSMUST00000027068 Iqsec2Q5DU25 1478 aa24.44■■□□□ 1.5
Tram1-201ENSMUST00000027068 Gtf3c5Q8R2T8 520 aa24.44■■□□□ 1.5
Tram1-201ENSMUST00000027068 Atl3Q91YH5 541 aa24.43■■□□□ 1.5
Tram1-201ENSMUST00000027068 Talpid3E9PV87 1520 aa24.43■■□□□ 1.5
Tram1-201ENSMUST00000027068 Cdk5rap2Q8K389 1822 aa24.42■■□□□ 1.5
Tram1-201ENSMUST00000027068 Nutm1Q8BHP2 1126 aa24.42■■□□□ 1.5
Tram1-201ENSMUST00000027068 Lemd3Q9WU40 921 aa24.42■■□□□ 1.5
Tram1-201ENSMUST00000027068 Abca6Q8K441 1624 aa24.42■■□□□ 1.5
Tram1-201ENSMUST00000027068 Kif2cQ922S8 721 aa24.41■■□□□ 1.5
Tram1-201ENSMUST00000027068 Phlpp2Q8BXA7 1320 aa24.4■■□□□ 1.5
Tram1-201ENSMUST00000027068 Aplp1Q03157 653 aa24.4■■□□□ 1.5
Tram1-201ENSMUST00000027068 Rims1Q99NE5 1463 aa24.4■■□□□ 1.5
Tram1-201ENSMUST00000027068 Ssh1Q76I79 1042 aa24.39■■□□□ 1.5
Tram1-201ENSMUST00000027068 Stk26Q99JT2 416 aa24.39■■□□□ 1.49
Tram1-201ENSMUST00000027068 Senp3Q9EP97 568 aaKnown RBP24.39■■□□□ 1.49
Tram1-201ENSMUST00000027068 Iqgap3F8VQ29 1632 aa24.39■■□□□ 1.49
Tram1-201ENSMUST00000027068 Maco1Q7TQE6 664 aaKnown RBP24.38■■□□□ 1.49
Tram1-201ENSMUST00000027068 Ccdc60Q8C4J0 545 aa24.38■■□□□ 1.49
Tram1-201ENSMUST00000027068 AU022751B1B0V2 589 aa24.37■■□□□ 1.49
Tram1-201ENSMUST00000027068 Terf2O35144 541 aa24.37■■□□□ 1.49
Tram1-201ENSMUST00000027068 IqubQ8CDK3 788 aa24.37■■□□□ 1.49
Tram1-201ENSMUST00000027068 Cog6Q8R3I3 657 aa24.37■■□□□ 1.49
Tram1-201ENSMUST00000027068 Exosc9Q9JHI7 438 aaKnown RBP24.37■■□□□ 1.49
Tram1-201ENSMUST00000027068 Kiaa1210E9Q0C6 1637 aa24.36■■□□□ 1.49
Tram1-201ENSMUST00000027068 Plcb2A3KGF7 1181 aa24.36■■□□□ 1.49
Tram1-201ENSMUST00000027068 Kif18aQ91WD7 886 aa24.36■■□□□ 1.49
Tram1-201ENSMUST00000027068 Rfx1P48377 963 aa24.36■■□□□ 1.49
Tram1-201ENSMUST00000027068 Mcm4P49717 862 aa24.36■■□□□ 1.49
Tram1-201ENSMUST00000027068 Nos1Q9Z0J4 1429 aa24.34■■□□□ 1.49
Tram1-201ENSMUST00000027068 Il4rP16382 810 aa24.34■■□□□ 1.49
Tram1-201ENSMUST00000027068 Nectin2P32507 530 aa24.34■■□□□ 1.49
Tram1-201ENSMUST00000027068 Nsfl1cQ9CZ44 370 aaKnown RBP24.34■■□□□ 1.49
Tram1-201ENSMUST00000027068 CastP51125 788 aa24.33■■□□□ 1.49
Tram1-201ENSMUST00000027068 Fndc1E9Q043 1732 aa24.33■■□□□ 1.49
Tram1-201ENSMUST00000027068 Efcab6Q6P1E8 1516 aa24.33■■□□□ 1.49
Tram1-201ENSMUST00000027068 IbspQ61711 324 aa24.32■■□□□ 1.48
Tram1-201ENSMUST00000027068 Map7O88735 730 aa24.31■■□□□ 1.48
Tram1-201ENSMUST00000027068 Abca8aQ8K442 1620 aa24.31■■□□□ 1.48
Tram1-201ENSMUST00000027068 Atp1b4Q99ME6 356 aa24.3■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms